mRNA_P-wetherbeei_contig76.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Match: D7G362_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G362_ECTSI) HSP 1 Score: 209 bits (533), Expect = 1.930e-62 Identity = 127/247 (51.42%), Postives = 166/247 (67.21%), Query Frame = 2
Query: 212 RCLAGGSAFFACLVASQALQG-ALRISTGTPLGIPSLIGLATVCGASAAAVGVSEAAGSFL---TTGDARKVL----SLPQAQAAPENLEALAGVGAFGVAAFRALGGRFHSIAPSRLDSLGSFAHSPFSLRATLNYATAQEKVALSKLGEVFGCHSCGGRR-GPFHADHMPPVKVVAAANARLWRRMLRATVSQRFYPQCKACSELQSSAVRNASGAFVYHFR--ALRPYHATGALVVLATVLLAK 919
+ + GG AF A L SQALQG ALR+S +PLG+P+ +G ATV AS A+V V+E S L ++ D++++ S+ +A P N + G +FG+ FRALGGRF S+APS L G+F+ SL ATL YA+ ++ AL+ LG+ FGCH+CG R F ADHMPP+K V ANA+LWRR LR TVSQRFYPQC+ACS LQS+AVR+ YHF ALRPYHATG L+VL +++LA+
Sbjct: 51 QAVGGGGAFVAVLALSQALQGFALRVSCSSPLGLPTALGFATVAAASVASVRVAEGISSGLEAASSKDSQRISDPWRSMLEAAEQPANSGEI-GASSFGLVLFRALGGRFSSVAPSALHMPGAFSRLSASLPATLEYASDGKRQALATLGKNFGCHTCGTRAPATFIADHMPPLKTVKLANAKLWRRALRQTVSQRFYPQCQACSTLQSAAVRSGQTTLRYHFTLAALRPYHATGGLLVLGSLVLAQ 296
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Match: A0A835YVL4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL4_9STRA) HSP 1 Score: 193 bits (490), Expect = 7.570e-57 Identity = 117/239 (48.95%), Postives = 155/239 (64.85%), Query Frame = 2
Query: 257 SQALQGA-LRISTGTPLGIPSLIGLATVCGASAAAVGVSEAAGSFLTTGDAR-KVLSLPQAQAAPENLEALAGVGAFGVAAFRALGGRFHSIAPSRLDSLGSFAHSPFSLRATLNYATAQEKVALSKLGEVFGCHSCGGRRGP-FHADHMPPVKVVAAANARLWRRMLRATVSQRFYPQCKACSELQSSAVRNASGAFV--YHFRALRPYHATGALVVLATVLLAKHCDSQAKAVRKQK 958
SQA+QGA LR++ TPLGIP+ +G TV GAS A+ VSEA + LTTG+ + V S + + P EA A AFG+A F+ LGG F IAPS +D+LG+F+ SL ATL YAT +E+ ++ LGE +GCHSCG R G ++ADHMPP+K V ANARLWRR+ TV+QRFYPQCK CS++Q+ VR A G FV +H + YHATG L+V + L ++ + +K
Sbjct: 6 SQAVQGAVLRVAASTPLGIPNALGFVTVAGASLVALHVSEAVSTALTTGNLQLAVQSTIETASDPGPAEASAV--AFGLALFKCLGGTFGGIAPSLIDNLGAFSRFKASLPATLLYATTEERGVINALGETYGCHSCGRRAGAKYNADHMPPLKYVKKANARLWRRVTGLTVTQRFYPQCKPCSDIQAQVVR-ADGRFVKYHHPLTVHRYHATGLLLVAGVLCLREYARERTARAALRK 241
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Match: A0A1V9ZS53_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS53_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.740e-35 Identity = 86/243 (35.39%), Postives = 122/243 (50.21%), Query Frame = 2
Query: 170 RQIEVLGYCIEAGARCLAGGSAFFACLVASQALQGALRISTGTPLGIPSLIGLATVCGASAAAVGVSEAAGSFLTTGDARKVLSLPQAQAAPENLEALAGVGAFGVAAFRALGGRFHSIAPSRLDSLGSFAHSPFSLRATLNYATAQEKVALSKLGEVFGCHSCGGRRGPFHADHMPPVKVVAAANARLWRRMLRATVSQRFYPQCKACSELQSSAVRNASGAFVYHFRALRPYHATGALVVL 898
R ++G + GG+ F + A+Q L L +S P+ +PS++G V +SA A G+F G + L AA G+ FR LGGRF ++APS G+F H+ +L AT+ YA + + G ++GCH+CG R +HADHMPPV V A NARLW +M +V+QR+YPQC+ CS Q + V+ + H LR YH TG +VL
Sbjct: 25 RDHRLVGVLERTAIDAVGGGALFLGGVSATQVLMYVLGVSVSMPV-LPSVLGAVGVASSSACA-------GAFCFRGTGKDPTPLQLTAAATS-----------GLLLFRLLGGRFRALAPSDFRHPGAFGHTKITLPATIEYADGNARAVIQSFGRLYGCHTCGTRSSKYHADHMPPVLVAKAENARLWAKMF-GSVTQRYYPQCEQCSNTQGALVKKNAKQLKTHLLQLRSYHWTGFWMVL 247
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Match: W7TNU7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNU7_9STRA) HSP 1 Score: 132 bits (333), Expect = 8.070e-33 Identity = 97/277 (35.02%), Postives = 137/277 (49.46%), Query Frame = 2
Query: 152 WRSSEERQIEVLGYCIEAGARCLAGGSAFFACLVASQALQGALRISTGTPLGIPSLIGLATVCGASAAAVGVSEAAGSFLTTG----------------DARKVLSLP-------QAQAAPENLEALAGVGAFGVAAFRALGGRFHSIAPSRLDSLGSFAHSPFSLRATLNYATAQEKVALSKLGEVFGCHSCGGRR-GPFHADHMPPVKVVAAANARLWRRMLRATVSQRFYPQCKACSELQSSAVRNASGAFVYHFRALRPYHATGALVVLATVL 910
WR S+E ++ +R AGG F L ASQ LQG L + +L G+ +V S A ++ A + L+ D R +S A E L A G+ F+ LGGRF +APS + G+F + +L A L YA+ ++K L G V+GCH+CG R+ G + DHMPP KV + R WRR+L V QRF PQC+ CS +QS+AVR+ VYH+ +LR YHATGA++ + ++L
Sbjct: 9 WRFSQEDWLKA--------SRLTAGGVTFLLTLSASQFLQGRL-LGISAASRAATLAGMLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATGAVLEVVSLL 276
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Match: A0A067CVX6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVX6_SAPPC) HSP 1 Score: 133 bits (334), Expect = 9.270e-33 Identity = 90/241 (37.34%), Postives = 123/241 (51.04%), Query Frame = 2
Query: 179 EVLGYCIEAGARCLAGGSAFFACLVASQAL-QGALRISTGTPLGIPSLIGLATVCGASAAAVGVSEAAGSFLTTGDARKVLSLPQAQAAPENLEALAGVGAFGVAAFRALGGRFHSIAPSRLDSLGSFAHSPFSLRATLNYATAQEKVALSKLGEVFGCHSCGGRRGPFHADHMPPVKVVAAANARLWRRMLRATVSQRFYPQCKACSELQSSAVRNASGAFVYHFRALRPYHATGALVVL 898
+VL +E A GG A F V+ L LRIS P+ +PSL+G V +SA A G+F L P L+ L G+ FR LGGRF ++APS G+F H+ SL AT+ YA + + G ++GCH+CG +R +HADHMPPV V A NAR+W ++ V+QR+YPQC++CS Q + V+ + H LR YH TG +VL
Sbjct: 26 QVLVSALERTAIDAVGGGALFLGGVSLTHLGMYVLRISVAMPV-LPSLLGGLGVASSSAMA-------GAFC----------LRHGSTEPTPLQ-LTAAATSGLLLFRLLGGRFRALAPSDFRHPGAFGHARISLPATIEYADGNARAVIQSFGRLYGCHTCGTKRSKYHADHMPPVLVAKAENARVWAKLF-GPVTQRYYPQCESCSNTQGALVKKNAKQLKLHLTELRAYHWTGFWMVL 246
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Match: A0A7S4IEL5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IEL5_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.180e-30 Identity = 102/237 (43.04%), Postives = 129/237 (54.43%), Query Frame = 2
Query: 218 LAGGSAFFACLVASQALQ-GALRISTGTPLGIPSLIGLATVCGASA----AAVGVSEAAG-SFLTTGDAR--KVLSLPQAQAA--------PENLEALAGVGAFGVAAFRALGGRFHSIAPSRLDSLGSFAHSPFSLRATLNYATAQEKVALSKLGEVFGCHSCGGR----RGP------FHADHMPPVKVVAAANARLWRRMLRATVSQRFYPQCKACSELQSSAVRNASGAFVYH 850
L+G AF + L AS Q L ISTG+ +P+L+GL +V AS AAVG +A ++ GD R K S A+A+ P L V AFG+ AF+ LGGRF SI+PS LGSFA + SL AT+ Y TA+E+ A+ +LG FGCH+CG R R P FHADHMPP V N R +R+ L TV QRFYPQC +CS Q + +AS H
Sbjct: 73 LSGTVAFASALAASTFAQLRILGISTGSIPPVPTLLGLGSVGAASVLSQWAAVGTYDALRRGWVGNGDRRTGKRWSGSSAEASNHSHLGCNPHTLR----VCAFGLVAFKLLGGRFWSISPSSYTHLGSFARA--SLPATMKYGTAKERAAIERLGRSFGCHTCGSRMIFSRLPGSSAVRFHADHMPPKAVAEQMNRRWYRQALGQTVRQRFYPQCVSCSNEQGGILSSASNELRKH 303
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Match: A0A6A3MHG9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MHG9_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.600e-28 Identity = 90/280 (32.14%), Postives = 134/280 (47.86%), Query Frame = 2
Query: 161 SEERQIEVLGYCIEAGARCLAGGSAFFACLVASQALQGALRISTGTPLGIPSLIGLATVCGASAAAVGVSEA------------------------AGSFLTTGDARKVL---------SLPQAQAAPENLEALAGVGAFGVAAFRALGGRFHSIAPSRLDSLGSFAHSPFSLRATLNYATAQEKVALSKLGEVFGCHSCGGRRGP-FHADHMPPVKVVAAANARLWRRMLRATVSQRFYPQCKACSELQSSAVRNASGAFVYHFRALRPYHATGALVVL 898
+ ER + + GG F + A+Q Q LR+ + + +P +G+A V +S AA+ ++ A +G L A ++L LPQA P + A A G+ F+ LGGR +++APS LG+F SL AT YAT E+ + + G ++GCH+CG +RG +HADHMPP V + + +R++L T + RFYPQC++CS QSS V+ H +LR YHATG +VL
Sbjct: 19 ASERSVSLYEALTAHALDAATGGVLFLGGVSAAQVAQKLLRVGSASGFLLPQALGVAAVGASSVAALHLASAPREVFQELAAQQKXXXXXXXXXXXSGRDLQPPTAWRLLRSKARERWEDLPQA---PYPVYA-----AMGLLCFKLLGGRPNALAPSPFADLGAFHLKKASLPATAEYATGVERGVIQQFGRLYGCHTCGVKRGVRYHADHMPPKLVAKRRDEQFFRKLLGRTTAFRFYPQCESCSNQQSSVVKQWKSTLKMHLLSLRAYHATGLWLVL 290
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Match: A0A7S2R906_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R906_9STRA) HSP 1 Score: 119 bits (297), Expect = 4.480e-28 Identity = 90/229 (39.30%), Postives = 115/229 (50.22%), Query Frame = 2
Query: 206 GARCLAGGSAFFACLVASQALQGALRISTGTPLGIPS------LIGLATVCGASAAAVGVS-EAAGSFLTTGDARKVLSLPQAQAAPENLEALAGVGAF-------------GVAAFRALGGRFHSIAPSRLDSLGSFAH-SPFSLRATLNYATAQEKVALSKLGEVFGCHSCGG--RRGPFHADHMPPVKVVAAANARLWRRMLRATVSQRFYPQCKACSELQSSAVR 823
G C+A G +F + QA Q LR++T +PL S L GLAT S+ GV+ A +F G + + P + + +GA GV F +LGG S +PS LG+FA SL ATL+YAT +E+ ++ LG GCHSCG R G F ADH PPVK A N LWRR+ VSQRFYPQC+ACS +QS VR
Sbjct: 26 GKACVAAGVSFLGAVNIGQAAQATLRVNTASPLLASSCSLVTLLAGLATSTYVSSELAGVNTRAQQAFRGVGKSFAAAVHSTGLSVP-SFRGMGSLGAIWDSHHQTIVASLCGVLLFYSLGGAPTSFSPSDARHLGAFARPKQGSLGATLSYATEKERSLINALGRKLGCHSCGKQHRVGSFIADHQPPVKFTKARNTALWRRITGLKVSQRFYPQCQACSSIQSRVVR 253
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Match: D0NUV7_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NUV7_PHYIT) HSP 1 Score: 119 bits (297), Expect = 2.120e-27 Identity = 61/142 (42.96%), Postives = 85/142 (59.86%), Query Frame = 2
Query: 476 AFGVAAFRALGGRFHSIAPSRLDSLGSFAHSPFSLRATLNYATAQEKVALSKLGEVFGCHSCGGRRGP-FHADHMPPVKVVAAANARLWRRMLRATVSQRFYPQCKACSELQSSAVRNASGAFVYHFRALRPYHATGALVVL 898
A G+ F+ LGGR S+APS +LG+F SL AT+ YAT+ E+ + + G +FGCH+CG +RG +HADHMPP V + +L RR+L + RFYPQC+ CS Q + V+ H + R YHATG ++L
Sbjct: 146 AMGLLCFKLLGGRMSSLAPSPFANLGAFHLKKASLPATIEYATSVERGIIREFGRLFGCHTCGVKRGVRYHADHMPPKLVAKHTDEQLVRRLLGRKTTFRFYPQCEPCSNQQGTVVKQWKSTLKLHLVSFRAYHATGMWLIL 287
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Match: A0A484EB96_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EB96_BRELC) HSP 1 Score: 118 bits (295), Expect = 8.580e-27 Identity = 57/140 (40.71%), Postives = 85/140 (60.71%), Query Frame = 2
Query: 482 GVAAFRALGGRFHSIAPSRLDSLGSFAHSPFSLRATLNYATAQEKVALSKLGEVFGCHSCGGRRGP-FHADHMPPVKVVAAANARLWRRMLRATVSQRFYPQCKACSELQSSAVRNASGAFVYHFRALRPYHATGALVVL 898
G+ F+ LGGR ++APS L +LG+F SL AT+ YAT+ E+ + + G ++GCH+CG +RG +HADHMPP + + +A+ R RFYPQC++CS LQ + V++ H + R YHATG ++L
Sbjct: 148 GLLCFKLLGGRMSALAPSPLANLGAFHLRKASLPATIEYATSVERGIIQEFGRLYGCHTCGAKRGVRYHADHMPPKLMASRTDAQFLRNFFGRKTKFRFYPQCESCSNLQGNVVKHWKSTLKMHLLSFRAYHATGLWLIL 287 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig76.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig76.6.1 >prot_P-wetherbeei_contig76.6.1 ID=prot_P-wetherbeei_contig76.6.1|Name=mRNA_P-wetherbeei_contig76.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp MPGRWRSSEERQIEVLGYCIEAGARCLAGGSAFFACLVASQALQGALRISback to top mRNA from alignment at P-wetherbeei_contig76:5599..6813+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig76.6.1 ID=mRNA_P-wetherbeei_contig76.6.1|Name=mRNA_P-wetherbeei_contig76.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1215bp|location=Sequence derived from alignment at P-wetherbeei_contig76:5599..6813+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig76:5599..6813+ >mRNA_P-wetherbeei_contig76.6.1 ID=mRNA_P-wetherbeei_contig76.6.1|Name=mRNA_P-wetherbeei_contig76.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig76:5599..6813+ (Phaeothamnion wetherbeei SAG_119_79)back to top |