mRNA_P-wetherbeei_contig8297.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8297.1.1
Unique NamemRNA_P-wetherbeei_contig8297.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A835ZGW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW1_9STRA)

HSP 1 Score: 340 bits (871), Expect = 6.970e-107
Identity = 176/312 (56.41%), Postives = 218/312 (69.87%), Query Frame = 1
Query:    4 VDRELWQLSSPSYQRVTWLPNKFNHGTLGSIGVANFGYVGVESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPADGGGFILSLDYIKVYRTQLEPEFIYVSSASMPP----GAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNN------------------APGGIQAIRLQQDKQDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
            +DRELW L   +  R+ W PNKF+HGTLG +GV   G + VES  L LN+G FSG V+R LGDGK Y++I+RT LY   G+QFE+ +QT+PN+W THRLPFS FE +  G  + G     LDRR+++Q+ VAY R P+D G FI+SLD+IKVYRTQLEPEFIYVSSA++PP    G        +  L+  D KAY SA GE  LR+S LTYTIVR+ G+NN                  APGGIQAI++QQD+  +GLISRAD AEI V+ LLDPRACNLAFYASQ K+APTAI+P++D+S   ARMRPNT
Sbjct:  596 MDRELWSLGKEA-ARLKWAPNKFDHGTLGGVGVQELGDLSVESPKLDLNMGAFSGLVVRLLGDGKQYRIILRTKLYEMNGVQFESVVQTKPNKWQTHRLPFSTFEAHVGGTNIEGAQQVRLDRRDVKQIAVAYRRAPSDDGTFIVSLDFIKVYRTQLEPEFIYVSSAAVPPFEGRGVHEYDDTVLAQLQARDKKAYWSAMGENALRKS-LTYTIVRVAGFNNXXXXXXXXXXXXXXXXXXAPGGIQAIKMQQDQDGVGLISRADAAEICVSCLLDPRACNLAFYASQSKYAPTAISPDKDMSAELARMRPNT 905          
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: D7G0B1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B1_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 6.130e-102
Identity = 151/291 (51.89%), Postives = 199/291 (68.38%), Query Frame = 1
Query:    1 QVDRELWQLSSPSYQRVTWLPNKFNHGTLGSIGVANFGYVGVESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPADGGGFILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
            + DRELW +   S Q   W  NKF +GT GS  +   GY  VESQ + LNL  FSG  +R  GDGK Y+ I+R   Y   GIQFE  IQT+PN+W THRLPFS F+ Y  G++V  E+   +DR ++QQL + Y R P D   FILSL ++KVYRTQ+EPEFIYVSSA +PP         ++ L+   PK Y +ARGE++LR+SGLTYTI+R++G+NN PGGIQAI ++QD +++  +SRAD AEI V  LLDPRACNLA Y +  + AP+A NP++ ++T  +R+RPNT
Sbjct:  200 EADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEENGIQFETVIQTKPNKWQTHRLPFSAFDAYLYGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILSLHFVKVYRTQIEPEFIYVSSAGVPPMTDSNYDRILDTLKHESPKCYYNARGEELLRKSGLTYTIIRVEGFNNLPGGIQAIEIKQDPENVSKVSRADAAEITVQCLLDPRACNLALYTTTARQAPSAANPDQKMTTQLSRLRPNT 490          
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A5J4Z1C0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1C0_PORPP)

HSP 1 Score: 188 bits (478), Expect = 3.570e-52
Identity = 113/293 (38.57%), Postives = 163/293 (55.63%), Query Frame = 1
Query:   46 RVTWLPNKFNHGTLGSIGVANFGYVGVESQPLGL---NLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGEL-VSGESTAALDRRNIQQLGVAYYRRP----ADGGGFILSLDYIKVYRTQLEPEFIYVSSASMPP-----GAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDK----QDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
            RV+   N   +G L  +G     Y GV    L L   NL  FSG ++R +GDG  Y++ ++     SAG+ + A+ +T+ ++W T RLPFS F    D ++ +       LDR NIQ + + Y +       + G F L++DYIK YRTQ EP+F+ +S+A +        A   +  A+      DP      R E+ LR SGLTY IVR   +N A GG + +  +QD+    + +  +SRAD+AE+ V SLLDPRACN++F A +G FAPTA    +DLS +F R+RPNT
Sbjct:  267 RVSLFMNDKGNGVL--VGKVFEKYNGVAQAVLKLDQPNLKGFSGVILRVIGDGNTYRIALQCGSTQSAGVSYVASFKTEKSKWATIRLPFSSFIAMSDKQMNLRVRDAEELDRTNIQSIALQYTKSQDNPEKESGDFYLAVDYIKAYRTQEEPDFVLLSTAQLTEKGFTHNAGDLSVPAMADGEQPDPALLAKWRAEEALRNSGLTYCIVRAGDFNEAEGGRRPLLFEQDRDLEDKQVRTVSRADVAEVCVRSLLDPRACNISFDAFEGNFAPTAATATQDLSLLFGRLRPNT 557          
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A2V3J7E6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7E6_9FLOR)

HSP 1 Score: 186 bits (473), Expect = 4.360e-52
Identity = 112/298 (37.58%), Postives = 162/298 (54.36%), Query Frame = 1
Query:   19 WQLSSPSYQRVTWLPNKFNHGTLGSIGVANFGYV--------GVESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPA-----DGGGFILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
            W+   PS       P + N    G   VA  G+V         + + P  +NL  FSGFV+R +GDGK + +++RT      G+++ A +++  N+W + R+  S F+P+   +         LDR +I+Q+ + Y R+P      D G F L +DY+KVYRTQ +P+F+ VS AS+         E    +   D         E  LR SGLTY IVR   + + PGG +AI L+QD    G ISRAD+AEI V SLLDPRACN+ F A +  +AP+A+ P  D+S++  R+RPNT
Sbjct:  183 WKRVVPSEGFDGARPPRVNFQMTGPSRVAFMGHVYSTYSGQAEIRTVPARVNLRGFSGFVLRCIGDGKNFFLVLRTSESVKNGVEYVAELKSHMNKWESVRIALSSFKPFDMKDGTKRRDAPQLDRGDIRQIAIQY-RKPVVLPEKDDGRFYLGVDYLKVYRTQEQPDFVLVSCASVTARDFSELDEGGLRMAAKDDVTAWKYLAENRLRNSGLTYCIVRPGSFTDQPGGNKAIMLEQDGDVSGAISRADVAEICVKSLLDPRACNVTFDAFESMYAPSAMLPREDVSSMLGRLRPNT 479          
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A1X6PIK3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIK3_PORUM)

HSP 1 Score: 187 bits (475), Expect = 1.740e-51
Identity = 120/309 (38.83%), Postives = 161/309 (52.10%), Query Frame = 1
Query:   46 RVTWLPNKFNHGT-LGSIGVANFGYVGVESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGEL-------VSGES-------TAALDRRNIQQLGVAYYRRPA----DGGGFILSLDYIKVYRTQLEPEFIYVSS---ASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLG-----------LISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
            RV+W     +    LG +     G    +  P   NL  FSG V+R +G+GK Y++++RT   A  G+Q+ A   T  N+W T RLPFS+F PY  G          +GE           LDRR++ Q+ V Y +       D G F L++D+IK YRTQ EP+F+ +SS   +S    AP  T  A E       +    AR E  LR SGLTYTIVR   +   PGG +A+ + QD  D              ISRAD+AE+ V +LLDPRACNL F A +  +APTA  P+ D+S +  R+RPNT
Sbjct:  284 RVSWTMTGASRAAFLGQVFEVYEGVAEAKCAPRRYNLLGFSGLVLRVIGNGKRYRLVLRTRGAAVVGLQYVATFATVKNKWTTVRLPFSEFTPYAAGTASPWQLPRTTGEDDEDQAADVPELDRRDVVQMAVQYAKPEVAPEKDDGQFYLAIDHIKAYRTQEEPDFVLLSSVDVSSRAAVAPVITDVAQEVTPEDADRTAWKARAEDALRLSGLTYTIVRAGAFTEQPGGQKALSVSQDAGDTSGGGGSSSAPSRKISRADVAEVCVKALLDPRACNLTFDAFESMYAPTAQTPSEDISVLLGRLRPNT 592          
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: R7Q993_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q993_CHOCR)

HSP 1 Score: 179 bits (454), Expect = 9.790e-50
Identity = 103/259 (39.77%), Postives = 148/259 (57.14%), Query Frame = 1
Query:  112 GYVGVESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPA-----DGGGFILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
            G   V + P  LNL  FSG ++R +GDGK Y +++RT      G+++ A I++  N+W + R+P S F+ Y   +         LDR +++Q+ + + R+P      D G F L +DY+K YRTQ +P+F+ +S AS+         E        D  A      E  LR SGLTY IVR   + + PGG +AI L+QD    G ISRAD+AEI V SLLDPRACN+ F A +  +AP+A  P+ D+S++  R+RPNT
Sbjct:  174 GMAEVRTIPSRLNLRGFSGLLLRCIGDGKNYFIVLRTGAGVREGVEYCAQIKSYKNKWGSLRIPISSFKAYDIKDHSRRRDAPELDRGDVRQMAIQF-RKPVVSPEKDDGRFYLGVDYLKAYRTQEQPDFVLLSCASVTARDFSELDEKGLRAVAKDDVAAWKYMAENRLRLSGLTYCIVRPGSFTDQPGGNKAIMLEQDGDVSGAISRADVAEICVKSLLDPRACNVTFDAFESMYAPSARLPSEDVSSMLGRLRPNT 431          
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A7S1XIJ7_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XIJ7_9RHOD)

HSP 1 Score: 177 bits (450), Expect = 3.410e-48
Identity = 117/308 (37.99%), Postives = 164/308 (53.25%), Query Frame = 1
Query:   46 RVTWLPNKFNHGTLGSIGVANFGYVGVES---QPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDF-----EPYKDGELVS--GESTAALDRRNIQQLGVAYYR---RPADGGG-FILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGL------------------ISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
            RV++  N   H  L  +G     Y GV     +P   NL  FSG ++R LG+GK Y  ++RT     + I + A+  T+ +RW T RLPFS F     E  + G +VS  G  TA LDR  I QLG+ +++   RP D  G F L++DYIK YRTQ EP+F+ +SSA +          A +   +   +     + E+ +R SGLTY I+R     N  GG + + L+QD                        I+RAD+AE+ V SLLDPRACNL F A +G FAPT+++P  D+S +F R++PNT
Sbjct:  250 RVSFFLNDKKHAVL--VGKIFDRYNGVAEAFVRPDRCNLRGFSGLILRVLGNGKRYSFVIRTKDSEQSNICYTASFSTEQSRWTTVRLPFSSFKEAPTEGPRRGIVVSRSGARTAQLDRSAITQLGLLFHKPLLRPEDDDGDFYLAVDYIKAYRTQTEPDFVLLSSAEV----------ASKNSESLAERVLAKRKAEEAVRNSGLTYCIIRAGDLTNEEGGKRPLVLEQDSLSTSSRVPVVQPSSSGTSTSTQRITRADVAELCVRSLLDPRACNLVFTAYEGNFAPTSMSPTLDVSMLFERLKPNT 545          
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A7S0XIT6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XIT6_9RHOD)

HSP 1 Score: 169 bits (429), Expect = 5.280e-45
Identity = 116/330 (35.15%), Postives = 165/330 (50.00%), Query Frame = 1
Query:   46 RVTWLPNKFNHGTLGSIGVANFGYVGVES---QPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFE------PYKDGELVS-GESTAALDRRNIQQLGVAYYR---RPA-DGGGFILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDK----------------------------------------QDLGLISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
            RV++  N+  H  L  +G     Y G+     +P   NL  FSG ++R LG+GK Y   ++T       + + A+  T+ +RW T RLPFS FE      P +   L + GE +A LDR  I QLG+ +++   RP  D G F L++DYIK YRTQ EPEF+ +SSA + PG   + PE     +          + E  +R SGLTY I+R     N  GG + + L+Q+                                          +   I+RAD+AE+ V SLLDPRACNL F A +G FAPT++ PN ++S +F R++PNT
Sbjct:  249 RVSFFLNERKHAVL--VGKIFDRYNGIAEAFVRPDRCNLRGFSGIILRVLGNGKNYHFAIQTAASEDKSLCYVASFATEKSRWTTVRLPFSSFELAPEKGPRRGFALPNRGERSAQLDRSAITQLGILFHKPIDRPEEDDGEFYLAVDYIKAYRTQTEPEFVLLSSADVAPGV--SAPEEASQAQF----VLAKRKAEDAVRNSGLTYCIIRAGALTNEEGGKRPLVLEQESARVDSSQVTAPVGVANKLAVAGANAAAESAPAVVTSSSSLSNTRTITRADVAELCVLSLLDPRACNLVFTAYEGNFAPTSMTPNSNVSMLFERLKPNT 570          
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A7S3EC31_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EC31_9RHOD)

HSP 1 Score: 152 bits (383), Expect = 1.290e-38
Identity = 94/254 (37.01%), Postives = 147/254 (57.87%), Query Frame = 1
Query:  145 LNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAA----LDRRNIQQLGVAYYRRPA-----DGGGFILSLDYIKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLG--LISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT 873
            LN+  FSG V+R LGDGK Y+++ RT      G+ +EA   T   +W T RLP   F+P      +SG S       LDR +++Q+ + Y R+P      D G F L+LDY+K YRTQ E +F+ VS + +            E +       Y+   GE+ LR SG++Y IVR   + +  GG +A+ L+Q+ + LG   IS++DLAE+ V++L DPRA N+ F A + ++APTA++P++D+ ++   ++PN+
Sbjct:  297 LNMRGFSGLVVRCLGDGKQYRMVFRTGPGDKNGVIYEAEFATVSGKWSTIRLPLVSFKPRS----LSGSSVPRELEELDRSDVRQIKIEY-RKPLSNPERDPGFFSLTLDYMKAYRTQNEADFVLVSCSKVTEAVNHRKQGREEDIGEDTAMKYM---GEESLRNSGISYCIVRSGQFTDQTGGRKALVLEQNTE-LGDKHISKSDLAEVCVSALQDPRARNVTFDAYEAQYAPTALSPSKDIGSMLEGLKPNS 541          
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Match: A0A7S3AV07_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AV07_9EUKA)

HSP 1 Score: 149 bits (375), Expect = 4.680e-38
Identity = 101/297 (34.01%), Postives = 151/297 (50.84%), Query Frame = 1
Query:  127 ESQPLGLNLGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRLPFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPADG----GGFILSLDYIKVYRTQLEPEFIYVSSAS-------------MPPGAPGATPE----------------------------AIEPLRTSDPKA---YVSARGEKVLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGL-ISRADLAEILVNSLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPN 870
            +  P  L+LG +SG +++A+GDGKVY V+VRT+ + + GI++ A+   Q N + T RLPFS F  Y+DG  +   +   L+R  I  L +A+Y    D     G F LS+ +IK YR + EPE +YVS A+             + P    A  E                            A + +  SD KA    V  +GE +LR SGLTY +VR     + PGG + +   Q   D  L ++R D+AE++V+SLLDPRACN+A   +  ++  T +   +D+S +   M+PN
Sbjct:  154 DDSPAPLDLGEYSGLIVKAIGDGKVYTVVVRTESFETDGIEYHADFAAQANTFSTARLPFSSFSAYRDGRRIPPANAPELNRGAIVGLALAFYPIRNDPSKTTGEFYLSVAHIKAYRKRDEPELVYVSDAAVGAHWRNQMTQSVLEPSTAAAAQETNPTEAGIASASMGGDESKGEGAEEEAGAAQDVGISDQKARRVQVKLQGEDLLRRSGLTYFMVRPGTLLDGPGGGR-LSFSQSVVDSTLPVTRTDVAEVIVSSLLDPRACNVACSVTASEY--TQMAAEQDISKLLEVMQPN 447          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8297.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZGW1_9STRA6.970e-10756.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G0B1_ECTSI6.130e-10251.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5J4Z1C0_PORPP3.570e-5238.57Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A2V3J7E6_9FLOR4.360e-5237.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PIK3_PORUM1.740e-5138.83Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7Q993_CHOCR9.790e-5039.77Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1XIJ7_9RHOD3.410e-4837.99Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0XIT6_9RHOD5.280e-4535.15Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S3EC31_9RHOD1.290e-3837.01Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3AV07_9EUKA4.680e-3834.01Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8297contigP-wetherbeei_contig8297:346..2716 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G0B1
PFAMsCIA30,NAD_binding_10
Model size876
Max annot lvl2759|Eukaryota
KEGG koko:K04498
KEGG Pathwayko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.01e-102
EggNOG OGsCOG0702@1|root,KOG1203@2759|Eukaryota
Ec32 ortholog descriptionGalactose-binding domain-like
Ec32 orthologEc-02_001140.1
EC2.3.1.48
Descriptiondivinyl chlorophyllide a 8-vinyl-reductase activity
Cds size876
COG categoryGM
BRITEko00000,ko00001,ko01000,ko03000,ko03029,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8297.1.1prot_P-wetherbeei_contig8297.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8297 346..2716 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187031.7894506-CDS-P-wetherbeei_contig8297:345..5121683187031.7894506-CDS-P-wetherbeei_contig8297:345..512Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8297 346..512 +
1683187031.8032978-CDS-P-wetherbeei_contig8297:819..9841683187031.8032978-CDS-P-wetherbeei_contig8297:819..984Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8297 820..984 +
1683187031.8127954-CDS-P-wetherbeei_contig8297:1260..13151683187031.8127954-CDS-P-wetherbeei_contig8297:1260..1315Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8297 1261..1315 +
1683187031.8234875-CDS-P-wetherbeei_contig8297:1581..17431683187031.8234875-CDS-P-wetherbeei_contig8297:1581..1743Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8297 1582..1743 +
1683187031.834515-CDS-P-wetherbeei_contig8297:2083..22561683187031.834515-CDS-P-wetherbeei_contig8297:2083..2256Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8297 2084..2256 +
1683187031.844945-CDS-P-wetherbeei_contig8297:2562..27161683187031.844945-CDS-P-wetherbeei_contig8297:2562..2716Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8297 2563..2716 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8297.1.1

>prot_P-wetherbeei_contig8297.1.1 ID=prot_P-wetherbeei_contig8297.1.1|Name=mRNA_P-wetherbeei_contig8297.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=292bp
QVDRELWQLSSPSYQRVTWLPNKFNHGTLGSIGVANFGYVGVESQPLGLN
LGPFSGFVIRALGDGKVYKVIVRTDLYASAGIQFEANIQTQPNRWLTHRL
PFSDFEPYKDGELVSGESTAALDRRNIQQLGVAYYRRPADGGGFILSLDY
IKVYRTQLEPEFIYVSSASMPPGAPGATPEAIEPLRTSDPKAYVSARGEK
VLRESGLTYTIVRIKGYNNAPGGIQAIRLQQDKQDLGLISRADLAEILVN
SLLDPRACNLAFYASQGKFAPTAINPNRDLSTVFARMRPNT*
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mRNA from alignment at P-wetherbeei_contig8297:346..2716+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8297.1.1 ID=mRNA_P-wetherbeei_contig8297.1.1|Name=mRNA_P-wetherbeei_contig8297.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2371bp|location=Sequence derived from alignment at P-wetherbeei_contig8297:346..2716+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTTGACCGGGAACTGTGGCAGTTGTCGTCGCCGTCTTACCAGCGCGT GACGTGGTTGCCCAACAAGTTCAACCATGGGACCCTCGGAAGCATCGGCG TAGCCAACTTCGGATACGTCGGCGTCGAGTCCCAGCCGCTCGGGCTCAAC TTGGGTCCCTTCAGCGGGTGAGCTTTCTCGCCTCTTTTCTGATTTCTAGT TCTTGTTTCTATATCTGCTTTTTTGCTCGTCGGAGGGGCTGGTGGGTCTA CGCGGCTTTATTTCGCCTCGGAAGTACCACCGCAGATGAGAGGGCTCGAA GTGGTTGGAAAAGAAGAAAGTGTGAAAAATTGAGAAGGAAAAGATTTTGG GAAGACAGCGGGAGGTTCCCGACATGTGTTGCTTTCTTCCTCATTGTCCC TCTACCTTTTTCGCGCTCACCTTTTATTGCTTTCCTCGTCTTTGATTTCC TTAAACCTCATCCATGGGGTTTAGGTTTGTGATCCGCGCCCTGGGAGACG GCAAAGTGTACAAGGTGATCGTACGGACGGACCTGTATGCTTCTGCCGGT ATTCAGTTTGAGGCCAACATTCAGACGCAGCCCAACCGCTGGCTCACGCA CCGCCTCCCGTTCTCCGACTTCGAGCCTTACAAGGACGGGTGAGTTTAGC TTCTGTGTTTCTTTTCTCTCTTTGAGTTTTTATCTCTCCTTCTGTCTGCT CTGTCTTTCGTTCTTTTTTTGGCGTAAGCAGAAAACTTGATCAGCATCGA GTGGCTCTGGAGAACAATCTCCCTACCTTTTGGCATTCGTTGCTGATCGT TGATGGCGCACTTTATATAGCGCTCGGCGCTGCGGGATATTCATATGTTT TCTTCTTTTCTTGTTCCTGTCTTGCACGGCTGTCCCTCGTTGCCTGCCAT GCCTGCCTGCTGCAGGGAGCTGGTGTCGGGGGAGAGCACGGCGGCGCTCG ACCGGCGAAACATCCAGCAGGTACGCTCATTCTGAAGTGGCCCTCGGCAA GCAGAGAAATACTGATTTTACTTGTTGGCCCTCTAGTTTTGTTGGAAGTA CAACTGTTCTCCTGACCTCGGCGCGCCTGCCGGACGAAACGCAATTTACT CCCGCAAATGCCAAACGTTGAAGCGCTTCTCTATCCAAAGCGCTCCCCTT ATGAATGCGCTTCCCTGTTTCCTCTACCTTCTGGCTCTGTTGCTGCTGGA ATGTGCTCCATGCCGTTGCCGCGCTATGCCTTGCAGCTGGGGGTGGCGTA TTACCGGCGGCCGGCGGACGGCGGCGGGTTCATCCTCTCGCTGGACTACA TCAAGGTGTACCGTACGCAGCTCGAGCCCGAGTTCATTTACGTCTCCTCC GCCAGCATGCCGCCGGGGGCGCCGGGGGCCACGCCTGAGGCCATCGAGGT CGGCGAGGGGAGGATCTGTATCGCTCTGTGGTTGCGGGGTGGAGAGGGTT TTCCTTTTTTCACATGCTCCTGGCCCCCCTTGGAATCGGGGGTGGGACGT GCTGCGAGTAGTGGAAGCCCCCTTTCAGCCTGTTTTGTACAGGTCACCTG GGAGCAAGTCTTGCTTTCCATCACCAATCCCCAATTCTTCTTCTGTACCC TCACCGCTGCCGCAACCTAAACACCGTTGAGACGGTTCGGCCCGACGGCG CTCCGTGGTCGGATGCTCTCCTCTGGGAATATTTCTTCTTTGATTATGGT TATGGAAAAATACCGCAACGCGCTGCTCACTGTTTCAGCCGTTGCGGACT TCGGACCCGAAGGCGTACGTGTCGGCGCGCGGCGAGAAGGTGCTGCGGGA ATCGGGCTTGACTTATACCATCGTGCGAATCAAGGGCTATAACAACGCCC CCGGGGGCATACAAGCCATCCGCCTCCAGCAGGACAAGCAGGACCTCGGG CTCATCTCCCGGTGGGTCGGTGAACAGCAAAGTTAATAATAAAATTGAAA TTAATGAACGGCGGAGCAGGGGAGGGTGGACTGGAGATGGCGCGGGGAGG CGAGGGAGGGAAAGACGGGAGGGAGTCCGTTGTTTGAGGGGTAGAAGCAG TCGGTAGTTTGAGGGGTAGAAGGAGGAGCGCGCAGATAGCACGCTGAGCC ACCAGGTAGGCCCAAACAGACACCGCTCTAGCCGTTCTTCGCCGATGGCG TTTCCTTATTTCTCGCATTGTCGCTTCCTTTCCCGATGTTACTTTCCGTC CGCTTTTGGCGTCGCAGGGCGGATCTGGCGGAGATTCTCGTCAACAGCCT GCTGGACCCGCGGGCCTGCAACCTCGCCTTCTATGCCAGCCAGGGTAAGT TCGCGCCGACGGCCATCAACCCCAACCGTGATCTCTCGACCGTCTTCGCA CGGATGCGGCCCAACACATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8297:346..2716+

>mRNA_P-wetherbeei_contig8297.1.1 ID=mRNA_P-wetherbeei_contig8297.1.1|Name=mRNA_P-wetherbeei_contig8297.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig8297:346..2716+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTTGACCGGGAACTGTGGCAGTTGTCGTCGCCGTCTTACCAGCGCGT
GACGTGGTTGCCCAACAAGTTCAACCATGGGACCCTCGGAAGCATCGGCG
TAGCCAACTTCGGATACGTCGGCGTCGAGTCCCAGCCGCTCGGGCTCAAC
TTGGGTCCCTTCAGCGGGTTTGTGATCCGCGCCCTGGGAGACGGCAAAGT
GTACAAGGTGATCGTACGGACGGACCTGTATGCTTCTGCCGGTATTCAGT
TTGAGGCCAACATTCAGACGCAGCCCAACCGCTGGCTCACGCACCGCCTC
CCGTTCTCCGACTTCGAGCCTTACAAGGACGGGGAGCTGGTGTCGGGGGA
GAGCACGGCGGCGCTCGACCGGCGAAACATCCAGCAGCTGGGGGTGGCGT
ATTACCGGCGGCCGGCGGACGGCGGCGGGTTCATCCTCTCGCTGGACTAC
ATCAAGGTGTACCGTACGCAGCTCGAGCCCGAGTTCATTTACGTCTCCTC
CGCCAGCATGCCGCCGGGGGCGCCGGGGGCCACGCCTGAGGCCATCGAGC
CGTTGCGGACTTCGGACCCGAAGGCGTACGTGTCGGCGCGCGGCGAGAAG
GTGCTGCGGGAATCGGGCTTGACTTATACCATCGTGCGAATCAAGGGCTA
TAACAACGCCCCCGGGGGCATACAAGCCATCCGCCTCCAGCAGGACAAGC
AGGACCTCGGGCTCATCTCCCGGGCGGATCTGGCGGAGATTCTCGTCAAC
AGCCTGCTGGACCCGCGGGCCTGCAACCTCGCCTTCTATGCCAGCCAGGG
TAAGTTCGCGCCGACGGCCATCAACCCCAACCGTGATCTCTCGACCGTCT
TCGCACGGATGCGGCCCAACACATGA
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