mRNA_P-wetherbeei_contig8286.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8286.1.1 vs. uniprot
Match: A0A835YLB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB7_9STRA) HSP 1 Score: 390 bits (1003), Expect = 4.510e-128 Identity = 202/306 (66.01%), Postives = 244/306 (79.74%), Query Frame = 1
Query: 1 MTVRQLFNFSASEAVLGEYLGKYTYRDATLGK--IIKVSGSFFITTHYFAFAGRKVVDVDHMELNRTFKDLMRHDEVITVRFEGKKGLLFTDQRLDKKMFEVKNAPERDELHLAVMARWKSEDEVTSKEMRKLLRRKMTRLSLGYLTQAERLTQQTIGRLMADMTEKDKKQLFAGSVPIGLNRNQA-------------------------RHAQNSLDSGKAMDRVVFQEIHSGEIFGFDSFLTGAPAYSSIVVESEKAVVRSCTKDQIMARLREDRRLAATFYRIAAVSIASRLAEISPLDIYL 837
+ VR+LFN SA+E + E G YT+RD T K IIK G+F++TTH+ AFAG+K +D +HME+NR KD+MRHDEVI++RFEGKKG+LFTD +LD+KMFE K ER+ H VM++W+SE+EVTSKEMRKLLRRKMTRLSLGYL QAERLTQQ+I LMADM+E++KKQLFAGSVPIGLNRNQ HAQN+LDSG+AM+RVVFQEIHSG+IFGFDSFLTGAPAYSS+VV+SEK VVRSCTKDQIMARLREDR+L+A FY +AAVSIA+RL+E+SPLD++L
Sbjct: 464 LAVRRLFNLSAAEEIASEMKGSYTFRDVTDPKKRIIKAPGTFYVTTHFLAFAGKKFIDANHMEINRPVKDVMRHDEVISIRFEGKKGVLFTDIKLDRKMFEPKKPEERELFHRQVMSKWRSENEVTSKEMRKLLRRKMTRLSLGYLNQAERLTQQSIEGLMADMSEREKKQLFAGSVPIGLNRNQVVIGEHNFNDNLFLLCTGIVRVQRVQEHAQNALDSGRAMNRVVFQEIHSGQIFGFDSFLTGAPAYSSVVVDSEKCVVRSCTKDQIMARLREDRKLSAKFYSVAAVSIAARLSELSPLDLFL 769
BLAST of mRNA_P-wetherbeei_contig8286.1.1 vs. uniprot
Match: A0A6H5KEB5_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB5_9PHAE) HSP 1 Score: 356 bits (914), Expect = 8.740e-121 Identity = 193/303 (63.70%), Postives = 230/303 (75.91%), Query Frame = 1
Query: 16 LFNFSASEAVLGEYLG-KYTYRDATLGKIIKVSGSFFITTHYFAFAGRKVVDVDHMELNRTFKDLMRHDEVITVRFEGK--KGLLFTDQRLDKKMFEVKNAPERDELHLAVMARWKSEDEVTSKEMRKLLRRKMTRLSLGYLTQAERLTQQTIGRLMADMTEKDKKQLFAGSVPIGLNRNQA-------------------------RHAQNSLDSGKAMDRVVFQEIHSGEIFGFDSFLTGAPAYSSIVVESEKAVV-RSCTKDQIMARLREDRRLAATFYRIAAVSIASRLAEISPLDIYL 837
+F+FSA+E +LGE+ +YTY D K +++ G+F+IT HYFAF G+K VD+ H+E+NR F+D+MRHDEVIT++ K K L+FTD +KM E K ERD L+ ++RWKSEDEVTS+EMRK+LRRKMTRLSL +L QAE++TQ+ IG LM DM+E++KK LFAGSVPIGLNRNQ H N LDSGKAMDRVVFQEIHSGEIFGFDSFLTG+PAYSSIVV+SEKAVV RSCTKDQI+ARLREDR+LAA FYRIAAVSIASRLAEISPLDIYL
Sbjct: 1 MFSFSAAETILGEFTKTRYTYFDQEEKKEVRIQGTFYITDHYFAFVGKKTVDLSHLEINRQFRDVMRHDEVITIKRHTKSTKALVFTDIGQGRKMLEAKTEAERDNLYAQCISRWKSEDEVTSREMRKVLRRKMTRLSLDHLNQAEKMTQKGIGALMTDMSEREKKTLFAGSVPIGLNRNQVVIGELNFNDNLYLLCTGIVRVQRVKEHVSNVLDSGKAMDRVVFQEIHSGEIFGFDSFLTGSPAYSSIVVDSEKAVVVRSCTKDQIVARLREDRKLAAKFYRIAAVSIASRLAEISPLDIYL 303
BLAST of mRNA_P-wetherbeei_contig8286.1.1 vs. uniprot
Match: D8LM64_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM64_ECTSI) HSP 1 Score: 372 bits (956), Expect = 2.930e-118 Identity = 196/280 (70.00%), Postives = 230/280 (82.14%), Query Frame = 1
Query: 7 VRQLFNFSASEAVLGEYLG-KYTYRDATLGKIIKVSGSFFITTHYFAFAGRKVVDVDHMELNRTFKDLMRHDEVITVRFEGK--KGLLFTDQRLDKKMFEVKNAPERDELHLAVMARWKSEDEVTSKEMRKLLRRKMTRLSLGYLTQAERLTQQTIGRLMADMTEKDKKQLFAGSVPIGLNRNQARHAQNSLDSGKAMDRVVFQEIHSGEIFGFDSFLTGAPAYSSIVVESEKAVVRSCTKDQIMARLREDRRLAATFYRIAAVSIASRLAEISPLDIYL 837
VR +F+FSASE +LGE+ +YTY D K +++ G+F+IT HYFAF G+K VD+ H+E+NR F+D+MRHDEVIT++ K K L+FTD +KM E K ERD L+ +RWKSEDEVTS+EMRK+LRRKMTRLSL +L QAE +TQ+ IG LM DM+E++KK LFAGSVPIGLNRNQ H N LDSGKAMDRVVFQEIHSGEIFGFDSFLTG+PAYSSIVV+SEKAVVRSCTKDQI+ARLREDR+LAA FYRIAAVSIASRLAEISPLDIYL
Sbjct: 783 VRNMFSFSASETILGEFAKTRYTYFDQEEKKEVRIQGTFYITDHYFAFVGKKTVDLSHLEINRQFRDVMRHDEVITIKRHTKSTKALVFTDIGQGRKMLEAKTEAERDNLYAQCNSRWKSEDEVTSREMRKVLRRKMTRLSLDHLNQAETMTQKGIGALMTDMSEREKKTLFAGSVPIGLNRNQ-EHVSNVLDSGKAMDRVVFQEIHSGEIFGFDSFLTGSPAYSSIVVDSEKAVVRSCTKDQIVARLREDRKLAAKFYRIAAVSIASRLAEISPLDIYL 1061
BLAST of mRNA_P-wetherbeei_contig8286.1.1 vs. uniprot
Match: A0A7S3UPK2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPK2_HETAK) HSP 1 Score: 197 bits (500), Expect = 7.490e-55 Identity = 112/304 (36.84%), Postives = 181/304 (59.54%), Query Frame = 1
Query: 1 MTVRQLFNFSASEAVLGEYLGKY-TYRDAT-LGKIIKVSGSFFITTHYFAFAGRKVVDVDHMELNRTFKDLMRHDEVITVRFEGKKGLLFTDQRLDKKMFEVKNAPERDELHLAVMARWKSEDEVTSKEMRKLLRRKMTRLSLGYLTQAERLTQQTIGRLMADMTEKDKKQLFAGSVPIGLNRNQA-------------------------RHAQNSLDSGKAMDRVVFQEIHSGEIFGFDSFLTGAPAYSSIVVESEKAVVRSCTKDQIMARLREDRRLAATFYRIAAVSIASRLAEISPLDI 831
+T++ +F FS +E + E+ ++ TY + +++ G+ ++T HY AF G + + K ++ +E++ ++ E ++ +L DQ L+KK+ +K + R+E+ +M +W+ ED T + R LLRR++T L+ L E + T ++++M+EKDK+ LF G++PI + RNQ H +G+A ++VVF EI++GE+FGFDSFLTG + SS +V+SEKA++R CTK QIM RL+ED+RLA+ FYR+AAVS+A RLAEISPLD+
Sbjct: 353 VTIQDIFGFSVTEELHKEFASEFFTYEKRNNIRTELRLKGTLYLTDHYVAFFGGPA----KLMSSTKHKVVIPFEEIVFLKNEKQRAILVCDQMLEKKLIVLKTSEAREEVMRFLMKKWRREDMETGAQARALLRRRITMLTNNQLEFVESSIKGTAHSVLSEMSEKDKRGLFMGTIPIAMQRNQVVIQEDMGNSTLYLLQAGVVRIQRLREHVGGETGTGRAAEKVVFHEINAGEMFGFDSFLTGESSSSSYLVDSEKAIIRCCTKQQIMERLKEDKRLASKFYRVAAVSLALRLAEISPLDV 652
BLAST of mRNA_P-wetherbeei_contig8286.1.1 vs. uniprot
Match: A0A7S2XW70_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW70_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.390e-13 Identity = 59/187 (31.55%), Postives = 99/187 (52.94%), Query Frame = 1
Query: 4 TVRQLFNFSASEAVLGEYLGKYTYRDATLGKIIKVSGSFFITTHYFAFAGRKV--VDVDHMELNRTFKDLMRHDEVIT-VRFEGKKGLLFTDQRLDKKMFEVKNAPERDELHLAVMARWK--SEDEVTSKEMRKLLRRKMTRLSLGYLTQAERLTQQTIGRLMADMTEKDKKQLFAGSVPIGLNRNQ 549
TV LFNF +E ++ E G++ V G+ ++T HY AF G + +D M+ F+ DE++ V+F+ K + + DQ +KK +++ +RD+L+ A++ RWK + + +R LRR++T L L + + + +MTE+DKK LFAG+VP+G+ RNQ
Sbjct: 543 TVHNLFNFDVTEGLIFESPNSKLSFLVDKGEVATVRGTVYLTDHYLAFYGHRHGRSGLDVMK-KFPFQIATALDEIVNMVKFKSK-VIKYVDQFFEKKEVVLRSEKDRDDLYAALVRRWKEGAARGNNAASLRAALRRRLTFLPDKALRYVDNEVKLLARNALGEMTERDKKLLFAGAVPVGMCRNQ 727 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8286.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8286.1.1 >prot_P-wetherbeei_contig8286.1.1 ID=prot_P-wetherbeei_contig8286.1.1|Name=mRNA_P-wetherbeei_contig8286.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=280bp MTVRQLFNFSASEAVLGEYLGKYTYRDATLGKIIKVSGSFFITTHYFAFAback to top mRNA from alignment at P-wetherbeei_contig8286:677..2465- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8286.1.1 ID=mRNA_P-wetherbeei_contig8286.1.1|Name=mRNA_P-wetherbeei_contig8286.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1789bp|location=Sequence derived from alignment at P-wetherbeei_contig8286:677..2465- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8286:677..2465- >mRNA_P-wetherbeei_contig8286.1.1 ID=mRNA_P-wetherbeei_contig8286.1.1|Name=mRNA_P-wetherbeei_contig8286.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=840bp|location=Sequence derived from alignment at P-wetherbeei_contig8286:677..2465- (Phaeothamnion wetherbeei SAG_119_79)back to top |