prot_P-wetherbeei_contig7774.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7774.1.1
Unique Nameprot_P-wetherbeei_contig7774.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length130
Homology
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Match: S0F301_CHOCR (RNA-dependent DNA polymerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F301_CHOCR)

HSP 1 Score: 90.9 bits (224), Expect = 1.090e-18
Identity = 52/132 (39.39%), Postives = 78/132 (59.09%), Query Frame = 0
Query:    1 MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFD-FEDCAALQLLKAIYGLKQAAYLWHLCLRSWLLSD-GFRAVDADCCVFVRGDVSPVMAAGGKGTYLVVGIHVDDLLAAGAPTSAIAGFK 130
            +R + AL A FD E+HQMDVVTA+LN  L + ++M  P G  D  +  +  +LLKAIYGLKQA   WH  +  +L+++ GF    +D C+++R   + +M         ++ ++VDDLL AG+   AI   K
Sbjct:  940 IRLLLALVAHFDLELHQMDVVTAFLNGDLHEEIYMEQPEGCIDKVKPDSVCKLLKAIYGLKQAHRQWHSKIDEFLITELGFNTTRSDPCLYIRRQGNVIM---------IIALYVDDLLLAGSDLEAILWMK 1062          
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Match: A0A177TJ72_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177TJ72_9BASI)

HSP 1 Score: 88.2 bits (217), Expect = 9.150e-18
Identity = 54/134 (40.30%), Postives = 75/134 (55.97%), Query Frame = 0
Query:    1 MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFDFEDCAALQLL----KAIYGLKQAAYLWHLCLRSWLLSDGFRAVDADCCVFVRGDVSPVMAAGGKGTYLVVGIHVDDLLAAGAPTSAIAGFK 130
            +R + ALAA FD+ VHQ+DVVTAYL   L+D+++MR PPG   FE   +  LL    +A+YGLKQ+   W+  LRS L+  GF     D  +F+ G  +         T L+V ++VDD+L        I  FK
Sbjct:  383 IRTLLALAAHFDWHVHQLDVVTAYLYGLLSDVVYMRQPPG---FEKVGSEHLLCRLRRALYGLKQSGREWYFTLRSALIELGFEQSTVDPAIFIFGTGA---------TALIVAVYVDDVLVLSKSIEDIKAFK 504          
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 88.2 bits (217), Expect = 9.540e-18
Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = 0
Query:    1 MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFDFEDCAAL-QLLKAIYGLKQAAYLWHLCLRSWLLSDGFRAVDADCCVFVRGDVSPVMAAGGKGTYLVVGIHVDDLL 117
            +R + ALA   D+E+HQMDV TA+L   LTD ++M+ P G    E+   + +L K++YGLKQ+A  W+  L S+L S G++ V AD C++++     V    GK  ++++ IHVDD+L
Sbjct:  926 IRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKS----VKLQNGKINFVILSIHVDDIL 1039          
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Match: A0A094GNV2_9PEZI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Pseudogymnoascus sp. VKM F-4519 (FW-2642) TaxID=1420914 RepID=A0A094GNV2_9PEZI)

HSP 1 Score: 87.0 bits (214), Expect = 2.430e-17
Identity = 54/131 (41.22%), Postives = 76/131 (58.02%), Query Frame = 0
Query:    1 MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFDFED-CAALQLLKAIYGLKQAAYLWHLCLRSWLLSDGFRAVDADCCVFVRGDVSPVMAAGGKGTYLVVGIHVDDLLAAGAPTSAIAGFK 130
            +R + ALAA FD+E+ QMD VTA+LN+ L + +W+++P G   +E+   A +L K +YGLKQAA LW L +R  L   G++ + AD C++             KG Y  V  HVDD L  GA  +AI   K
Sbjct: 1032 IRILIALAAHFDWEIEQMDAVTAFLNSRLDENVWIQLPTG---YENGTRACRLKKGLYGLKQAARLWALEVRKLLRELGYQMIPADECLYWHPK---------KGVY--VATHVDDFLVLGADINAIQELK 1148          
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Match: A5DZY5_LODEL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DZY5_LODEL)

HSP 1 Score: 86.7 bits (213), Expect = 3.120e-17
Identity = 55/131 (41.98%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    1 MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFDFEDCA----ALQLLKAIYGLKQAAYLWHLCLRSWLLSDGFRAVDADCCVFVR-GDVSPVMAAGGKGTYLVVGIHVDDLLAAGAPTSAI 126
            MR + ALAA    E+HQMDV TA+LNAPL + ++M+   G   +ED A      +L K++YGLKQA   W+L +   LL+ GF+   A+ C+++R    S VM A          ++VDDLL AG+P  AI
Sbjct:  524 MRIMLALAAHARMEIHQMDVTTAFLNAPLEEEIYMKQIEG---YEDPAFPDKVFKLNKSLYGLKQAPQAWNLQIHDVLLALGFQRNQAEYCLYIRRSSASTVMVA----------LYVDDLLIAGSPRRAI 641          
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Match: A0A7D9KZC9_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KZC9_PARCT)

HSP 1 Score: 85.9 bits (211), Expect = 4.040e-17
Identity = 47/118 (39.83%), Postives = 75/118 (63.56%), Query Frame = 0
Query:    1 MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFDFEDCAAL-QLLKAIYGLKQAAYLWHLCLRSWLLSDGFRAVDADCCVFVRGDVSPVMAAGGKGTYLVVGIHVDDLL 117
            +R + ALA E+D EVHQMDV TA+LN  +   ++M  P G  D +    L +L K+IYGLKQ+A  W+  L  +L S G+R   AD C++V+     V   GG+ +++++G+++DD++
Sbjct:   75 LRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMEQPEGFVDPDKPDYLCKLQKSIYGLKQSARCWNDTLDGYLKSRGYRKSGADGCIYVKS----VKKDGGRISFVILGVYMDDII 188          
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Match: A0A7D9ESN8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ESN8_PARCT)

HSP 1 Score: 86.3 bits (212), Expect = 4.500e-17
Identity = 47/118 (39.83%), Postives = 76/118 (64.41%), Query Frame = 0
Query:    1 MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFDFEDCAAL-QLLKAIYGLKQAAYLWHLCLRSWLLSDGFRAVDADCCVFVRGDVSPVMAAGGKGTYLVVGIHVDDLL 117
            +R + ALA E+D EVHQMDV TA+LN  +   ++M+ P G  + +    L +L K+IYGLKQ+A  W+  L  +L S G+R   AD C++V+     V   GG+ +++++G++VDD++
Sbjct:  957 LRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQPEGFVNPDKPDYLCKLQKSIYGLKQSARCWNDTLNGYLKSRGYRKSGADGCIYVKS----VKKDGGRISFVILGVYVDDII 1070          
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Match: A0A7D9LDA1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LDA1_PARCT)

HSP 1 Score: 85.5 bits (210), Expect = 7.300e-17
Identity = 47/118 (39.83%), Postives = 76/118 (64.41%), Query Frame = 0
Query:    1 MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFDFEDCAAL-QLLKAIYGLKQAAYLWHLCLRSWLLSDGFRAVDADCCVFVRGDVSPVMAAGGKGTYLVVGIHVDDLL 117
            +R + ALA E+D EVHQMDV TA+LN  +   ++M+ P G  + +    L +L K+IYGLKQ+A  W+  L  +L S G+R   AD C++V+     V   GG+ +++++G++VDD++
Sbjct:  112 LRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQPEGFVNPDKPDYLCKLQKSIYGLKQSARCWNDTLDGYLKSRGYRKSGADGCIYVKS----VKKDGGRISFVILGVYVDDII 225          
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Match: A0A7D9I9A2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I9A2_PARCT)

HSP 1 Score: 85.5 bits (210), Expect = 8.170e-17
Identity = 47/118 (39.83%), Postives = 76/118 (64.41%), Query Frame = 0
Query:    1 MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFDFEDCAAL-QLLKAIYGLKQAAYLWHLCLRSWLLSDGFRAVDADCCVFVRGDVSPVMAAGGKGTYLVVGIHVDDLL 117
            +R + ALA E+D EVHQMDV TA+LN  +   ++M+ P G  + +    L +L K+IYGLKQ+A  W+  L  +L S G+R   AD C++V+     V   GG+ +++++G++VDD++
Sbjct:  501 LRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQPEGFVNPDKPDYLCKLQKSIYGLKQSARCWNDTLDGYLKSRGYRKSGADGCIYVKS----VKKDGGRISFVILGVYVDDII 614          
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Match: A0A177T395_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177T395_9BASI)

HSP 1 Score: 84.7 bits (208), Expect = 1.540e-16
Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 0
Query:    1 MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFDFEDCAA----LQLLKAIYGLKQAAYLWHLCLRSWLLSDGFRAVDADCCVFVRGDVSPVMAAGGKGTYLVVGIHVDDLLAAGAPTSAIAGFK 130
            +R + ALAA F++ VHQ+DVVTAYL   L+D+++MR PPG   FE   +     +L +A+YGLKQ+   W+  LRS L+  GF     D  +F+ G  +         + LVV ++VDD+L        I  FK
Sbjct:  693 IRTLLALAAHFEWHVHQLDVVTAYLYGLLSDVVYMRQPPG---FEKVGSEHLYCRLRRALYGLKQSGREWYFTLRSALIELGFEQSTVDPAIFIFGSGA---------SALVVAVYVDDVLVLSKSIDDIEAFK 814          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7774.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
S0F301_CHOCR1.090e-1839.39RNA-dependent DNA polymerase n=1 Tax=Chondrus cris... [more]
A0A177TJ72_9BASI9.150e-1840.30Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9IUY0_PARCT9.540e-1840.68Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A094GNV2_9PEZI2.430e-1741.22Integrase catalytic domain-containing protein (Fra... [more]
A5DZY5_LODEL3.120e-1741.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9KZC9_PARCT4.040e-1739.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9ESN8_PARCT4.500e-1739.83Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9LDA1_PARCT7.300e-1739.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9I9A2_PARCT8.170e-1739.83Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A177T395_9BASI1.540e-1638.81Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..130
e-value: 7.5E-24
score: 84.7
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 2..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7774contigP-wetherbeei_contig7774:45..434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7774.1.1mRNA_P-wetherbeei_contig7774.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7774 40..434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7774.1.1 ID=prot_P-wetherbeei_contig7774.1.1|Name=mRNA_P-wetherbeei_contig7774.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp
MRFIFALAAEFDFEVHQMDVVTAYLNAPLTDLLWMRVPPGPFDFEDCAAL
QLLKAIYGLKQAAYLWHLCLRSWLLSDGFRAVDADCCVFVRGDVSPVMAA
GGKGTYLVVGIHVDDLLAAGAPTSAIAGFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2