mRNA_P-wetherbeei_contig8056.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Match: A0A3G8GR03_9BURK (Uncharacterized protein n=1 Tax=Pigmentiphaga sp. H8 TaxID=2488560 RepID=A0A3G8GR03_9BURK) HSP 1 Score: 177 bits (448), Expect = 1.070e-53 Identity = 90/168 (53.57%), Postives = 116/168 (69.05%), Query Frame = 1
Query: 4 MRDPTPETSPLKRARLAPPASLDGKTVALFDIGKTRTKEFLDRVELRLREKNIATMRVGKPTNAKIATPEILQKVTDEADVVLIALSD*GSCTSCSLHDLMNLDSRGIPGVNIVTTGFTDAVAAHSTALGFEPAVVFVPHPIQNRTAEELDRLADVAVEEAIKKLTSA 507
+RDPTPE + L R R APPASL+GKTVAL DIGK R EF+DR+E +AT R KPTN + A ++Q + D+V+IALSD GSCTSCS HDL +LD RG+PGV+++TT F DA A A+GFE A ++VPHP+QNRT EL LA+ + E + LT++
Sbjct: 6 LRDPTPELASLLRPRKAPPASLEGKTVALMDIGKMRGDEFIDRLEQLFASVGVATHRYKKPTNTRTAPVPMIQDIAQNCDLVVIALSDCGSCTSCSTHDLNDLDQRGLPGVSVLTTEFRDAFAKQCAAIGFEGASLYVPHPMQNRTTAELHGLAEESFESILASLTAS 173
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Match: UPI00194E1B7E (hypothetical protein n=1 Tax=Elioraea rosea TaxID=2492390 RepID=UPI00194E1B7E) HSP 1 Score: 161 bits (407), Expect = 1.830e-47 Identity = 85/158 (53.80%), Postives = 105/158 (66.46%), Query Frame = 1
Query: 4 MRDPTPETSPLKRARLAPPASLDGKTVALFDIGKTRTKEFLDRVELRLREKNIATMRVGKPTNAKIATPEILQKVTDEADVVLIALSD*GSCTSCSLHDLMNLDSRGIPGVNIVTTGFTDAVAAHSTALGFEPAVVFVPHPIQNRTAEELDRLADVAV 477
+RDPT E S R R+ PP SL G TVAL DIGK R EF+DR+E L E+ IAT R KPTN + A E LQ++ +IALSD GSCTSCS HDL +LD RGIPGV+++T F + AA A+GF+ A V V HP+QNRT EL +A+VA+
Sbjct: 5 LRDPTAEISGALRRRVPPPTSLLGVTVALLDIGKMRGDEFIDRLEALLAERGIATRRFRKPTNTRTAPVETLQEIATTCGAAVIALSDCGSCTSCSTHDLNDLDRRGIPGVSVITETFVEPFAAQCRAIGFDGASVVVAHPVQNRTTAELHAMAEVAL 162
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Match: A0A1Y2JEI0_BRAJP (Uncharacterized protein n=4 Tax=Bradyrhizobium TaxID=374 RepID=A0A1Y2JEI0_BRAJP) HSP 1 Score: 159 bits (401), Expect = 1.950e-46 Identity = 77/164 (46.95%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 7 RDPTPETSPLKRARLAPPASLDGKTVALFDIGKTRTKEFLDRVELRLREKNIATMRVGKPTNAKIATPEILQKVTDEADVVLIALSD*GSCTSCSLHDLMNLDSRGIPGVNIVTTGFTDAVAAHSTALGFEPAVVFVPHPIQNRTAEELDRLADVAVEEAIKKL 498
RDPT E++ R R+AP ++ GKT+AL DIGK R EF+DR+E E+ I T+R KPTN ++A E+++ + ++ D V+IALSD GSCTSCS HDL +LD +G+ GV+++TT F A + ++G + A V+V HP+QNRT EL R A+ AV+E ++ +
Sbjct: 8 RDPTAESASALRDRVAPLETVRGKTIALMDIGKMRGDEFIDRLEQLCAERGIKTLRYKKPTNTRVAPREMIKDIAEDCDAVIIALSDCGSCTSCSTHDLNDLDKKGLAGVSVLTTEFRQAFESQKASIGLDGAAVYVAHPLQNRTTAELHRWAEAAVDEILQMI 171
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Match: A0A1H0B7V0_9BRAD (Uncharacterized protein n=1 Tax=Afipia sp. GAS231 TaxID=1882747 RepID=A0A1H0B7V0_9BRAD) HSP 1 Score: 155 bits (393), Expect = 3.690e-45 Identity = 76/165 (46.06%), Postives = 112/165 (67.88%), Query Frame = 1
Query: 7 RDPTPETSPLKRARLAPPASLDGKTVALFDIGKTRTKEFLDRVELRLREKNIATMRVGKPTNAKIATPEILQKVTDEADVVLIALSD*GSCTSCSLHDLMNLDSRGIPGVNIVTTGFTDAVAAHSTALGFEPAVVFVPHPIQNRTAEELDRLADVAVEEAIKKLT 501
RDPT ET+ R R+AP + GKT+AL DIGK R EF+DR+E E+ I T R KPTN ++A E+++ + + D V+IALSD GSCTSCS HDL +LD +G+ GV+++T+ F +A + ++G + A V+VPHP+QN+T EL + A+ A+ E ++ +T
Sbjct: 8 RDPTGETASTLRERVAPLDKISGKTIALMDIGKMRGDEFIDRLEQLCTERGIKTRRYKKPTNTRVAPREMIKDIAENCDAVIIALSDCGSCTSCSTHDLNDLDKKGLAGVSVLTSEFQEAFDSQKGSIGLDAAAVYVPHPLQNKTTAELYQWAEGAIVEILQAIT 172
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Match: F7QEP0_9BRAD (Selenoprotein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C TaxID=709797 RepID=F7QEP0_9BRAD) HSP 1 Score: 155 bits (391), Expect = 6.380e-45 Identity = 79/164 (48.17%), Postives = 108/164 (65.85%), Query Frame = 1
Query: 7 RDPTPETSPLKRARLAPPASLDGKTVALFDIGKTRTKEFLDRVELRLREKNIATMRVGKPTNAKIATPEILQKVTDEADVVLIALSD*GSCTSCSLHDLMNLDSRGIPGVNIVTTGFTDAVAAHSTALGFEPAVVFVPHPIQNRTAEELDRLADVAVEEAIKKL 498
RDPT ET+ R R A +L KT+AL DIGK R EF+DR+E E+ I T R KPTN ++A E+++ + D D V+IALSD GSCTSCS HDL +LD R + GV+++TT F A + ++G + A V+VPHP+QN+T EL + AD AVEE ++ +
Sbjct: 8 RDPTAETASALRERAALLDTLKDKTIALMDIGKMRGDEFIDRLEQLCAERGIKTRRYKKPTNTRVAPREMIKDIADNCDAVIIALSDCGSCTSCSTHDLNDLDKRELAGVSVLTTEFQQAFESQKGSIGLDAAAVYVPHPLQNKTTAELHQWADAAVEEILQAI 171
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Match: UPI001AEC73C0 (hypothetical protein n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=UPI001AEC73C0) HSP 1 Score: 154 bits (390), Expect = 9.040e-45 Identity = 75/168 (44.64%), Postives = 108/168 (64.29%), Query Frame = 1
Query: 4 MRDPTPETSPLKRARLAPPASLDGKTVALFDIGKTRTKEFLDRVELRLREKNIATMRVGKPTNAKIATPEILQKVTDEADVVLIALSD*GSCTSCSLHDLMNLDSRGIPGVNIVTTGFTDAVAAHSTALGFEPAVVFVPHPIQNRTAEELDRLADVAVEEAIKKLTSA 507
+RDPT E++ R R P A+LDG TVAL DIGK R EF+DR+E RE+ +AT R KPTN ++A +++ + V+IALSD GSCTSCS HDL + D RG+ GV+++T F A A+G + A ++VPHP+QN+T +EL A+ +++ + + SA
Sbjct: 7 LRDPTAESASALRPRTPPLATLDGATVALMDIGKMRGDEFIDRIEQLCRERGVATRRYKKPTNTRVAPRDMIADIASTCSAVVIALSDCGSCTSCSTHDLNDFDKRGLAGVSVLTEEFRHAFEQQKAAIGLDAAAIYVPHPMQNKTTDELHAFAEQSIDRILAAICSA 174
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Match: UPI001FBA50DB (hypothetical protein n=3 Tax=unclassified Methylobacterium TaxID=2615210 RepID=UPI001FBA50DB) HSP 1 Score: 154 bits (389), Expect = 1.280e-44 Identity = 78/167 (46.71%), Postives = 109/167 (65.27%), Query Frame = 1
Query: 4 MRDPTPETSPLKRARLAPPASLDGKTVALFDIGKTRTKEFLDRVELRLREKNIATMRVGKPTNAKIATPEILQKVTDEADVVLIALSD*GSCTSCSLHDLMNLDSRGIPGVNIVTTGFTDAVAAHSTALGFEPAVVFVPHPIQNRTAEELDRLADVAVEEAIKKLTS 504
+RDPT ET+ R R+ P +L G+TVAL DIGK R EF+DR+E+ RE+ I T R KPTN ++A E++ + V+IALSD GSCTSCS HDL +LD RG+ GV+++TT F A + + +G + A V+V HP+QN+T EL AD+A +K +T+
Sbjct: 7 LRDPTAETASALRPRVEPLDTLQGRTVALMDIGKMRGDEFIDRLEVLCRERGITTRRYKKPTNTRVAPREMILDIAAHCQAVIIALSDCGSCTSCSTHDLNDLDKRGLTGVSVLTTEFAQAFESQRSTIGLDAASVYVSHPMQNKTTAELHLSADLAFAAILKAITA 173
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Match: UPI0017C281C1 (Uncharacterized protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI0017C281C1) HSP 1 Score: 152 bits (385), Expect = 5.160e-44 Identity = 76/166 (45.78%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 10 DPTPETSPLKRARLAPPASLDGKTVALFDIGKTRTKEFLDRVELRLREKNIATMRVGKPTNAKIATPEILQKVTDEADVVLIALSD*GSCTSCSLHDLMNLDSRGIPGVNIVTTGFTDAVAAHSTALGFEPAVVFVPHPIQNRTAEELDRLADVAVEEAIKKLTSA 507
DPT ET+ R R AP +L G TVAL DIGK R EF+DR+E RE+ +AT R KPTN ++A E++ + V+IALSD GSCTSCS HDL +LD RG+ GV+++T F A A+GF+ A ++VPHP+QN+T EL A+ +++ + + +A
Sbjct: 9 DPTAETASALRPRTAPLTTLAGSTVALMDIGKMRGDEFIDRLEQLCRERGVATRRYKKPTNTRVAPREMIADIAASCQAVIIALSDCGSCTSCSTHDLNDLDKRGLAGVSVLTEEFRHAFDQQKAAIGFDAAAIYVPHPMQNKTTAELHAFAEESIDRILAAICAA 174
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Match: A0A661GMN2_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GMN2_9GAMM) HSP 1 Score: 142 bits (358), Expect = 4.800e-40 Identity = 77/167 (46.11%), Postives = 98/167 (58.68%), Query Frame = 1
Query: 4 MRDPTPETSPLKRARLAPPASLDGKTVALFDIGKTRTKEFLDRVELRLREKNIATMRVGKPTNAKIATPEILQKVTDEADVVLIALSD*GSCTSCSLHDLMNLDSRGIPGVNIVTTGFTDAVAAHSTALGFEPAVVFVPHPIQNRTAEELDRLADVAVEEAIKKLTS 504
+RDPT ET+ + R R PP SLD KTVAL DIGK R EF+DR+E + IAT R KPTN + A EI+Q + + D+V+IALSD GS GIPGVN++T F A + +GF A V+ PHP+QNRT E+L AD EE + +TS
Sbjct: 6 LRDPTAETAEVNRPRKPPPQSLDDKTVALLDIGKMRGDEFVDRMEQLFAARGIATKRYKKPTNTRTAPVEIIQDIVSDVDIVVIALSDCGSXXXXXXXXXXXXXQLGIPGVNVLTEEFRHAFEQQCSKIGFGGASVYTPHPMQNRTTEQLHEFADSVFEEIVAAITS 172
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Match: A0A7W6F861_9HYPH (Uncharacterized protein n=1 Tax=Methylobacterium brachythecii TaxID=1176177 RepID=A0A7W6F861_9HYPH) HSP 1 Score: 130 bits (327), Expect = 1.080e-35 Identity = 61/137 (44.53%), Postives = 92/137 (67.15%), Query Frame = 1
Query: 91 FDIGKTRTKEFLDRVELRLREKNIATMRVGKPTNAKIATPEILQKVTDEADVVLIALSD*GSCTSCSLHDLMNLDSRGIPGVNIVTTGFTDAVAAHSTALGFEPAVVFVPHPIQNRTAEELDRLADVAVEEAIKKLT 501
DIGK R EF+DR+E E+ I+T R KPTN ++A E++ + D V+IALSD GSCTSCS HDL +LD +G+ GV+++TT F A + +++G + A V+V HP+QN+T EEL R A+ A ++ ++ ++
Sbjct: 1 MDIGKMRGDEFIDRLEQLCSERGISTRRYKKPTNTRVAPREMINDIADNCQAVIIALSDCGSCTSCSTHDLNDLDKKGLAGVSVLTTEFEQAFESQKSSIGLDAASVYVEHPLQNKTTEELHRSAESAFDDILRAIS 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8056.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8056.1.1 >prot_P-wetherbeei_contig8056.1.1 ID=prot_P-wetherbeei_contig8056.1.1|Name=mRNA_P-wetherbeei_contig8056.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=89bp MRDPTPETSPLKRARLAPPASLDGKTVALFDIGKTRTKEFLDRVELRLREback to top mRNA from alignment at P-wetherbeei_contig8056:448..954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8056.1.1 ID=mRNA_P-wetherbeei_contig8056.1.1|Name=mRNA_P-wetherbeei_contig8056.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig8056:448..954+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8056:448..954+ >mRNA_P-wetherbeei_contig8056.1.1 ID=mRNA_P-wetherbeei_contig8056.1.1|Name=mRNA_P-wetherbeei_contig8056.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig8056:448..954+ (Phaeothamnion wetherbeei SAG_119_79)back to top |