mRNA_P-wetherbeei_contig7829.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Match: D7G824_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G824_ECTSI) HSP 1 Score: 124 bits (312), Expect = 1.090e-30 Identity = 74/145 (51.03%), Postives = 91/145 (62.76%), Query Frame = 1
Query: 10 WSAIRALMLPLWVRNVALLRRVTEDVAGATFRRTKDPMAVAIFYVALGKDKTLLQLGRLDRP---------------------------GRLEKLLSRDFRTPEGRAVAEKNAYVLLRRRNFLAAAAVFLLARPAMLREALQVCL 363
WS A++LPLWVR+ A L+RV E VA ATF + +D MA A+F+ ALGK+K LL L + DR RLEKLL+ DF +P GR+ AEKNAYVLLR+R F +AAAVFLL RPAM++EALQV L
Sbjct: 1776 WSDASAMLLPLWVRDAAELQRVAESVASATFLQDRDLMAAAMFFAALGKEKKLLALAKADRGFVGQRNLGGGEGDINSTSGRSQGATQGQRLEKLLAHDFSSPRGRSAAEKNAYVLLRKRKFKSAAAVFLLPRPAMVKEALQVIL 1920
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Match: A0A1V9Y649_9STRA (Rav1p_C domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y649_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.310e-19 Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = 1
Query: 1 QSTWSAIRALMLPLWVRNVALLRRVTEDVAGATFRRTKDPMAVAIFYVALGKDKTL---LQLGRLDRPGRLEKLLSRDFRTPEGRAVAEKNAYVLLRRRNFLAAAAVFLLARPAMLREALQVCL 363
Q+ W +R + L LWVR+ A LR + E +A TF RT+D M+V + Y+ALGK L ++ RLD L + L DF + A +NAY LLR++ + AAA FLL +P L+EAL++CL
Sbjct: 1298 QALWDDLRPMWLGLWVRDPAKLREIVERMAKCTFMRTRDAMSVCLLYLALGKKSVLGALAKVSRLDSNKTLAEFLLHDFTEERWSSAAVRNAYSLLRKKQYDLAAAFFLLPQPPRLQEALRICL 1421
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Match: A0A067CKY2_SAPPC (C2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKY2_SAPPC) HSP 1 Score: 90.5 bits (223), Expect = 1.090e-18 Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 1
Query: 1 QSTWSAIRALMLPLWVRNVALLRRVTEDVAGATFRRTKDPMAVAIFYVALGKDKTLLQLGRLDRPGRLEKLLSRDFRTPEGRAVAEKNAYVLLRRRNFLAAAAVFLLARPAMLREALQVCL 363
Q+ W ++ + L LWVR+ A LR + E +A TF RT+D M+V + Y+ALGK L L ++ R + L DF + A +NAY LLR++ + AAA FLL +P L+EAL++C+
Sbjct: 1307 QALWDDLKPMWLGLWVRDPAKLREIVERMAKCTFMRTRDAMSVCLLYLALGKKNVLSALAKVSRVESNKTLADYDFSEERWSSAAVRNAYSLLRKKQYDLAAAFFLLPQPPRLQEALRICI 1427
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Match: A0A8K1FBS2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBS2_PYTOL) HSP 1 Score: 85.5 bits (210), Expect = 6.190e-17 Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 1 QSTWSAIRALMLPLWVRNVALLRRVTEDVAGATFRRTKDPMAVAIFYVALGKDK---TLLQLGRLDRPGRLEKLLSRDFRTPEGRAVAEKNAYVLLRRRNFLAAAAVFLLARPAMLREALQ 354
Q+TW IR + L LWVR++ LR + E +A + + R++D M V +FYVALGK L ++ +L+ L L DF R A KNAY LL ++ + AAAA FLL P L+EAL+
Sbjct: 1345 QATWEEIRPMWLGLWVRDIKDLRAIIERLAKSIYMRSRDAMDVVLFYVALGKKNILGALSKISKLESNKNLSIFLENDFTQDRWRNAAIKNAYSLLGKKQYEAAAAFFLLCEPPRLQEALR 1465
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Match: A0A7S2EUC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EUC3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.870e-16 Identity = 45/120 (37.50%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 10 WSAIRALMLPLWVRNVALLRRVTEDVAGATFRRTKDPMAVAIFYVALGKDKTLLQLGRLDRPGRLEKLL----SRDFRTPEGRAVAEKNAYVLLRRRNFLAAAAVFLLARPAMLREALQV 357
WS R ++LP W+R+ LR+ +E++A + F++ +D + A+FYV + +++ + D K + DF + G+ AEKNAY LLR+R +LAAA FLL P ML AL V
Sbjct: 1105 WSTARGILLPFWLRSDECLRKTSEEIAQSIFKQKRDILECALFYVIIRNTRSMRNMAATDNSESGRKFFKFTTNYDFTSERGKKAAEKNAYSLLRKRKYLAAATFFLLPEPPMLNTALDV 1224
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Match: A0A6G0WU56_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU56_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.880e-15 Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 1 QSTWSAIRALMLPLWVRNVALLRRVTEDVAGATFRRTKDPMAVAIFYVALGKDKTL---LQLGRLDRPGRLEKLLSRDFRTPEGRAVAEKNAYVLLRRRNFLAAAAVFLLARPAMLREALQV 357
Q+ W +R L LWVR+ LR + E VA TF RTKD M V + Y+AL K L ++ RL+ L L+ DF A +NAY LLR++ + AAA FLL P L+E+L++
Sbjct: 1273 QAVWEDLRPLWPGLWVRDPLKLRSIVEKVAKCTFTRTKDAMTVCLLYIALNKQNVLGALAKVSRLESNKTLADFLAHDFSEERWSHAAIRNAYSLLRKKQYELAAAFFLLPHPPRLQESLRI 1394
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Match: A0A7S3V901_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V901_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.550e-15 Identity = 46/121 (38.02%), Postives = 72/121 (59.50%), Query Frame = 1
Query: 7 TWSAIRALMLPLWVRNVALLRRVTEDVAGATFRRTKDPMAVAIFYVALGKDKTLLQLGRLDRP--GR--LEKLLSRDFRTPEGRAVAEKNAYVLLRRRNFLAAAAVFLLARPAMLREALQV 357
TW R+L +P W+R+ L+ ++E++A ++ + D + A+FYV G + L + DR GR L+ + +F + GR AEKNA+ LLR+R + AAAA FLLA P M++ AL +
Sbjct: 539 TWDIARSLRIPFWLRSDDALKSISEEIAQTKYKESMDVVECALFYVITGNMRMLKTVAAADRKTSGRTFLQFVTKYNFSSQRGRMAAEKNAFSLLRKRKYGAAAAFFLLAEPPMMKSALNI 659
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Match: A0A6H5K928_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K928_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 2.590e-15 Identity = 53/113 (46.90%), Postives = 64/113 (56.64%), Query Frame = 1
Query: 106 RTKDPMAVAIFYVALGKDKTLLQLGRLDRP---------------------------GRLEKLLSRDFRTPEGRAVAEKNAYVLLRRRNFLAAAAVFLLARPAMLREALQVCL 363
RT A+F+ ALGK+K LL L + DR RLEKLL+ DF +P GR+ AEKNAYVLLR+R F +A AVFLL RPAM++EALQV L
Sbjct: 1899 RTPAGCWAAMFFAALGKEKKLLALAKADRGFVGQRNLSGGEGDINSTSGRSQGATQGQRLEKLLAHDFSSPRGRSAAEKNAYVLLRKRKFKSAVAVFLLPRPAMVKEALQVIL 2011
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Match: A0A3L6VL01_9STRA (Rav1p_C domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VL01_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 4.520e-15 Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 10 WSAIRALMLPLWVRNVALLRRVTEDVAGATFRRTKDPMAVAIFYVALGKDKTLLQLGRLDRPGRLEKLLSRDFRTPEGRAVAEKNAYVLLRRRNFLAAAAVFLLA 324
W ++ L +P W+ ++A L++ TE +A + TKDP AVA+++V LGK + L + RL ++ LL+ DF +A A KNA+VL ++ +L AAA FLLA
Sbjct: 155 WHRMQKLRVPFWLDDIARLKQTTERMANRAYAATKDPFAVALYFVLLGKTRLLSNVFRLAHETKIADLLANDFDDDRWKAAAIKNAFVLKSKQRYLLAAAFFLLA 259
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Match: A0A3R6X534_9STRA (Rav1p_C domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6X534_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 4.570e-15 Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 10 WSAIRALMLPLWVRNVALLRRVTEDVAGATFRRTKDPMAVAIFYVALGKDKTLLQLGRLDRPGRLEKLLSRDFRTPEGRAVAEKNAYVLLRRRNFLAAAAVFLLA 324
W ++ L +P W+ ++A L++ TE +A + TKDP AVA+++V LGK + L + RL ++ LL+ DF +A A KNA+VL ++ +L AAA FLLA
Sbjct: 674 WHRMQKLRVPFWLDDIARLKQTTERMANRAYAATKDPFAVALYFVLLGKTRLLSNVFRLAHETKIADLLANDFDDDRWKAAAIKNAFVLKSKQRYLLAAAFFLLA 778 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7829.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7829.2.1 >prot_P-wetherbeei_contig7829.2.1 ID=prot_P-wetherbeei_contig7829.2.1|Name=mRNA_P-wetherbeei_contig7829.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp MLPLWVRNVALLRRVTEDVAGATFRRTKDPMAVAIFYVALGKDKTLLQLGback to top mRNA from alignment at P-wetherbeei_contig7829:2516..2968+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7829.2.1 ID=mRNA_P-wetherbeei_contig7829.2.1|Name=mRNA_P-wetherbeei_contig7829.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig7829:2516..2968+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7829:2516..2968+ >mRNA_P-wetherbeei_contig7829.2.1 ID=mRNA_P-wetherbeei_contig7829.2.1|Name=mRNA_P-wetherbeei_contig7829.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig7829:2516..2968+ (Phaeothamnion wetherbeei SAG_119_79)back to top |