prot_P-wetherbeei_contig7946.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7946.1.1
Unique Nameprot_P-wetherbeei_contig7946.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length163
Homology
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BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: UPI001C728893 (tigger transposable element-derived protein 6-like n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C728893)

HSP 1 Score: 55.8 bits (133), Expect = 9.170e-7
Identity = 38/123 (30.89%), Postives = 54/123 (43.90%), Query Frame = 0 
Query:   39 RPVVLITDNCSGDGKPADPTRQGTVIALLPNSTARRQPMDKGVIAVFKVQCRCSLLLTKQVATLEMRTELRKSTATRKMAGGTTGLGEGHEPHVLDAIELGVEVWAATLEETVARCWLKADIS 161
            R +++  DNC+   K    T       L PNST+  QPMD+GVI VFK   +  L+                    ++M  G    GE  + ++L+AIEL V  W       +A C+ KA  S
Sbjct:    6 RNIIIFVDNCAAHSKENKYTNIKLQF-LPPNSTSVLQPMDQGVIKVFKQHYKMRLV--------------------KRMLEGLENTGELKKVNMLEAIELIVSAWELITPSAIANCFRKAGFS 107
[Close]
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Match: UPI001C7299C2 (tigger transposable element-derived protein 4-like n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C7299C2)

HSP 1 Score: 55.8 bits (133), Expect = 4.060e-6
Identity = 38/123 (30.89%), Postives = 54/123 (43.90%), Query Frame = 0 
Query:   39 RPVVLITDNCSGDGKPADPTRQGTVIALLPNSTARRQPMDKGVIAVFKVQCRCSLLLTKQVATLEMRTELRKSTATRKMAGGTTGLGEGHEPHVLDAIELGVEVWAATLEETVARCWLKADIS 161
            R +++  DNC+   K    T       L PNST+  QPMD+GVI VFK   +  L+                    ++M  G    GE  + ++L+AIEL V  W       +A C+ KA  S
Sbjct:  188 RNIIIFVDNCAAHSKENKYTNIKLQF-LPPNSTSVLQPMDQGVIKVFKQHYKMRLV--------------------KRMLEGLENTGELKKVNMLEAIELIVSAWELITPSAIANCFRKAGFS 289
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7946.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001C7288939.170e-730.89tigger transposable element-derived protein 6-like... [more]
UPI001C7299C24.060e-630.89tigger transposable element-derived protein 4-like... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 39..155
e-value: 5.1E-5
score: 23.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7946contigP-wetherbeei_contig7946:1531..2325 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7946.1.1mRNA_P-wetherbeei_contig7946.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7946 102..2900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7946.1.1 ID=prot_P-wetherbeei_contig7946.1.1|Name=mRNA_P-wetherbeei_contig7946.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp
MKWPWVYFSQQKVGPTWSSSTTRGTRSSCRTCTGGQASRPVVLITDNCSG
DGKPADPTRQGTVIALLPNSTARRQPMDKGVIAVFKVQCRCSLLLTKQVA
TLEMRTELRKSTATRKMAGGTTGLGEGHEPHVLDAIELGVEVWAATLEET
VARCWLKADISC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom