mRNA_P-wetherbeei_contig798.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Match: D7G378_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G378_ECTSI) HSP 1 Score: 132 bits (333), Expect = 3.820e-34 Identity = 63/118 (53.39%), Postives = 93/118 (78.81%), Query Frame = 3
Query: 3 IVPAKAGKMAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRCVPSLWTSMPPDAQDEASVVLACLEQVPIFMRSFMRDVRDNIEDVLDITHLAVSLMVENK 356
IVPAKA KMA KSV ++T KL+N+K++F+RLDPD++ EALEPGLLA +++VV ++A + +P W +P ++D+ +VL LE VPIFMRSFM +V+ NI+DVLD+ H+ ++ +V+NK
Sbjct: 145 IVPAKAAKMAQKSVTLMTEKLINIKEVFSRLDPDEMCEALEPGLLAVVSRVVTEMAAKHMPGTWHFLPEASRDD--IVLKALEDVPIFMRSFMGEVKTNIDDVLDVHHMVITNLVKNK 260
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Match: A0A7S2SNZ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNZ7_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.260e-26 Identity = 52/119 (43.70%), Postives = 85/119 (71.43%), Query Frame = 3
Query: 3 IVPAKAGKMAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRCVP-SLWTSMPPDAQDEASVVLACLEQVPIFMRSFMRDVRDNIEDVLDITHLAVSLMVENK 356
I+PAKAGKMA KSVD++T KL++V+++F+RLDP + ++ +E G+L ++K+V ++A + +P +W P Q+E VL L++ P F+ +FM D++DNIE D+ H+ V+ MV+NK
Sbjct: 69 IIPAKAGKMAGKSVDLMTEKLIDVQEVFSRLDPLRFSKVMEAGMLDMMSKIVHEIAAKWLPPGVWARTPKSVQEET--VLKALDEAPRFLSTFMNDIKDNIETYFDLKHMVVTNMVKNK 185
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Match: A0A7S2S4J1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4J1_9STRA) HSP 1 Score: 103 bits (257), Expect = 5.850e-26 Identity = 51/118 (43.22%), Postives = 76/118 (64.41%), Query Frame = 3
Query: 3 IVPAKAGKMAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRCVPSLWTSMPPDAQDEASVVLACLEQVPIFMRSFMRDVRDNIEDVLDITHLAVSLMVENK 356
I+PAKA KMA M+TT+L+N K++F RLDP K E +E GLL + VV++VA P W+++P + +DE +V+ P F+ +FM DV+DN++D+LDI + V V+NK
Sbjct: 10 IIPAKAEKMAVICFKMMTTRLINTKELFMRLDPSKFAEIMEDGLLLVVDDVVNEVANEHFPKFWSTLPQEVKDE--IVVLTDSACPQFLTAFMLDVQDNVDDILDIKDMCVKACVKNK 125
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Match: A0A7S2EBD3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBD3_TRICV) HSP 1 Score: 107 bits (266), Expect = 6.390e-25 Identity = 54/118 (45.76%), Postives = 79/118 (66.95%), Query Frame = 3
Query: 3 IVPAKAGKMAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRCVPSLWTSMPPDAQDEASVVLACLEQVPIFMRSFMRDVRDNIEDVLDITHLAVSLMVENK 356
I+P KA KMA+ D++TTKLL+V++IF RLDP K E +E GLL + +VD+VA+ +P W +P D +DE +V+A F+ FM D+R++++DVLDI ++ VS VENK
Sbjct: 58 IIPTKAEKMASICFDLMTTKLLDVREIFHRLDPKKFGEVMEDGLLLLMDGIVDEVARTYMPKAWEKLPKDVKDE--IVIAMDRASGTFLEKFMYDMREHVDDVLDIKNMTVSACVENK 173
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Match: A0A7S2LBA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LBA4_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.900e-25 Identity = 49/118 (41.53%), Postives = 83/118 (70.34%), Query Frame = 3
Query: 3 IVPAKAGKMAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRCVPSLWTSMPPDAQDEASVVLACLEQVPIFMRSFMRDVRDNIEDVLDITHLAVSLMVENK 356
I+PAK KMA K+VD++ KLLNVK+IF+RLD ++ + ++ GL+ + +++ + A +P +W +P D +DE VV A +E F++ FM+D++++I+DVLDI H++V+ V+NK
Sbjct: 68 IIPAKTEKMARKAVDLMLEKLLNVKEIFSRLDAEEFSNVMDRGLILLIDRIISETAMEYMPRVWKGLPDDVKDEI-VVKASIESNQKFLKLFMQDMQEHIDDVLDIRHMSVTACVQNK 184
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Match: B8C8A7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8A7_THAPS) HSP 1 Score: 106 bits (264), Expect = 1.150e-24 Identity = 54/119 (45.38%), Postives = 80/119 (67.23%), Query Frame = 3
Query: 3 IVPAKAGKMAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRCVPSLWTSMPPDAQDEASVVLACLEQVPIFMRSFMRDVRDNIEDVLDITHLAVSLMVENKV 359
I+P KA KMA+ D++TTKLLN+K+IF RLDP K E +E LL L VV++VA +PS+W+S+P + +DE VV+ + F+ FM +++ +I+D+LDI + V+ VENKV
Sbjct: 62 IIPTKAEKMASVCFDLMTTKLLNLKEIFDRLDPKKFGEVMEDALLLMLDTVVNEVAMEYMPSMWSSLPKEVKDEVIVVMNIESET--FLVGFMEEIKAHIDDILDIKQMTVAACVENKV 178
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Match: A0A7S0FMZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMZ7_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 6.350e-23 Identity = 42/118 (35.59%), Postives = 80/118 (67.80%), Query Frame = 3
Query: 3 IVPAKAGKMAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRCVPSLWTSMPPDAQDEASVVLACLEQVPIFMRSFMRDVRDNIEDVLDITHLAVSLMVENK 356
I+P KA KMA+ +++TT+LLN+++IF RL+P+K +E +E G+L + +++D+V +P +W +P D +DE +V+ + F+ +FM D++ +++D+LD+ + V+ V+NK
Sbjct: 8 IIPTKAEKMASICFELMTTRLLNIREIFNRLEPEKFSEVMEDGVLLLMDEILDEVGMEYMPDVWKKLPQDVRDE--MVVVAHQASDEFLTAFMTDMQKHVDDILDMKQMTVNACVQNK 123
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Match: K0RT03_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RT03_THAOC) HSP 1 Score: 100 bits (250), Expect = 2.600e-22 Identity = 50/118 (42.37%), Postives = 77/118 (65.25%), Query Frame = 3
Query: 3 IVPAKAGKMAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRCVPSLWTSMPPDAQDEASVVLACLEQVPIFMRSFMRDVRDNIEDVLDITHLAVSLMVENK 356
I+P KA KMA+ D++TTKLLN+++IF RLDP + +E +E LL L +VD VA + +P +W +P D +DE VV+ + F+ SFM +V+++I+D+LDI + V+ V K
Sbjct: 367 IIPTKAEKMASVCFDLMTTKLLNLREIFDRLDPARFSEVMEDALLLMLDSIVDKVATKYMPRMWKELPQDVKDEVVVVMNI--ESDAFLVSFMEEVKEHIDDILDIKQMTVAACVREK 482
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Match: A0A5B8MRM7_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MRM7_9CHLO) HSP 1 Score: 99.0 bits (245), Expect = 4.210e-22 Identity = 47/118 (39.83%), Postives = 79/118 (66.95%), Query Frame = 3
Query: 3 IVPAKAGKMAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRCVPSLWTSMPPDAQDEASVVLACLEQVPIFMRSFMRDVRDNIEDVLDITHLAVSLMVENK 356
I+PAKAGKMA V+++TTKLL+V+++F+R+DP ++ L +L KVVD + + +P++W+ +P A DE V L+ E + ++ M ++++NIEDV+D+ HL VS+ + K
Sbjct: 29 IIPAKAGKMAEIMVELMTTKLLDVREVFSRMDPKRMARILSEDARGSLYKVVDGLGQEQLPNVWSLVPRSALDECVVFLS--EDIDRYVEGLMEELKENIEDVMDLKHLVVSIALNEK 144
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Match: A0A7S2LQF0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQF0_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.170e-21 Identity = 46/118 (38.98%), Postives = 79/118 (66.95%), Query Frame = 3
Query: 3 IVPAKAGKMAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRCVPSLWTSMPPDAQDEASVVLACLEQVPIFMRSFMRDVRDNIEDVLDITHLAVSLMVENK 356
I+P K+ KMA+ D++TTKLLN+K+IF RLDP + +E +E ++ L +V++VA + +P++W+ +P +DE VV+ + F+ +FM +V+++I+DVLDI + V+ V K
Sbjct: 29 IIPTKSEKMASICFDLMTTKLLNLKEIFDRLDPKRFSEVMEDAIMLMLDSIVEEVAMKYMPNVWSMLPKKVKDEIIVVMNIESET--FLTTFMEEVKEHIDDVLDIKQMTVAACVREK 144 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig798.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig798.1.1 >prot_P-wetherbeei_contig798.1.1 ID=prot_P-wetherbeei_contig798.1.1|Name=mRNA_P-wetherbeei_contig798.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp MAAKSVDMLTTKLLNVKQIFARLDPDKLTEALEPGLLATLAKVVDDVAKRback to top mRNA from alignment at P-wetherbeei_contig798:51..884- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig798.1.1 ID=mRNA_P-wetherbeei_contig798.1.1|Name=mRNA_P-wetherbeei_contig798.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig798:51..884- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig798:51..884- >mRNA_P-wetherbeei_contig798.1.1 ID=mRNA_P-wetherbeei_contig798.1.1|Name=mRNA_P-wetherbeei_contig798.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig798:51..884- (Phaeothamnion wetherbeei SAG_119_79)back to top |