mRNA_P-wetherbeei_contig8297.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A835ZGW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW1_9STRA) HSP 1 Score: 340 bits (871), Expect = 6.970e-107 Identity = 176/312 (56.41%), Postives = 218/312 (69.87%), Query Frame = 1
Query: 4 VDRELWQLSSPSYQRVTWLPNKFNHGTLGSIGVANFGYVGVESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPADGGGFILSLDYIKVYRTQLEPEFIYVSSASMPP----GAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNN------------------APGGIQAIRLQQDKQDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
+DRELW L + R+ W PNKF+HGTLG +GV G + VES L LN+G FSG V+R LGDGK Y++I+RT LY G+QFE+ +QT+PN+W THRLPFS FE + G + G LDRR+++Q+ VAY R P+D G FI+SLD+IKVYRTQLEPEFIYVSSA++PP G + L+ D KAY SA GE LR+S LTYTIVR+ G+NN APGGIQAI++QQD+ +GLISRAD AEI V+ LLDPRACNLAFYASQ K+APTAI+P++D+S ARMRPNT
Sbjct: 596 MDRELWSLGKEA-ARLKWAPNKFDHGTLGGVGVQELGDLSVESPKLDLNMGAFSGLVVRLLGDGKQYRIILRTKLYEMNGVQFESVVQTKPNKWQTHRLPFSTFEAHVGGTNIEGAQQVRLDRRDVKQIAVAYRRAPSDDGTFIVSLDFIKVYRTQLEPEFIYVSSAAVPPFEGRGVHEYDDTVLAQLQARDKKAYWSAMGENALRKS-LTYTIVRVAGFNNXXXXXXXXXXXXXXXXXXAPGGIQAIKMQQDQDGVGLISRADAAEICVSCLLDPRACNLAFYASQSKYAPTAISPDKDMSAELARMRPNT 905
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: D7G0B1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B1_ECTSI) HSP 1 Score: 315 bits (808), Expect = 6.130e-102 Identity = 151/291 (51.89%), Postives = 199/291 (68.38%), Query Frame = 1
Query: 1 QVDRELWQLSSPSYQRVTWLPNKFNHGTLGSIGVANFGYVGVESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPADGGGFILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
+ DRELW + S Q W NKF +GT GS + GY VESQ + LNL FSG +R GDGK Y+ I+R Y GIQFE IQT+PN+W THRLPFS F+ Y G++V E+ +DR ++QQL + Y R P D FILSL ++KVYRTQ+EPEFIYVSSA +PP ++ L+ PK Y +ARGE++LR+SGLTYTI+R++G+NN PGGIQAI ++QD +++ +SRAD AEI V LLDPRACNLA Y + + AP+A NP++ ++T +R+RPNT
Sbjct: 200 EADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEENGIQFETVIQTKPNKWQTHRLPFSAFDAYLYGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILSLHFVKVYRTQIEPEFIYVSSAGVPPMTDSNYDRILDTLKHESPKCYYNARGEELLRKSGLTYTIIRVEGFNNLPGGIQAIEIKQDPENVSKVSRADAAEITVQCLLDPRACNLALYTTTARQAPSAANPDQKMTTQLSRLRPNT 490
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A5J4Z1C0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1C0_PORPP) HSP 1 Score: 188 bits (478), Expect = 3.570e-52 Identity = 113/293 (38.57%), Postives = 163/293 (55.63%), Query Frame = 1
Query: 46 RVTWLPNKFNHGTLGSIGVANFGYVGVESQPLGL---NLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGEL-VSGESTAALDRRNIQQLGVAYYRRP----ADGGGFILSLDYIKVYRTQLEPEFIYVSSASMPP-----GAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDK----QDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
RV+ N +G L +G Y GV L L NL FSG ++R +GDG Y++ ++ SAG+ + A+ +T+ ++W T RLPFS F D ++ + LDR NIQ + + Y + + G F L++DYIK YRTQ EP+F+ +S+A + A + A+ DP R E+ LR SGLTY IVR +N A GG + + +QD+ + + +SRAD+AE+ V SLLDPRACN++F A +G FAPTA +DLS +F R+RPNT
Sbjct: 267 RVSLFMNDKGNGVL--VGKVFEKYNGVAQAVLKLDQPNLKGFSGVILRVIGDGNTYRIALQCGSTQSAGVSYVASFKTEKSKWATIRLPFSSFIAMSDKQMNLRVRDAEELDRTNIQSIALQYTKSQDNPEKESGDFYLAVDYIKAYRTQEEPDFVLLSTAQLTEKGFTHNAGDLSVPAMADGEQPDPALLAKWRAEEALRNSGLTYCIVRAGDFNEAEGGRRPLLFEQDRDLEDKQVRTVSRADVAEVCVRSLLDPRACNISFDAFEGNFAPTAATATQDLSLLFGRLRPNT 557
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A2V3J7E6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7E6_9FLOR) HSP 1 Score: 186 bits (473), Expect = 4.360e-52 Identity = 112/298 (37.58%), Postives = 162/298 (54.36%), Query Frame = 1
Query: 19 WQLSSPSYQRVTWLPNKFNHGTLGSIGVANFGYV--------GVESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPA-----DGGGFILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
W+ PS P + N G VA G+V + + P +NL FSGFV+R +GDGK + +++RT G+++ A +++ N+W + R+ S F+P+ + LDR +I+Q+ + Y R+P D G F L +DY+KVYRTQ +P+F+ VS AS+ E + D E LR SGLTY IVR + + PGG +AI L+QD G ISRAD+AEI V SLLDPRACN+ F A + +AP+A+ P D+S++ R+RPNT
Sbjct: 183 WKRVVPSEGFDGARPPRVNFQMTGPSRVAFMGHVYSTYSGQAEIRTVPARVNLRGFSGFVLRCIGDGKNFFLVLRTSESVKNGVEYVAELKSHMNKWESVRIALSSFKPFDMKDGTKRRDAPQLDRGDIRQIAIQY-RKPVVLPEKDDGRFYLGVDYLKVYRTQEQPDFVLVSCASVTARDFSELDEGGLRMAAKDDVTAWKYLAENRLRNSGLTYCIVRPGSFTDQPGGNKAIMLEQDGDVSGAISRADVAEICVKSLLDPRACNVTFDAFESMYAPSAMLPREDVSSMLGRLRPNT 479
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A1X6PIK3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIK3_PORUM) HSP 1 Score: 187 bits (475), Expect = 1.740e-51 Identity = 120/309 (38.83%), Postives = 161/309 (52.10%), Query Frame = 1
Query: 46 RVTWLPNKFNHGT-LGSIGVANFGYVGVESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGEL-------VSGES-------TAALDRRNIQQLGVAYYRRPA----DGGGFILSLDYIKVYRTQLEPEFIYVSS---ASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLG-----------LISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
RV+W + LG + G + P NL FSG V+R +G+GK Y++++RT A G+Q+ A T N+W T RLPFS+F PY G +GE LDRR++ Q+ V Y + D G F L++D+IK YRTQ EP+F+ +SS +S AP T A E + AR E LR SGLTYTIVR + PGG +A+ + QD D ISRAD+AE+ V +LLDPRACNL F A + +APTA P+ D+S + R+RPNT
Sbjct: 284 RVSWTMTGASRAAFLGQVFEVYEGVAEAKCAPRRYNLLGFSGLVLRVIGNGKRYRLVLRTRGAAVVGLQYVATFATVKNKWTTVRLPFSEFTPYAAGTASPWQLPRTTGEDDEDQAADVPELDRRDVVQMAVQYAKPEVAPEKDDGQFYLAIDHIKAYRTQEEPDFVLLSSVDVSSRAAVAPVITDVAQEVTPEDADRTAWKARAEDALRLSGLTYTIVRAGAFTEQPGGQKALSVSQDAGDTSGGGGSSSAPSRKISRADVAEVCVKALLDPRACNLTFDAFESMYAPTAQTPSEDISVLLGRLRPNT 592
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: R7Q993_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q993_CHOCR) HSP 1 Score: 179 bits (454), Expect = 9.790e-50 Identity = 103/259 (39.77%), Postives = 148/259 (57.14%), Query Frame = 1
Query: 112 GYVGVESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPA-----DGGGFILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
G V + P LNL FSG ++R +GDGK Y +++RT G+++ A I++ N+W + R+P S F+ Y + LDR +++Q+ + + R+P D G F L +DY+K YRTQ +P+F+ +S AS+ E D A E LR SGLTY IVR + + PGG +AI L+QD G ISRAD+AEI V SLLDPRACN+ F A + +AP+A P+ D+S++ R+RPNT
Sbjct: 174 GMAEVRTIPSRLNLRGFSGLLLRCIGDGKNYFIVLRTGAGVREGVEYCAQIKSYKNKWGSLRIPISSFKAYDIKDHSRRRDAPELDRGDVRQMAIQF-RKPVVSPEKDDGRFYLGVDYLKAYRTQEQPDFVLLSCASVTARDFSELDEKGLRAVAKDDVAAWKYMAENRLRLSGLTYCIVRPGSFTDQPGGNKAIMLEQDGDVSGAISRADVAEICVKSLLDPRACNVTFDAFESMYAPSARLPSEDVSSMLGRLRPNT 431
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A7S1XIJ7_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XIJ7_9RHOD) HSP 1 Score: 177 bits (450), Expect = 3.410e-48 Identity = 117/308 (37.99%), Postives = 164/308 (53.25%), Query Frame = 1
Query: 46 RVTWLPNKFNHGTLGSIGVANFGYVGVES---QPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDF-----EPYKDGELVS--GESTAALDRRNIQQLGVAYYR---RPADGGG-FILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGL------------------ISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
RV++ N H L +G Y GV +P NL FSG ++R LG+GK Y ++RT + I + A+ T+ +RW T RLPFS F E + G +VS G TA LDR I QLG+ +++ RP D G F L++DYIK YRTQ EP+F+ +SSA + A + + + + E+ +R SGLTY I+R N GG + + L+QD I+RAD+AE+ V SLLDPRACNL F A +G FAPT+++P D+S +F R++PNT
Sbjct: 250 RVSFFLNDKKHAVL--VGKIFDRYNGVAEAFVRPDRCNLRGFSGLILRVLGNGKRYSFVIRTKDSEQSNICYTASFSTEQSRWTTVRLPFSSFKEAPTEGPRRGIVVSRSGARTAQLDRSAITQLGLLFHKPLLRPEDDDGDFYLAVDYIKAYRTQTEPDFVLLSSAEV----------ASKNSESLAERVLAKRKAEEAVRNSGLTYCIIRAGDLTNEEGGKRPLVLEQDSLSTSSRVPVVQPSSSGTSTSTQRITRADVAELCVRSLLDPRACNLVFTAYEGNFAPTSMSPTLDVSMLFERLKPNT 545
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A7S0XIT6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XIT6_9RHOD) HSP 1 Score: 169 bits (429), Expect = 5.280e-45 Identity = 116/330 (35.15%), Postives = 165/330 (50.00%), Query Frame = 1
Query: 46 RVTWLPNKFNHGTLGSIGVANFGYVGVES---QPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFE------PYKDGELVS-GESTAALDRRNIQQLGVAYYR---RPA-DGGGFILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDK----------------------------------------QDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
RV++ N+ H L +G Y G+ +P NL FSG ++R LG+GK Y ++T + + A+ T+ +RW T RLPFS FE P + L + GE +A LDR I QLG+ +++ RP D G F L++DYIK YRTQ EPEF+ +SSA + PG + PE + + E +R SGLTY I+R N GG + + L+Q+ + I+RAD+AE+ V SLLDPRACNL F A +G FAPT++ PN ++S +F R++PNT
Sbjct: 249 RVSFFLNERKHAVL--VGKIFDRYNGIAEAFVRPDRCNLRGFSGIILRVLGNGKNYHFAIQTAASEDKSLCYVASFATEKSRWTTVRLPFSSFELAPEKGPRRGFALPNRGERSAQLDRSAITQLGILFHKPIDRPEEDDGEFYLAVDYIKAYRTQTEPEFVLLSSADVAPGV--SAPEEASQAQF----VLAKRKAEDAVRNSGLTYCIIRAGALTNEEGGKRPLVLEQESARVDSSQVTAPVGVANKLAVAGANAAAESAPAVVTSSSSLSNTRTITRADVAELCVLSLLDPRACNLVFTAYEGNFAPTSMTPNSNVSMLFERLKPNT 570
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A7S3EC31_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EC31_9RHOD) HSP 1 Score: 152 bits (383), Expect = 1.290e-38 Identity = 94/254 (37.01%), Postives = 147/254 (57.87%), Query Frame = 1
Query: 145 LNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAA----LDRRNIQQLGVAYYRRPA-----DGGGFILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLG--LISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
LN+ FSG V+R LGDGK Y+++ RT G+ +EA T +W T RLP F+P +SG S LDR +++Q+ + Y R+P D G F L+LDY+K YRTQ E +F+ VS + + E + Y+ GE+ LR SG++Y IVR + + GG +A+ L+Q+ + LG IS++DLAE+ V++L DPRA N+ F A + ++APTA++P++D+ ++ ++PN+
Sbjct: 297 LNMRGFSGLVVRCLGDGKQYRMVFRTGPGDKNGVIYEAEFATVSGKWSTIRLPLVSFKPRS----LSGSSVPRELEELDRSDVRQIKIEY-RKPLSNPERDPGFFSLTLDYMKAYRTQNEADFVLVSCSKVTEAVNHRKQGREEDIGEDTAMKYM---GEESLRNSGISYCIVRSGQFTDQTGGRKALVLEQNTE-LGDKHISKSDLAEVCVSALQDPRARNVTFDAYEAQYAPTALSPSKDIGSMLEGLKPNS 541
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A7S3AV07_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AV07_9EUKA) HSP 1 Score: 149 bits (375), Expect = 4.680e-38 Identity = 101/297 (34.01%), Postives = 151/297 (50.84%), Query Frame = 1
Query: 127 ESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPADG----GGFILSLDYIKVYRTQLEPEFIYVSSAS-------------MPPGAPGATPE----------------------------AIEPLRTSDPKA---YVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGL-ISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPN 870
+ P L+LG +SG +++A+GDGKVY V+VRT+ + + GI++ A+ Q N + T RLPFS F Y+DG + + L+R I L +A+Y D G F LS+ +IK YR + EPE +YVS A+ + P A E A + + SD KA V +GE +LR SGLTY +VR + PGG + + Q D L ++R D+AE++V+SLLDPRACN+A + ++ T + +D+S + M+PN
Sbjct: 154 DDSPAPLDLGEYSGLIVKAIGDGKVYTVVVRTESFETDGIEYHADFAAQANTFSTARLPFSSFSAYRDGRRIPPANAPELNRGAIVGLALAFYPIRNDPSKTTGEFYLSVAHIKAYRKRDEPELVYVSDAAVGAHWRNQMTQSVLEPSTAAAAQETNPTEAGIASASMGGDESKGEGAEEEAGAAQDVGISDQKARRVQVKLQGEDLLRRSGLTYFMVRPGTLLDGPGGGR-LSFSQSVVDSTLPVTRTDVAEVIVSSLLDPRACNVACSVTASEY--TQMAAEQDISKLLEVMQPN 447 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8297.1.1 >prot_P-wetherbeei_contig8297.1.1 ID=prot_P-wetherbeei_contig8297.1.1|Name=mRNA_P-wetherbeei_contig8297.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=292bp QVDRELWQLSSPSYQRVTWLPNKFNHGTLGSIGVANFGYVGVESQPLGLNback to top mRNA from alignment at P-wetherbeei_contig8297:346..2716+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8297.1.1 ID=mRNA_P-wetherbeei_contig8297.1.1|Name=mRNA_P-wetherbeei_contig8297.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2371bp|location=Sequence derived from alignment at P-wetherbeei_contig8297:346..2716+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8297:346..2716+ >mRNA_P-wetherbeei_contig8297.1.1 ID=mRNA_P-wetherbeei_contig8297.1.1|Name=mRNA_P-wetherbeei_contig8297.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig8297:346..2716+ (Phaeothamnion wetherbeei SAG_119_79)back to top |