mRNA_P-wetherbeei_contig9921.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: D8LTV2_ECTSI ((R)-citramalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV2_ECTSI) HSP 1 Score: 227 bits (578), Expect = 1.280e-68 Identity = 114/149 (76.51%), Postives = 126/149 (84.56%), Query Frame = 1 Query: 13 KTVQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 459 +TV++YDTTLRDGTQMEGIS SV DKLKI +L FGMHYIEGGWPGSNPKD EFFERAR++LP E+W R+VAFGSTRRK ACA D QL +L++AGT CVTIVAKAWDLHVD ILEV REENLAMV ESV LK A +EVML LEHFF Sbjct: 43 RTVEMYDTTLRDGTQMEGISASVLDKLKIALQLHHFGMHYIEGGWPGSNPKDVEFFERARKELPAEAWERVVAFGSTRRKFKACAEDKQLESLISAGTGCVTIVAKAWDLHVDHILEVPREENLAMVRESVEHLKMAGKEVMLDLEHFF 191
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A836CCG4_9STRA ((R)-citramalate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCG4_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.590e-66 Identity = 115/162 (70.99%), Postives = 126/162 (77.78%), Query Frame = 1 Query: 7 PTKTVQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIV-----------AFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 459 P + V +YDTTLRDGTQMEGISVSV+DKLKI L +FGMHYIEGGWPGSNPKD EFFERA+ + PP+ W+RI AFGSTRRK C D QLA L+AAGT CVTIVAKAWDLHVD ILEV REENLAMV ESVAFLKAA +EVM+ LEHFF Sbjct: 30 PPRLVDIYDTTLRDGTQMEGISVSVDDKLKIARVLSNFGMHYIEGGWPGSNPKDAEFFERAKAEPPPDVWSRIAEXXXXXXXXXAAFGSTRRKNSTCEQDKQLATLIAAGTNCVTIVAKAWDLHVDHILEVPREENLAMVGESVAFLKAAGKEVMIDLEHFF 191
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A6V1Q1T2_HETAK ((R)-citramalate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q1T2_HETAK) HSP 1 Score: 195 bits (495), Expect = 3.790e-56 Identity = 100/153 (65.36%), Postives = 115/153 (75.16%), Query Frame = 1 Query: 1 GTPTKTVQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 459 G K + +YDTTLRDGTQ E +SV+V+ KL I RL FGM YIEGGWPGSNPKD EFF RAR +LP +W R+VAFGSTRRK + D Q+A LL + CV IV K+WDLH+D ILEV REENLAMV++SVA LKAA REVML LEHFF Sbjct: 75 GLSAKHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFF 227
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: L1JY85_GUITC ((R)-citramalate synthase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JY85_GUITC) HSP 1 Score: 189 bits (480), Expect = 1.540e-54 Identity = 90/147 (61.22%), Postives = 116/147 (78.91%), Query Frame = 1 Query: 19 VQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 459 V+ YDTTLRDG Q EGIS+S +DKL+I +RL FG+ YIEGGWPGSNPKD EFFERA+ +LPP +W+++ AFGSTR K + D Q+ L+ +G R VT+V K+WDLHVD++LE SREENLAM+ ++V++LK+ REVML EHFF Sbjct: 23 VRYYDTTLRDGAQGEGISLSCDDKLRIASRLHRFGVDYIEGGWPGSNPKDAEFFERAKVELPPAAWDKVAAFGSTRYKNVKVEDDKQVKMLVDSGARVVTLVGKSWDLHVDQVLETSREENLAMIFDTVSYLKSLGREVMLDAEHFF 169
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A7S0F219_9CRYP ((R)-citramalate synthase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F219_9CRYP) HSP 1 Score: 187 bits (476), Expect = 2.890e-54 Identity = 89/147 (60.54%), Postives = 115/147 (78.23%), Query Frame = 1 Query: 19 VQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 459 V+ YDTTLRDG Q EGIS+S +DKL+I RL FG+ YIEGGWPGSNPKD EFFERA+ +LPP +W+++ AFGSTR K + D Q+ L+ +G R VT+V K+WDLHVD++LE SREENLAM+ ++V++LK+ REVML EHF+ Sbjct: 116 VRYYDTTLRDGAQGEGISLSCDDKLRIAARLHRFGVDYIEGGWPGSNPKDAEFFERAKVELPPAAWDKVAAFGSTRYKNVKVEDDKQVKMLVDSGARVVTLVGKSWDLHVDQVLETSREENLAMIFDTVSYLKSLGREVMLDAEHFY 262
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A7S4L4M6_GUITH ((R)-citramalate synthase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L4M6_GUITH) HSP 1 Score: 189 bits (480), Expect = 9.700e-54 Identity = 90/147 (61.22%), Postives = 116/147 (78.91%), Query Frame = 1 Query: 19 VQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 459 V+ YDTTLRDG Q EGIS+S +DKL+I +RL FG+ YIEGGWPGSNPKD EFFERA+ +LPP +W+++ AFGSTR K + D Q+ L+ +G R VT+V K+WDLHVD++LE SREENLAM+ ++V++LK+ REVML EHFF Sbjct: 111 VRYYDTTLRDGAQGEGISLSCDDKLRIASRLHRFGVDYIEGGWPGSNPKDAEFFERAKVELPPAAWDKVAAFGSTRYKNVKVEDDKQVKMLVDSGARVVTLVGKSWDLHVDQVLETSREENLAMIFDTVSYLKSLGREVMLDAEHFF 257
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A7S1HAV1_HEMAN ((R)-citramalate synthase (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HAV1_HEMAN) HSP 1 Score: 178 bits (451), Expect = 5.070e-53 Identity = 86/145 (59.31%), Postives = 107/145 (73.79%), Query Frame = 1 Query: 25 LYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 459 YDTTLRDG Q EG+S+S +DKL+I RL SFG HYIEGGWPGSNPKD EFF RA+ +LPP +W ++ AFGSTR K D Q+ L+ + R VT+V KAWDLHVD +LE +REEN+AM+ ++V +LK REVML EH+F Sbjct: 19 FYDTTLRDGAQGEGMSLSCDDKLRIAARLHSFGAHYIEGGWPGSNPKDAEFFRRAKEELPPAAWAKVAAFGSTRYKGKKVEEDAQVQMLVDSDARVVTLVGKAWDLHVDVVLETTREENVAMIRDTVKYLKDMGREVMLDAEHYF 163
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A7S2UWY3_9STRA ((R)-citramalate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWY3_9STRA) HSP 1 Score: 186 bits (473), Expect = 6.370e-53 Identity = 92/146 (63.01%), Postives = 113/146 (77.40%), Query Frame = 1 Query: 19 VQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHF 456 V++YDTTLRDGTQ E ISVSV KL+I RL FG+HYIEGGWPGSNPKD+EFFERA+ +L PE+ ++ AFGSTRRK A D Q+AAL+ +G C+ +V K+ D HVD+ILEV REENLAMV +S+ +LK +EVML LEHF Sbjct: 92 VEIYDTTLRDGTQAESISVSVEGKLRIAERLAEFGVHYIEGGWPGSNPKDKEFFERAKTELSPEARTKLTAFGSTRRKFKKAAEDSQIAALVDSGVDCICLVGKSSDFHVDKILEVPREENLAMVHDSIHYLKGLGKEVMLDLEHF 237
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A2V7MMB9_9BACT ((R)-citramalate synthase (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7MMB9_9BACT) HSP 1 Score: 163 bits (412), Expect = 7.450e-48 Identity = 85/145 (58.62%), Postives = 104/145 (71.72%), Query Frame = 1 Query: 25 LYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 459 LYDTTLRDGTQ EG+S+SV+DKLKI RL G+HY+EGGWPGSNPKD EFF R R++ ++ +I AFG TRR C DP L ALL A T VT+V K+ LHV+R+LE SR+ENL M+SESV + + REV+ EHFF Sbjct: 3 LYDTTLRDGTQREGLSLSVDDKLKIARRLDELGIHYLEGGWPGSNPKDAEFFRRIRQEGLGQA--KIAAFGMTRRANGRCEDDPNLTALLEAETPVVTLVGKSSTLHVERVLETSRDENLRMISESVGYFRRRGREVIYDAEHFF 145
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A3M1EAS4_9CHLR ((R)-citramalate synthase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EAS4_9CHLR) HSP 1 Score: 170 bits (431), Expect = 1.100e-47 Identity = 87/148 (58.78%), Postives = 107/148 (72.30%), Query Frame = 1 Query: 16 TVQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 459 T+ LYDTTLRDGTQ EGIS+S +DKLKI RL FG+HYIEGGWPGSNPKD EFFER + ++ +I AFGSTR K C D + AL+ A T VT+V K+WDLHVD +LE R+ENLAM+++SVA+ K +EV+ EHFF Sbjct: 3 TIYLYDTTLRDGTQREGISLSCDDKLKIARRLDEFGIHYIEGGWPGSNPKDAEFFERVKSLNLKQA--KIAAFGSTRYKNTPCEEDANIRALVEADTPVVTLVGKSWDLHVDVVLEADRDENLAMIADSVAYFKRMGKEVIYDAEHFF 148 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9921.1.1 >prot_P-wetherbeei_contig9921.1.1 ID=prot_P-wetherbeei_contig9921.1.1|Name=mRNA_P-wetherbeei_contig9921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp GTPTKTVQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPback to top mRNA from alignment at P-wetherbeei_contig9921:1..901- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9921.1.1 ID=mRNA_P-wetherbeei_contig9921.1.1|Name=mRNA_P-wetherbeei_contig9921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=901bp|location=Sequence derived from alignment at P-wetherbeei_contig9921:1..901- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9921:1..901- >mRNA_P-wetherbeei_contig9921.1.1 ID=mRNA_P-wetherbeei_contig9921.1.1|Name=mRNA_P-wetherbeei_contig9921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig9921:1..901- (Phaeothamnion wetherbeei SAG_119_79)back to top |