Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1963 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 1962 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683187113.2158403-CDS-P-wetherbeei_contig985:6183..8145 | 1683187113.2158403-CDS-P-wetherbeei_contig985:6183..8145 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig985 6184..8145 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig985.4.1 >prot_P-wetherbeei_contig985.4.1 ID=prot_P-wetherbeei_contig985.4.1|Name=mRNA_P-wetherbeei_contig985.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=654bp
PTSASAPPSPGASSLAAKAQDAVPIITAAKASVAVDARTPATAAMAATAA
VAATALAATVAAAAPRAEAKPVMPVAGVGAAAVGPSYAACQLSSSGCGAV
AEGNSAGHERSASAPAAAEGGSVGSAGKAQDNDGSAAVAVETKLTAKNTK
TVNPGDGDDAGDGIVGGSGGSNGSSGAIGPGAPPQQTANRDASEASGRRW
RLGKRSTSGEWGTAADKPVDTSPTRTLVRRNSVDSAVAAPMAFVTYAAAR
GAIVPLLPPPSPGLARAASFGWRDDLRARGGGGGGGGGGIASDVWVERPH
GSAGRPAAGKEATPRLPMQTASGGVDAVSLAIKDSGSRDKRGSQDENETA
GAADASGAVAVAAGAACWDAGTGEHPITAPSEGSSEWDGCDASCCRAGRA
GARCDSGETRPDGGRLSSGDGDWERNGACGRESGGDDRAGGDGGHGDGGY
DGCCCAHDGCHRGYDGGYSGAYGGAYGDGSDGAFVGCGGGGGGADGYRGA
EEERFLLRDLCLRLESEVAKLRNIVACQAGCLQSSPAVSAGLGLISGAGG
GYGAAAAAAAAAAAAAAAAATTAAQHAPRLSSLVIPEHRHVAWEAMSDDG
QGLLTWQRHAQFGGAGCGHNSGSAGGGGGFASFRPTAPPFIPEQFPASAS
EDGR back to topmRNA from alignment at P-wetherbeei_contig985:6184..8145+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig985.4.1 ID=mRNA_P-wetherbeei_contig985.4.1|Name=mRNA_P-wetherbeei_contig985.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1962bp|location=Sequence derived from alignment at P-wetherbeei_contig985:6184..8145+ (Phaeothamnion wetherbeei SAG_119_79)
CCGACATCTGCGTCAGCACCACCGTCGCCAGGCGCGTCTTCGCTGGCGGC
GAAGGCGCAGGATGCCGTCCCGATCATTACAGCGGCTAAGGCATCGGTGG
CGGTGGATGCACGTACGCCGGCAACAGCAGCGATGGCGGCGACGGCGGCG
GTTGCTGCGACGGCGTTGGCGGCGACAGTGGCGGCAGCAGCGCCACGAGC
AGAGGCCAAGCCAGTAATGCCGGTGGCCGGCGTCGGCGCCGCTGCCGTGG
GGCCATCATATGCTGCCTGTCAGCTTTCCAGCAGCGGCTGCGGCGCCGTT
GCGGAAGGAAACAGCGCCGGCCACGAGCGGTCCGCGAGCGCGCCTGCGGC
CGCGGAAGGAGGGAGCGTCGGCTCAGCAGGCAAGGCACAGGACAATGATG
GTTCAGCTGCTGTGGCTGTGGAGACCAAACTCACCGCGAAAAACACCAAA
ACTGTGAATCCTGGAGATGGCGACGACGCTGGCGACGGCATCGTCGGTGG
CAGCGGTGGCAGCAACGGCAGCAGCGGAGCCATCGGCCCGGGCGCCCCGC
CGCAGCAGACCGCTAACAGGGACGCCAGCGAAGCTTCAGGACGGCGCTGG
CGGCTCGGCAAGCGCTCCACGTCGGGGGAGTGGGGGACGGCGGCGGACAA
GCCGGTAGACACGTCGCCGACGCGGACTCTGGTCCGCCGCAACAGCGTCG
ACAGCGCGGTGGCAGCGCCTATGGCGTTCGTCACCTACGCGGCCGCCCGC
GGTGCAATCGTGCCGCTGCTCCCGCCTCCGTCACCCGGACTGGCTCGGGC
CGCCAGCTTTGGCTGGCGAGATGACCTAAGGGCGAGGGGTGGGGGCGGCG
GCGGCGGCGGCGGCGGTATTGCTTCCGACGTCTGGGTGGAAAGGCCACAC
GGTTCGGCCGGCCGGCCGGCAGCGGGCAAAGAGGCGACGCCGCGCCTGCC
CATGCAGACGGCGAGCGGCGGTGTCGATGCCGTCAGCCTTGCTATCAAGG
ACAGCGGCAGCCGTGACAAACGAGGCTCTCAGGACGAGAACGAGACTGCC
GGTGCCGCCGATGCTTCCGGTGCCGTCGCCGTGGCAGCCGGTGCGGCGTG
TTGGGATGCTGGGACCGGCGAACACCCGATTACTGCTCCGAGCGAGGGCA
GCAGCGAATGGGATGGCTGCGATGCCAGCTGCTGCCGCGCCGGCAGAGCT
GGCGCTCGCTGCGACAGCGGCGAAACTAGGCCCGATGGCGGCCGATTGAG
CAGCGGCGATGGCGACTGGGAGCGCAACGGCGCGTGCGGCCGGGAAAGCG
GCGGCGACGACCGCGCTGGCGGCGACGGCGGGCATGGGGACGGGGGATAT
GACGGGTGCTGCTGTGCGCATGACGGCTGCCATCGCGGTTATGATGGCGG
TTACAGCGGCGCTTACGGCGGCGCTTACGGCGACGGCAGTGACGGCGCAT
TTGTCGGGTGCGGCGGCGGCGGTGGCGGGGCAGACGGCTACCGCGGGGCG
GAGGAAGAGCGGTTCCTGTTGCGTGATCTCTGCTTGCGACTGGAATCGGA
AGTCGCAAAGCTCAGAAATATTGTCGCCTGCCAGGCTGGGTGCCTCCAGT
CGTCGCCGGCGGTCTCTGCGGGACTGGGACTCATTTCGGGCGCCGGAGGC
GGGTACGGGGCGGCTGCCGCAGCTGCGGCAGCGGCTGCGGCTGCTGCTGC
AGCGGCAGCCACGACGGCTGCTCAGCACGCGCCTCGATTGTCGTCGCTGG
TGATCCCGGAGCACCGCCACGTTGCGTGGGAAGCGATGAGCGACGACGGA
CAGGGGCTGCTGACCTGGCAACGTCACGCGCAGTTTGGCGGCGCCGGCTG
TGGGCACAATAGTGGCAGCGCTGGCGGCGGCGGCGGCTTTGCATCGTTCC
GGCCAACGGCGCCGCCGTTCATCCCTGAACAGTTCCCCGCTTCGGCGTCC
GAAGACGGGAGA back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig985:6184..8145+ >mRNA_P-wetherbeei_contig985.4.1 ID=mRNA_P-wetherbeei_contig985.4.1|Name=mRNA_P-wetherbeei_contig985.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1962bp|location=Sequence derived from alignment at P-wetherbeei_contig985:6184..8145+ (Phaeothamnion wetherbeei SAG_119_79)
CCGACATCTGCGTCAGCACCACCGTCGCCAGGCGCGTCTTCGCTGGCGGC
GAAGGCGCAGGATGCCGTCCCGATCATTACAGCGGCTAAGGCATCGGTGG
CGGTGGATGCACGTACGCCGGCAACAGCAGCGATGGCGGCGACGGCGGCG
GTTGCTGCGACGGCGTTGGCGGCGACAGTGGCGGCAGCAGCGCCACGAGC
AGAGGCCAAGCCAGTAATGCCGGTGGCCGGCGTCGGCGCCGCTGCCGTGG
GGCCATCATATGCTGCCTGTCAGCTTTCCAGCAGCGGCTGCGGCGCCGTT
GCGGAAGGAAACAGCGCCGGCCACGAGCGGTCCGCGAGCGCGCCTGCGGC
CGCGGAAGGAGGGAGCGTCGGCTCAGCAGGCAAGGCACAGGACAATGATG
GTTCAGCTGCTGTGGCTGTGGAGACCAAACTCACCGCGAAAAACACCAAA
ACTGTGAATCCTGGAGATGGCGACGACGCTGGCGACGGCATCGTCGGTGG
CAGCGGTGGCAGCAACGGCAGCAGCGGAGCCATCGGCCCGGGCGCCCCGC
CGCAGCAGACCGCTAACAGGGACGCCAGCGAAGCTTCAGGACGGCGCTGG
CGGCTCGGCAAGCGCTCCACGTCGGGGGAGTGGGGGACGGCGGCGGACAA
GCCGGTAGACACGTCGCCGACGCGGACTCTGGTCCGCCGCAACAGCGTCG
ACAGCGCGGTGGCAGCGCCTATGGCGTTCGTCACCTACGCGGCCGCCCGC
GGTGCAATCGTGCCGCTGCTCCCGCCTCCGTCACCCGGACTGGCTCGGGC
CGCCAGCTTTGGCTGGCGAGATGACCTAAGGGCGAGGGGTGGGGGCGGCG
GCGGCGGCGGCGGCGGTATTGCTTCCGACGTCTGGGTGGAAAGGCCACAC
GGTTCGGCCGGCCGGCCGGCAGCGGGCAAAGAGGCGACGCCGCGCCTGCC
CATGCAGACGGCGAGCGGCGGTGTCGATGCCGTCAGCCTTGCTATCAAGG
ACAGCGGCAGCCGTGACAAACGAGGCTCTCAGGACGAGAACGAGACTGCC
GGTGCCGCCGATGCTTCCGGTGCCGTCGCCGTGGCAGCCGGTGCGGCGTG
TTGGGATGCTGGGACCGGCGAACACCCGATTACTGCTCCGAGCGAGGGCA
GCAGCGAATGGGATGGCTGCGATGCCAGCTGCTGCCGCGCCGGCAGAGCT
GGCGCTCGCTGCGACAGCGGCGAAACTAGGCCCGATGGCGGCCGATTGAG
CAGCGGCGATGGCGACTGGGAGCGCAACGGCGCGTGCGGCCGGGAAAGCG
GCGGCGACGACCGCGCTGGCGGCGACGGCGGGCATGGGGACGGGGGATAT
GACGGGTGCTGCTGTGCGCATGACGGCTGCCATCGCGGTTATGATGGCGG
TTACAGCGGCGCTTACGGCGGCGCTTACGGCGACGGCAGTGACGGCGCAT
TTGTCGGGTGCGGCGGCGGCGGTGGCGGGGCAGACGGCTACCGCGGGGCG
GAGGAAGAGCGGTTCCTGTTGCGTGATCTCTGCTTGCGACTGGAATCGGA
AGTCGCAAAGCTCAGAAATATTGTCGCCTGCCAGGCTGGGTGCCTCCAGT
CGTCGCCGGCGGTCTCTGCGGGACTGGGACTCATTTCGGGCGCCGGAGGC
GGGTACGGGGCGGCTGCCGCAGCTGCGGCAGCGGCTGCGGCTGCTGCTGC
AGCGGCAGCCACGACGGCTGCTCAGCACGCGCCTCGATTGTCGTCGCTGG
TGATCCCGGAGCACCGCCACGTTGCGTGGGAAGCGATGAGCGACGACGGA
CAGGGGCTGCTGACCTGGCAACGTCACGCGCAGTTTGGCGGCGCCGGCTG
TGGGCACAATAGTGGCAGCGCTGGCGGCGGCGGCGGCTTTGCATCGTTCC
GGCCAACGGCGCCGCCGTTCATCCCTGAACAGTTCCCCGCTTCGGCGTCC
GAAGACGGGAGA back to top
|