mRNA_P-wetherbeei_contig10223.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Match: A0A3C1L326_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C1L326_9ACTN) HSP 1 Score: 191 bits (485), Expect = 5.250e-60 Identity = 91/134 (67.91%), Postives = 110/134 (82.09%), Query Frame = 1 Query: 22 HDAATLRRRRILSRSWGAFVVAWSFVRALIVWAALGDYGINPWIYLSIDLASSIVDAFTTPRMVLSFIDDQYKTAAKWGLISLFVFIIPDLYIFLGTKTLPKRVIVVICLIILLTFSIAVVATVRKVREGRRLR 423 HDA TL+RR+ LSR+W VV WS +R +IVWAA+GDYG+NPWIYLS+DL+S+IVDAFTTPRMVLSFIDD +K A KW ISL FI+PDLYIFLGT+TLP R+IVV+CLII LT +I V+ VR++R GR R Sbjct: 8 HDAETLQRRKRLSRTWAGIVVVWSLIRTVIVWAAVGDYGLNPWIYLSLDLSSAIVDAFTTPRMVLSFIDDHFKQAIKWAFISLVAFIVPDLYIFLGTRTLPTRIIVVVCLIIGLTLTIGVIGVVRRIRRGRNER 141
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Match: A0A6I3F0Y1_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3F0Y1_9ACTN) HSP 1 Score: 186 bits (472), Expect = 6.250e-58 Identity = 89/142 (62.68%), Postives = 112/142 (78.87%), Query Frame = 1 Query: 13 LVHHDAATLRRRRILSRSWGAFVVAWSFVRALIVWAALGDYGINPWIYLSIDLASSIVDAFTTPRMVLSFIDDQYKTAAKWGLISLFVFIIPDLYIFLGTKTLPKRVIVVICLIILLTFSIAVVATVRKVREGRRLRLAEKA 438 L HHD TL+RRR LSR+W VV WS +R +IVWAA+GDYG+NPWIYLS+DL ++++DA +TPRMVL+FIDD + A +W LISL VFIIPDLYIFLGT+TLPKR+I+VIC II LT ++ V RK+++GR LR A A Sbjct: 5 LRHHDPETLQRRRRLSRTWAGIVVVWSLIRTVIVWAAVGDYGLNPWIYLSLDLTAAVIDALSTPRMVLNFIDDHMRKAIEWALISLVVFIIPDLYIFLGTRTLPKRIILVICAIIGLTLTVGVYGVTRKIKKGRALRAAALA 146
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Match: A0A3C2B156_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B156_9ACTN) HSP 1 Score: 185 bits (470), Expect = 1.530e-57 Identity = 87/139 (62.59%), Postives = 109/139 (78.42%), Query Frame = 1 Query: 13 LVHHDAATLRRRRILSRSWGAFVVAWSFVRALIVWAALGDYGINPWIYLSIDLASSIVDAFTTPRMVLSFIDDQYKTAAKWGLISLFVFIIPDLYIFLGTKTLPKRVIVVICLIILLTFSIAVVATVRKVREGRRLRLA 429 L HHD ATL+RR++LSR+W VV WS +RALIVWAA+GDYG+NPW+YL IDL ++ +D +TTPRMVL+FIDD YK A KW ISL VFIIPDLYIF GT LPK V+++IC+II TF +AV + V K+R+GR + A Sbjct: 3 LHHHDPATLKRRKVLSRTWAGMVVGWSLIRALIVWAAVGDYGLNPWVYLVIDLIAAGIDGYTTPRMVLAFIDDHYKQAVKWAAISLIVFIIPDLYIFFGTSELPKHVLIIICIIISATFLLAVWSVVMKIRKGRAAKAA 141
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Match: A0A7X9KIR5_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KIR5_9ACTN) HSP 1 Score: 145 bits (366), Expect = 2.260e-42 Identity = 66/94 (70.21%), Postives = 78/94 (82.98%), Query Frame = 1 Query: 22 HDAATLRRRRILSRSWGAFVVAWSFVRALIVWAALGDYGINPWIYLSIDLASSIVDAFTTPRMVLSFIDDQYKTAAKWGLISLFVFIIPDLYIF 303 HDA TL+RR+ LSR+W VV WS +R +IVWAA+GDYG+NPWIYLS+DL+S+IVDAFTTPRMVLSFIDD +K A KW ISL FI+PDLY F Sbjct: 8 HDAETLQRRKRLSRTWAGIVVVWSLIRTVIVWAAVGDYGLNPWIYLSLDLSSAIVDAFTTPRMVLSFIDDHFKQAIKWAFISLVAFIVPDLYAF 101
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Match: A0A2G4GMJ1_9ACTN (Uncharacterized protein n=5 Tax=root TaxID=1 RepID=A0A2G4GMJ1_9ACTN) HSP 1 Score: 106 bits (264), Expect = 1.450e-26 Identity = 55/131 (41.98%), Postives = 77/131 (58.78%), Query Frame = 1 Query: 25 DAATLRRRRILSRSWGAFVVAWSFVRALIVWAALGDYGINPWIYLSIDLASSIVDAFTTPRMVLSFIDDQYKTAAKWGLISLFVFIIPDLYIFLGTKTLPKRVIVVICLIILLTFSIAVVATVRKVREGRR 417 +A +RR+L R W V+A+ VRA++VW ALG YG+NPWIYL +D+ SS A T R+V S ID ++ A WGL++ F+IPDLYI + + +P V +I II + K+R GRR Sbjct: 4 SSARSAKRRLLERLWVIVVIAYGAVRAIVVWKALGQYGVNPWIYLVLDVTSSWPYAVATARLVTSVIDREFSRARSWGLLAAITFLIPDLYILVVARHVPTEVYAIIIAIIXXXXXXXXXSLFIKIRNGRR 134
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Match: A0A6I3CIG0_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3CIG0_9ACTN) HSP 1 Score: 93.6 bits (231), Expect = 1.360e-21 Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 43 RRRILSRSWGAFVVAWSFVRALIVWAALGDYGINPWIYLSIDLASSIVDAFTTPRMVLSFIDDQYKTAAKWGLISLFVFIIPDLYIFLGTKTLPKRVIVV 342 +RR+L R W V+ + RA +VW ALG YG+NPW+YL++D+ SS T R+V S ID ++ A WG+I+ F++PDLYI + + +P V V+ Sbjct: 10 KRRLLERLWVMVVILYGAGRAFVVWKALGKYGVNPWLYLALDITSSWPYGVATARLVTSVIDREFSRARTWGVIAAIAFLLPDLYILVSARHVPTEVYVI 109
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Match: A0A7K0T152_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K0T152_9ACTN) HSP 1 Score: 79.0 bits (193), Expect = 6.250e-16 Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 1 PMPILVHHDAATLRRRRILSRSWGAFVVAWSFVRALIVWAALGDYGINPWIYLSIDLASSIVDAFTTPRMVLSFIDDQYKTAAKWGLISLFVFIIPDLYIFLGTKTLP 324 P +L + + A RR+ + R W V+AWS R+L+V YG+NP IY +ID SSI A+ + + +LS+ID + + WGL+++ +F +PDLYI K +P Sbjct: 3 PRDLLHYLEDAESRRKGV--RVWILLVLAWSLTRSLVVAKVFDAYGLNPRIYFAIDFLSSIPYAYASAQSLLSYIDKKPNKSIAWGLLTIVMFYLPDLYIVFAAKHVP 108
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Match: A0A524B4T0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B4T0_9ACTN) HSP 1 Score: 75.5 bits (184), Expect = 1.130e-14 Identity = 41/123 (33.33%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 46 RRILSRSWGAFVVAWSFVRALIVWAALGDYGINPWIYLSIDLASSIVDAFTTPRMVLSFIDDQYKTAAKWGLISLFVFIIPDLYIFLGTKTLPKRV---IVVICLIILLTFSIAVVATVRKVR 405 R +L+R W V + FVR L+VW L DYGI+P+++ +I+L SS + + + R+V++ ID ++ L+SL ++ PD+Y+F P + +V I ++ L SI +V ++R++R Sbjct: 5 RPLLARGWIVASVLYGFVRILLVWRFLSDYGIDPFVFAAIELTSSALFGWASGRLVVAVIDRDRRSRGVMALVSLAGYLAPDVYVFASAGRFPDGLLATVVTIAVVSALLTSIGIVRSIRRLR 127
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Match: A0A7K1CQ61_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1CQ61_9ACTN) HSP 1 Score: 73.6 bits (179), Expect = 8.620e-14 Identity = 37/128 (28.91%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 40 RRRRILSRSWGAFVVAWSFVRALIVWAALGDYGINPWIYLSIDLASSIVDAFTTPRMVLSFIDDQYKTAAKWGLISLFVFIIPDLYIFLGTKTLPKRVIVVICLIILLTFSIAVVATVRKVREGRRLR 423 + RR++ R W V+ W + ++ L YG+NP+IY +I ++ SI A T RM+ +FI+ +K + +G + +PD+YIF+ K +P+ + + LI++L +++ V VR ++ Sbjct: 11 KHRRLIQRWWILIVILWDVSKTFVIDKTLAQYGVNPYIYFAITISISIPYALVTARMLFAFIEKHWKNSIVYGSAAAIFHFLPDVYIFVTAKEVPRTLYDGLILIVVLFTGLSIRGIVLHVRANHAVQ 138
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Match: A0A6J6CCT7_9ZZZZ (Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A6J6CCT7_9ZZZZ) HSP 1 Score: 63.5 bits (153), Expect = 9.630e-10 Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 1 Query: 61 RSWGAFVVAWSFVRALIVWAALGDYGINPWIYLSIDLASS----IVDAFTTPRMVLSFIDDQYKTAAKWGLISLFVFIIPDLYIFLGTKTLPKRVIVVICLIILLTFSIAVVATVRKVREGRRLRLAE 432 R+W +VA+S RAL+ W AL YG+NPW++L+IDL ++ I A T +L D + A W + + +F+ P +YIF + +P + ++L +AV+ T R+VRE + +E Sbjct: 21 RAWSVGIVAFSAARALLAWPALARYGVNPWLFLAIDLLTAPPYGISQAVTVK--ILRDPDRPPRDALGWCAMVVAMFLAPYVYIFAASGEMPALAYAGLAAWMVLFGVLAVLRTARQVREPNESQNSE 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10223.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10223.3.1 >prot_P-wetherbeei_contig10223.3.1 ID=prot_P-wetherbeei_contig10223.3.1|Name=mRNA_P-wetherbeei_contig10223.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp MPILVHHDAATLRRRRILSRSWGAFVVAWSFVRALIVWAALGDYGINPWIback to top mRNA from alignment at P-wetherbeei_contig10223:1591..2046- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10223.3.1 ID=mRNA_P-wetherbeei_contig10223.3.1|Name=mRNA_P-wetherbeei_contig10223.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig10223:1591..2046- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10223:1591..2046- >mRNA_P-wetherbeei_contig10223.3.1 ID=mRNA_P-wetherbeei_contig10223.3.1|Name=mRNA_P-wetherbeei_contig10223.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig10223:1591..2046- (Phaeothamnion wetherbeei SAG_119_79)back to top |