mRNA_P-wetherbeei_contig7927.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7927.1.1 vs. uniprot
Match: A0A3C2B022_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B022_9ACTN) HSP 1 Score: 154 bits (390), Expect = 7.270e-45 Identity = 88/172 (51.16%), Postives = 114/172 (66.28%), Query Frame = 1
Query: 1 MRRTSKTWSEMDELTKPFLPDESVESATAVAIELRSRLVKVEQQALALYTAMASYAMIAQQSVDTARGEARADLDRSQATMIGLIEKLRTEVTARLDGAARRADTIAATAAVVPEDRLAALESQMSTMSTAMDAVRHENVELRRQLSGLVGEQMERDGWLVSSGSADSLTLR 516
MRR+ K+W E D+LTKPFL S E+ TAVA+ELR R+ KVEQQ LA YTA A+YA ++QQ V+ AR EARADLDR+Q+T+ GL++ LR+EV ARL R D+ AA +M M A++ EN+ LR+Q+ L+ QME DGWLVSSGSA L+L+
Sbjct: 1 MRRSDKSWLEFDDLTKPFLAPGSDETVTAVAVELRDRMTKVEQQVLAQYTATAAYATLSQQGVEQARAEARADLDRAQSTVFGLLDTLRSEVNARLTALENRPDSRAAXXXXXXXXXXXXXXERMRAMIGALEGCVRENMLLRQQVDELMRRQMEHDGWLVSSGSASELSLQ 172
BLAST of mRNA_P-wetherbeei_contig7927.1.1 vs. uniprot
Match: A0A7X9KL75_9ACTN (Uncharacterized protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KL75_9ACTN) HSP 1 Score: 149 bits (375), Expect = 1.720e-42 Identity = 86/173 (49.71%), Postives = 114/173 (65.90%), Query Frame = 1
Query: 7 RTSKTWSEMDELTKPFLPDESVESATAVAIELRSRLVKVEQQALALYTAMASYAMIAQQSVDTARGEARADLDRSQATMIGLIEKLRTEVTARLDGAARRADTIAATAAVVPED---RLAALESQMSTMSTAMDAVRHENVELRRQLSGLVGEQMERDGWLVSSGSADSLTLR 516
R +W ++DE PFL +S E+A +VA ELR R+VK+EQQ LA YTA A+YA +A+Q V+ AR EARADLDRSQ+T+IGL+++LR E+ RLDG R VP D RL A+E +M + A++ HEN+ LR+Q+ LV QM DGWLVS+G A L+LR
Sbjct: 11 RADNSWMQLDEQATPFLAPDSGENAMSVATELRDRMVKIEQQVLAQYTATAAYATLAKQGVEEARSEARADLDRSQSTIIGLLDRLRVEIGNRLDGIDARTP---GGGGAVPTDAAARLTAMEERMHGVLHALEGCVHENMMLRQQIDELVQRQMHSDGWLVSNGGASELSLR 180
BLAST of mRNA_P-wetherbeei_contig7927.1.1 vs. uniprot
Match: A0A6I3EY71_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3EY71_9ACTN) HSP 1 Score: 137 bits (344), Expect = 8.110e-38 Identity = 81/179 (45.25%), Postives = 114/179 (63.69%), Query Frame = 1
Query: 1 MRRTSKTWSEMDELTKPFLPDESVESATAVAIELRSRLVKVEQQALALYTAMASYAMIAQQSVDTARGEARADLDRSQATMIGLIEKLRTEVTARLDG--AARRADTIAATAAVVP------EDRLAALESQMSTMSTAMDAVRHENVELRRQLSGLVGEQMERDGWLVSSGSADSLTL 513
MRR+ K W E ++ T PFLP S ++ +V ELR R+ KVEQQ L+ YTA A+YA + QQ+V+ AR EARADLDRSQAT+IGL+++LR ++ RLD R + A A V P R++A+E Q++ ++ ++A H+N LR+Q+ L M R+GWLVS +D LTL
Sbjct: 1 MRRSEKNWMEYEQTTTPFLPPGSHDAVASVTTELRDRMAKVEQQVLSQYTATAAYATLGQQAVEQARAEARADLDRSQATIIGLLDRLRADLQQRLDALEVPRHLASSGAPAPVAPVAGGDLAGRISAMEEQLAALTGLLEATVHQNEHLRQQVDELQQRAMRREGWLVSGDPSD-LTL 178
BLAST of mRNA_P-wetherbeei_contig7927.1.1 vs. uniprot
Match: A0A539E643_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E643_9ACTN) HSP 1 Score: 116 bits (291), Expect = 6.310e-30 Identity = 71/170 (41.76%), Postives = 107/170 (62.94%), Query Frame = 1
Query: 4 RRTSKTWSEMDELTKPFLPDESVESATAVAIELRSRLVKVEQQALALYTAMASYAMIAQQSVDTARGEARADLDRSQATMIGLIEKLRTEVTARLDGAARRADTIAATAAVVPEDRLAALESQMSTMSTAMDAVRHENVELRRQLSGLVGEQMERDGWLVSSGSADSLTL 513
R+ T ++E T FLPDE+ + + A LR R+ K+E Q +A YTAMA+YA IAQ++ D + E+R+DLDRSQAT+IGLIE++R E ++GAARRA A + RLAA+E + ++ A+ L Q++ L+ ++M RDGWLV++G+A L++
Sbjct: 5 RQDDATMPFIEEATPDFLPDEAEQDSRLAAANLRERMAKLETQMMAQYTAMAAYASIAQRNSDMVQAESRSDLDRSQATVIGLIERVRRECADSIEGAARRAGGGADSDGA----RLAAIEQKFDGLTDALARSIEAQRLLGEQVTMLLDDKMHRDGWLVANGNATDLSM 170
BLAST of mRNA_P-wetherbeei_contig7927.1.1 vs. uniprot
Match: A0A7K1BB36_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1BB36_9ACTN) HSP 1 Score: 116 bits (290), Expect = 1.490e-29 Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = 1
Query: 52 FLPDESVESATAVAIELRSRLVKVEQQALALYTAMASYAMIAQQSVDTARGEARADLDRSQATMIGLIEKLRTEVTARLDGAARRADTIAATAAVVPEDRLAALESQMSTMSTAMDAVRHENVELRRQLSGLVGEQMERDGWLVSSGSADSLTL 513
FLPDE+ + + +LR R+ K+E Q +A YTAMA+YA IAQ + + AR EAR DLDRSQ+T+IGL+E++R E + G R + + A RLAALE + ++ A++ L Q++ L+ E+M+RDGWL + GSADSL+L
Sbjct: 40 FLPDEAAQESRLAGNDLRERVSKLETQMMAQYTAMAAYAQIAQNNTEAARAEARHDLDRSQSTVIGLVERVRRECADAIQGVQTRGGSGEGSDAA----RLAALEQRFDGLAAALERSIETQRALAEQVAALIEERMQRDGWLATDGSADSLSL 189 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7927.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7927.1.1 >prot_P-wetherbeei_contig7927.1.1 ID=prot_P-wetherbeei_contig7927.1.1|Name=mRNA_P-wetherbeei_contig7927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp MRRTSKTWSEMDELTKPFLPDESVESATAVAIELRSRLVKVEQQALALYTback to top mRNA from alignment at P-wetherbeei_contig7927:316..834+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7927.1.1 ID=mRNA_P-wetherbeei_contig7927.1.1|Name=mRNA_P-wetherbeei_contig7927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig7927:316..834+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7927:316..834+ >mRNA_P-wetherbeei_contig7927.1.1 ID=mRNA_P-wetherbeei_contig7927.1.1|Name=mRNA_P-wetherbeei_contig7927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig7927:316..834+ (Phaeothamnion wetherbeei SAG_119_79)back to top |