mRNA_P-wetherbeei_contig787.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Match: D8LHG6_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG6_ECTSI) HSP 1 Score: 189 bits (480), Expect = 6.990e-52 Identity = 102/213 (47.89%), Postives = 138/213 (64.79%), Query Frame = 1
Query: 1 SVVDAAMVARAGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIDVDIFC---ELRKFSPQQPANVKNREARPSSPARRDAAATAAEGATANSDDPPQQGPVRFELTYPGCPEGQGFLMEVASHAEWLAWVEAVGSSRHSKLRGEVDVLRTTNSILKDEVTRIKAEAATLRQYANQRHVTTLALRDEREQRRELLAELAVL 630
S VDAA+V+R + SGYL KLG N+ +WKRRFFVL+PITMLFYY++EHDTEPRGCID+D+F E+RK S A + +S + GAT+ + FEL GCP+G GF++E +W WVE++ + RH KL+ E+DV+R N +L +E++ ++ + AT R YA+QRHVT LALRDER + RE+ AELA L
Sbjct: 35 SRVDAALVSRGALRSGYLWKLGANVPKWKRRFFVLKPITMLFYYMSEHDTEPRGCIDLDLFDAVREVRKDSGGYSATTAAADTNNTS------GGSGKRGATSTA----------FELYRSGCPDGSGFMLEARGGEDWEQWVESIANGRHGKLQAEMDVMRGANKLLLEEISGLEQQVATFRGYADQRHVTVLALRDERHRSREVAAELAAL 231
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Match: A0A6H5KNE7_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNE7_9PHAE) HSP 1 Score: 186 bits (473), Expect = 6.420e-51 Identity = 104/215 (48.37%), Postives = 138/215 (64.19%), Query Frame = 1
Query: 1 SVVDAAMVARAGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIDVDIFC---ELRKFSPQQPANVKNREARPSS--PARRDAAATAAEGATANSDDPPQQGPVRFELTYPGCPEGQGFLMEVASHAEWLAWVEAVGSSRHSKLRGEVDVLRTTNSILKDEVTRIKAEAATLRQYANQRHVTTLALRDEREQRRELLAELAVL 630
S VDAA+++R + SGYL KLG N+ +WKRRFFVL+PITMLFYY++EHDTEPRGCID+D+F E+R+ S A E +S +R AA+TA FEL G P+G GF++E +W WVE++ + RH KL+ E+DV+R TN +L DE++ ++ + AT R YA QRHVT LALRDER + RE+ AELA L
Sbjct: 134 SRVDAALISRGALRSGYLWKLGVNVPKWKRRFFVLKPITMLFYYMSEHDTEPRGCIDLDLFDAVREVRRDSGGYSATTAAAETNNTSGGSGKRGAASTA------------------FELYRSGYPDGSGFMLEARGGEDWEQWVESIANGRHGKLQAEMDVMRGTNKLLLDEISGLEQQVATFRGYAEQRHVTVLALRDERHRSREVAAELAAL 330
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Match: A0A7S4HTX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HTX3_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 7.730e-13 Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 4 VVDAAMVARAGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIDVD 177
V AA AR +GYL KLG N+R++KRRFFVLRP T L+Y+L +D EPRGCI++D
Sbjct: 9 VETAADFARTAPRAGYLHKLGTNVRQYKRRFFVLRPSTHLYYFLGPNDAEPRGCIELD 66
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Match: A0A7S2Q5J3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q5J3_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 9.440e-13 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 13 AAMVARAGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIDVDIFCE 189
A A++ HSGYL KLG NI +KRRFFVL+P T L+Y+++ +D EPRGCID+D F E
Sbjct: 43 AITFAKSAPHSGYLKKLGKNIHSFKRRFFVLKPSTHLYYFMSPNDVEPRGCIDLDNFVE 101
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Match: A0A835YN48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN48_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.130e-12 Identity = 32/60 (53.33%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 31 AGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIDVDIFCELRKFSPQ 210
A +H+GYL+KLG +++R+KRRF LRP+T+L YY+ E DTEPRGCID+D + + + Q
Sbjct: 56 APLHAGYLLKLGTSVKRFKRRFCALRPMTLLLYYMHEGDTEPRGCIDIDQYPHITSCTDQ 115
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Match: A0A7S3Q480_9STRA (Hypothetical protein n=3 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q480_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 5.440e-12 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 1 SVVDAAMVARAGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIDVDI 180
S + AA AR +GYL KLGG++ +KRRFFVL+P T L+Y+L D EPRGCID+D+
Sbjct: 520 SSITAASFARHAPKAGYLSKLGGSVSEYKRRFFVLKPTTCLYYFLDPSDEEPRGCIDLDL 579
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Match: K0T095_THAOC (PH domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T095_THAOC) HSP 1 Score: 73.2 bits (178), Expect = 1.720e-11 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 13 AAMVARAGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIDVDIF-------CELRKF 201
A AR+ SGYL K+G NI ++KRRFFVL+P T L+Y+L+ D EPRGCIDVD+ CE+++
Sbjct: 118 ALSFARSAPISGYLRKMGKNITQFKRRFFVLKPSTHLYYFLSSSDNEPRGCIDVDMLTNEGREGCEVKEI 187
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Match: A0A7S4EE23_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EE23_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.960e-11 Identity = 49/123 (39.84%), Postives = 64/123 (52.03%), Query Frame = 1
Query: 13 AAMVARAGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIDVDIFCELRKFSPQQPANVKNREARPSSPARRDAAATAAEGATANSDDPPQQGPVRFELTYPGCPEGQGFL 381
AA +ARA V +GYL LG N +WKRRFFVL+P TML+Y+ ++ D EP GC+DV+ F + Q V AR AA A+ A P+ F L PG EG G++
Sbjct: 27 AARLARASVKAGYLHGLGEN-HQWKRRFFVLKPTTMLYYFGSDADEEPLGCVDVEAFTSVSCREVHQDGRVTIELAR--------AAPPGADNAK----------PLIFSLRAPGESEGYGWI 130
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Match: A0A7S2E8R1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E8R1_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.390e-11 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 1
Query: 13 AAMVARAGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIDVD 177
AA AR+ +G+L KLG NI ++KRRFFVL+P T L+Y+++ D+EPRGCID+D
Sbjct: 42 AAAFARSAPKAGFLSKLGKNIHQYKRRFFVLKPTTHLYYFVSPTDSEPRGCIDLD 96
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Match: A0A7S4ULH5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4ULH5_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 6.510e-11 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 1
Query: 13 AAMVARAGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIDVD 177
AA AR+ +G+L KLG NI ++KRRFFVL+P T L+Y+++ D+EPRGCID+D
Sbjct: 183 AAAFARSAPKAGFLSKLGKNIHQYKRRFFVLKPTTHLYYFVSPTDSEPRGCIDLD 237 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig787.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig787.1.1 >prot_P-wetherbeei_contig787.1.1 ID=prot_P-wetherbeei_contig787.1.1|Name=mRNA_P-wetherbeei_contig787.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=204bp MVARAGVHSGYLMKLGGNIRRWKRRFFVLRPITMLFYYLTEHDTEPRGCIback to top mRNA from alignment at P-wetherbeei_contig787:124..753- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig787.1.1 ID=mRNA_P-wetherbeei_contig787.1.1|Name=mRNA_P-wetherbeei_contig787.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=630bp|location=Sequence derived from alignment at P-wetherbeei_contig787:124..753- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig787:124..753- >mRNA_P-wetherbeei_contig787.1.1 ID=mRNA_P-wetherbeei_contig787.1.1|Name=mRNA_P-wetherbeei_contig787.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=612bp|location=Sequence derived from alignment at P-wetherbeei_contig787:124..753- (Phaeothamnion wetherbeei SAG_119_79)back to top |