mRNA_P-wetherbeei_contig7946.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: A0A6H5KNH6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH6_9PHAE) HSP 1 Score: 137 bits (344), Expect = 1.100e-29 Identity = 96/249 (38.55%), Postives = 123/249 (49.40%), Query Frame = 2
Query: 1166 AAHRDAAGYDMEQICNIDETGLLYKLLPRWTYSLQNEDRLTARGTKGMKAKDRPPLHLHVHRAQVAALWL*PVWPRARDASSASAYR*MKWPWVYFSQQKVGPTWSSSTT--RGTRSSCRTCTGGQASRPVVLITDNCSGDGKPADPTRQGTVIALLPNSTARRQPMDKGVIAVFKVQCRCSLLLTKQVATLEMRTELRKSTATRKMAGGTTGLGEGHEPHVLDAIELGVEVWAATLEETVARCWLKAD 1906
A R + Y +E I N+DETG+ Y+LLP+ TY E R TARGTKGMKAKDR ++ + A + P+ R A + +R P YFSQ WS + T + PV+L+ D C+ G DP Q V PN T + QPMD GVI K R LL + V+T+ LR+ RKMA GT GL EGH H+LDA EL W T+ RCW+KA+
Sbjct: 262 AIRRACSKYKVENIFNVDETGMYYRLLPKRTYLSTTEKRKTARGTKGMKAKDRVSAYMCTNATGTAKV---PMAIIGR-AKNPRCFRSSPSPLTYFSQANA---WSDNATFKKWWLEVFIPFIRKWTHEPVLLLMDGCASHGDLVDPRGQIEVSTYPPNCTYKYQPMDMGVIETTKRYYRKGLLDIR-VSTMSSVDTLRQQAKDRKMAAGTMGLAEGHPAHLLDAAELLEGAWDKVTPTTITRCWVKAE 502
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: A0A7S3XL47_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL47_HETAK) HSP 1 Score: 118 bits (295), Expect = 2.060e-25 Identity = 88/243 (36.21%), Postives = 120/243 (49.38%), Query Frame = 2
Query: 1193 DMEQICNIDETGLLYKLLPRWTYSLQNEDRLTARGTKGMKAKDRPPLHLHVHRAQVAALWL*PVWPRARDASSASAYR*MKWPWVYFSQQKVGPTWSSSTTRGTRSSCRTCTGGQASRPVVLITDNCSGDGKPADPTRQGTVIALLP-NSTARRQPMDKGVIAVFKVQCRCSLLLTKQVATLEMRTELRKSTATR--KMAGGTTGLGEGHEPHVLDAIELGVEVWAATL-EETVARCWLKADI 1909
D E I N+DETGL Y+LLPR TY LQ+E++ T RGTK MKAKDR + + H + P+ + A +R K P + + K S + R + + VVLI DNC G+ LP N+T+R QP D G+IAV K + + LL + LE + ++ A R K G G+ +G P+VLDA+EL EVW + EE + RCWLK I
Sbjct: 57 DPEDIYNMDETGLFYRLLPRRTYVLQSEEKKTTRGTKAMKAKDRLTVIVCCHATGTDKV---PLMDIGKSADPR-CFRLRK-PKIKYVANKSAWNNSKEMLKWLRMFKNHIKKTKPGKKVVLIMDNCGAHGQDLSEFEDVIDFKFLPPNTTSRFQPYDAGIIAVLKCRYKYRLLKIWALTVLEQDALMVQAKACRSVKYVNGMYGIHQGKPPNVLDALELLEEVWENDISEEFITRCWLKCTI 294
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: A0A485LC42_9STRA (Aste57867_19122 protein n=3 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC42_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.500e-15 Identity = 84/249 (33.73%), Postives = 118/249 (47.39%), Query Frame = 2
Query: 1184 AGYDMEQICNIDETGLLYKLLPRWTYSLQNEDRLTARGTKGMKAKDRPPLHLHVHRAQVAALWL*PVWPRARDASSASAYR*MKWPWVYFSQQKVGPTWSSSTT--RGTRSSCRTCTGGQASRPVVLITDNCSGDGKPADPTRQGTVIALLP-NSTARRQPMDKGVIAVFKVQCRCSLLLTKQVATLEM----RTELRKSTATRKMAGGTTGLGEGHEPHVLDAIELGVEVWAATLEETVARCWLKADI 1909
A Y ++ N+DE+GL Y+LLPR+T +E T RG K +AKDR + + L + + S +A +WP VY+SQQK W T + + + PV+L DN G + T G +A LP N T+ RQPMD G+IA K + R LLL + V+ L+ RT+L + A+ M G GL G V+DA L E W A T+A + KAD+
Sbjct: 168 ATYPPSRVYNMDESGLFYRLLPRYTLLASDETPETTRGRK--EAKDRVSIVFCANSDGTHKLPMTMIGKAKHPTCSTNA----EWPLVYYSQQKA---WVDRTIFLQWFKEVFVPRVRDVTNEPVLLFMDNAPGHF--TEYTVDGVRVAFLPPNCTSWRQPMDLGIIAATKKRYRF-LLLQQVVSFLDKTDDERTDLASAAAS--MRAGAAGLMFGKRATVMDAARLLKEAWDAVSCSTIANAFKKADM 402
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: A0A7J6VNH2_THATH (Tigger transposable element-derived protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6VNH2_THATH) HSP 1 Score: 80.5 bits (197), Expect = 5.780e-12 Identity = 73/257 (28.40%), Postives = 116/257 (45.14%), Query Frame = 2
Query: 1190 YDMEQICNIDETGLLYKLLPRWTYSLQNEDRLTARGTKGMKAKDRPPLHL-------------HVHRAQVAALWL*PVWPRARDASSASAYR*MKWPWVYFSQQKVGPTWSSSTTRGTRSSCRTCTGGQASRPVVLITDNCSGDGKPADPTRQGTVIALLP-NSTARRQPMDKGVIAVFKVQCRCSLLLTKQVAT---LEMRTELRKSTATRKMAGGTTGLGEGHEPHVLDAIELGVEVWAATLEETVARCWLKADI 1909
++ E + N+DETGL ++LLPR++ + ED T RG K K+KDR L + + + + A +WP + A A+ ++ W +F Q V R+ TG R V+L+ DN G + + R G +A P N T+ +QP D G+IA K R L K V L+ ++ RK ++M G G+ G+ H+LDA + W + ++ ++KADI
Sbjct: 170 FEHENVYNMDETGLFFRLLPRYSILMPQEDIATTRGKK--KSKDRISLIVCANATGTHKISCSFIGKPKEPACIKNRIWP-VPYFNQAKAWMDVETCWKWFEQIFVPEV-------------RSRTG----RRVLLLMDNAPGHFEAFE--RNGITVAFFPPNCTSWKQPCDMGIIAALKK--RYKYLYLKDVLDFYELDAESKHRKQEEGKRMRRGAAGVAYGNPAHLLDAALYVKQAWDSVSSVSIKNSFIKADI 402
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: A0A6G0X6C9_9STRA (HTH CENPB-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6C9_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 4.500e-10 Identity = 82/253 (32.41%), Postives = 114/253 (45.06%), Query Frame = 2
Query: 1184 AGYDMEQICNIDETGLLYKLLPRWTYSLQNEDRLTARGTKGMKAKDRPPLHLHVHRAQVAALWL*PVWPRARDASSASAYR*MKWPWVYFSQQKVGPTWSSST------TRGTRSSCRTCTGGQASRPVVLITDNCSGDGKPADPTRQGT-VIALLPNSTARRQPMDKGVIAVFKVQCRCSLLLTKQVATLEMRTELRKST----ATRKMAGGTTGLGEGHEPHVLDAIELGVEVWAATLEETVARCWLKADI 1909
A Y+ E + N+DE GL Y+LLPR T L ED TARG K K+KDR L V A P + AS A + KWP YFSQ+ W + + R T R V+LI DN P +G V+ L PN ++ +QP D G+IA K + + L L+K ++ +M E + T +TR+ GT G+ G +LDA V W +A C+ K ++
Sbjct: 106 ADYNPECVYNMDEMGLFYRLLPRHTLLLPEEDVGTARGEK--KSKDRVSL---VVCANATGSHKIPCAMIGKFASPACIHG-TKWPLPYFSQKNA---WMETALCVLWFNKVFVPEVRKRT----VRKVLLIMDNAPSH--PQYLESEGIRVVFLPPNCSSWKQPCDMGIIASLKKRYKY-LYLSKILSFYDMSPEEQALTNRIASTRRR--GTAGVDMGRPATLLDAANYVVTAWNDLAPSCIANCFRKTEL 340
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: A0A6G0X966_9STRA (HTH CENPB-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X966_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.480e-8 Identity = 71/229 (31.00%), Postives = 105/229 (45.85%), Query Frame = 2
Query: 1184 AGYDMEQICNIDETGLLYKLLPRWTYSLQNEDRLTARGTKGMKAKDRPPLHLHVHRAQVAALWL*PVWPRARDA-----SSASAYR*MKWPWVYFSQQKVGPTWSSSTTRGTRSSCRTCTGGQASRPVVLITDNCSGDGKPADPTRQGTVIALLP-NSTARRQPMDKGVIAVFKVQCRCSLLLTKQVATLEMRTELRKSTATR---KMAGGTTGLGEGHEPHVLDAIEL 1843
+ YD++ + N+DETGLLY++LP ++ +E ARG K +KDR L + H + L V + A + Y + W Q+V W + S R T S+ V+LI DN G + D IA +P N TAR QPMD+GVIA K R L +++ + +T + + + T M GT G+ G P + DAIE+
Sbjct: 179 SSYDLDFVYNMDETGLLYRVLPHYSVLCPSEGN-DARGKK--PSKDRVSLLVCTHATGTHKIPLLMVGKVKQPACFKGYAPRIPYTHQRRAWC---DQRVFQHWFH---KAFIPSVRART----SQRVLLILDNAPGHCQSID--HPSVEIAFMPPNITARDQPMDQGVIAALKK--RYKFKLYEELLRFQDKTNIERESLTNLALSMKRGTAGVEYGRPPQLRDAIEI 390
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: UPI001C7299C2 (tigger transposable element-derived protein 4-like n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C7299C2) HSP 1 Score: 63.5 bits (153), Expect = 7.760e-7 Identity = 66/245 (26.94%), Postives = 98/245 (40.00%), Query Frame = 2
Query: 1184 AGYDMEQICNIDETGLLYKLLPRWTYSLQNEDRLTARGTKGMKAKDRPPLHLHVHRAQVAALWL*PVWPRARDASSASAYR*MKWPWVYFSQQKVGPTWSSSTT--RGTRSSCRTCTGGQASRPVVLITDNCSGDGKPADPTRQGTVIALLPNSTARRQPMDKGVIAVFKVQCRCSLLLTKQVATLEMRTELRKSTATRKMAGGTTGLGEGHEPHVLDAIELGVEVWAATLEETVARCWLKADIS 1912
+GY + I N+DE GL + LLP T++ + E G G +K+R + + + L P+ + P Y S QK T T + S R + R +++ DNC+ K T L PNST+ QPMD+GVI VFK + L+ ++M G GE + ++L+AIEL V W +A C+ KA S
Sbjct: 79 SGYQPKNIFNMDECGLFFNLLPDKTFAFKGEP---CHG--GKNSKERLTILVGASMNGIEKL---PILVIGKSKKPRCFRNVKSLPCDYDSNQKSWMTIKIFETYLKKLDSKMR-----KEKRNIIIFVDNCAAHSKENKYTNIKLQF-LPPNSTSVLQPMDQGVIKVFKQHYKMRLV--------------------KRMLEGLENTGELKKVNMLEAIELIVSAWELITPSAIANCFRKAGFS 289
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: A0A6H5KEK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK9_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 2.260e-6 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 2
Query: 1190 YDMEQICNIDETGLLYKLLPRWTYSLQNEDRLTARGTKGMKAKDR 1324
Y +E I N+DETG+ Y+LLP+ TY E R TARGTKGMKAKDR
Sbjct: 209 YKVENIFNVDETGMYYRLLPKRTYLSTTEKRKTARGTKGMKAKDR 253
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: W4FWH3_9STRA (HTH CENPB-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWH3_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 3.160e-6 Identity = 75/236 (31.78%), Postives = 100/236 (42.37%), Query Frame = 2
Query: 1184 AGYDMEQICNIDETGLLYKLLPRWTYSLQNEDRLTARGTKGMKAKDRPPLHL-----HVHRAQVAALWL*PVWPRARDASSASAYR*MKWPWV--YFSQQKVGPTWSSSTTRGTRSSCRTCTGGQASRPVVLITDNCSGDGKPADPTRQGTVIALLP-NSTARRQPMDKGVIAVFKVQCRCSLL---LTKQVATLEMRTELRKSTATRKMAGGTTGLGEGHEPHVLDAIELGVEVW 1858
A Y + N+DETG +Y+ LPR +E ++ RG K KDR L L HR+ P A + Y K P + ++K G + +S + C SR V+L DN G D G IA LP N TA RQP+D GVIA K + R LL L+ T E++ +R+ A + G G+ G HVLDA L E W
Sbjct: 77 ATYPEHCVYNMDETGPIYRTLPRKRLLTPDEPPVSTRGRK--VPKDRVSLILCANSDGTHRS-----------PSVSSARPMNPYVSAKRPGLCTISPRRKRGLIERFAKPDAVQSLSQVC---GHSRQVLLFLDNAPGHF--CDMEIDGVRIAFLPPNCTAWRQPIDLGVIAATKKRYRYLLLSRALSFYEKTCEVQDAIREQAAL--LRAGVAGVDYGKPAHVLDAALLIKEAW 292
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: UPI001C728893 (tigger transposable element-derived protein 6-like n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C728893) HSP 1 Score: 54.7 bits (130), Expect = 5.490e-5 Identity = 38/123 (30.89%), Postives = 54/123 (43.90%), Query Frame = 2
Query: 1544 RPVVLITDNCSGDGKPADPTRQGTVIALLPNSTARRQPMDKGVIAVFKVQCRCSLLLTKQVATLEMRTELRKSTATRKMAGGTTGLGEGHEPHVLDAIELGVEVWAATLEETVARCWLKADIS 1912
R +++ DNC+ K T L PNST+ QPMD+GVI VFK + L+ ++M G GE + ++L+AIEL V W +A C+ KA S
Sbjct: 6 RNIIIFVDNCAAHSKENKYTNIKLQF-LPPNSTSVLQPMDQGVIKVFKQHYKMRLV--------------------KRMLEGLENTGELKKVNMLEAIELIVSAWELITPSAIANCFRKAGFS 107 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7946.1.1 >prot_P-wetherbeei_contig7946.1.1 ID=prot_P-wetherbeei_contig7946.1.1|Name=mRNA_P-wetherbeei_contig7946.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp MKWPWVYFSQQKVGPTWSSSTTRGTRSSCRTCTGGQASRPVVLITDNCSGback to top mRNA from alignment at P-wetherbeei_contig7946:102..2900+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7946.1.1 ID=mRNA_P-wetherbeei_contig7946.1.1|Name=mRNA_P-wetherbeei_contig7946.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2799bp|location=Sequence derived from alignment at P-wetherbeei_contig7946:102..2900+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7946:102..2900+ >mRNA_P-wetherbeei_contig7946.1.1 ID=mRNA_P-wetherbeei_contig7946.1.1|Name=mRNA_P-wetherbeei_contig7946.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig7946:102..2900+ (Phaeothamnion wetherbeei SAG_119_79)back to top |