mRNA_P-wetherbeei_contig7483.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A6H5KI42_9PHAE (SP-RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI42_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.540e-61 Identity = 114/230 (49.57%), Postives = 150/230 (65.22%), Query Frame = 1
Query: 1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRDTVEEGRERVRRSFPA--------------------GSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSER-SSAAWRCGVCHLLILPADMVVDAFLMDVVRTLGER--VADVEEVEIFPDGRWE 621
WP E+V VNG + QLKQR++F QG RKLKGDC P+DI CR G+N++D+ +D D + +++Q+V+ VGVEEV+ + R + +E RV+RSF G+ DSDD+L AT+TRLSLRCPLGLVPI P RGR C HLQCFDL+TFL F++ + AAW+CGVC+L I P D+VVD +L +VVR+L E+ D EEVEI DG W+
Sbjct: 237 WPLESVCQVNGGFQQLKQRKVFFQGQNRKLKGDCSPLDIGASCRPGENRVDLYSSDPDE-HAVLIQVVRLVGVEEVLKNVKQRSHLSKKEALRRVKRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCKHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWD 465
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: D8LQR5_ECTSI (Similar to retinoic acid induced 17, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR5_ECTSI) HSP 1 Score: 197 bits (500), Expect = 3.190e-55 Identity = 104/210 (49.52%), Postives = 138/210 (65.71%), Query Frame = 1
Query: 1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRDTVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSER-SSAAWRCGVCHLLILPADMVVDAFLMDVVRTLGER--VADVEEVEIFPDGRWE 621
WP E+V VNG + QLKQR++F QG RKLKGDC P+DI CR G+N++++ +D D V++ + ++ V + G + + E + AG DD SDD+L AT+TRLSLRCPLGLVPI P RGR C HLQCFDL+TFL F++ + AAW+CGVC+L I P D+VVD +L +VVR+L E+ D EEVEI DG W+
Sbjct: 210 WPLESVCQVNGGFQQLKQRKVFFQGQNRKLKGDCSPLDIGASCRPGENRVELYSSDPDKHAVLIQEALRRV--KRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDD--SDDDLMATATRLSLRCPLGLVPITCPGRGRYCKHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWD 415
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: W7TGK7_9STRA (Sumo ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGK7_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.110e-49 Identity = 95/213 (44.60%), Postives = 137/213 (64.32%), Query Frame = 1
Query: 1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARP-RDTVEEGRERVRRSFPAGSDDSDSDD-ELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERSSAA-WRCGVCHLLILPADMVVDAFLMDVVRTLGERVA---DVEEVEIFPDGRWE 621
WP E+ + VN +KQR+ + G RK KG +PVD+ + R G N++ + D G+V+++Q+V+ VGV+ ++ +V P T EE ER+R+SF S DSD++D EL AT TRLSLRCPLG+ PIR+PARG C HLQCFDL TFL ++ER +AA WRCGVC+ ++ + VDAF+ +++ + R D++ +EI G WE
Sbjct: 325 WPLESQLRVNTECVPIKQRQTYFYGSQRKSKGHSEPVDVFLLARTGINRVGLMHNDEGKGFVIMVQIVKVVGVQRLLRKVVESPDTPTAEESLERIRQSFRGCSVDSDTEDGELMATVTRLSLRCPLGMTPIRIPARGTDCHHLQCFDLDTFLRYNERGAAAGWRCGVCNTVLTLEGLRVDAFMRNILAQIEARKEMNEDLDSIEINHQGEWE 537
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A485LNC0_9STRA (Aste57867_23638 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNC0_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.280e-37 Identity = 86/209 (41.15%), Postives = 127/209 (60.77%), Query Frame = 1
Query: 1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPG-YVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRW 618
WP V+VNG Q+ QR + Q K+ + P+++ Q R G+N I++ ADT P YV ++Q V+ +E ++D ++A T ++ + V +SF G +D DD++ AT T LSLRCPLGL I +PARG C HLQCFDL TFL+F+ + S AW+C VCH I A++ +D +L ++R + + ++EEVEIFPD W
Sbjct: 275 WPTCCTVNVNGNPAQVIQRAVPGQTNTSKVLRE-QPLNLLQFSRPGRNLIEIRTADTLPMLYVFLIQRVERQALETLVDVVIANSTPITYDQAKADVIKSF--GDED---DDDIVATCTMLSLRCPLGLCVIELPARGIHCKHLQCFDLKTFLMFNRSARSRAWKCIVCHKFIALAELRIDPYLKKLLRDVADD-DELEEVEIFPDASW 476
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A7S1Y0V2_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0V2_9STRA) HSP 1 Score: 145 bits (366), Expect = 9.360e-37 Identity = 81/209 (38.76%), Postives = 118/209 (56.46%), Query Frame = 1
Query: 1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCA-DTDPGYVMVLQMVQNVGVEEVMDGIVARPRDTVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERSSA-AWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRWE 621
WP T + VNG LKQR+ K KG +P DI +CRAG+N I+VS D D Y +V+Q+ +G +++ + AR ++ G ER SF +D E+ T T LSL+CPL L I VP RGRRC HLQCFDL +++ +++ S WRCGVC+ ++ PAD++ D ++ D++R D++ I DG W+
Sbjct: 353 WPKATKLLVNGQHAYLKQRKF--NSFDNKWKGFSEPADITLLCRAGKNTIEVSTTEDLDEKYGLVVQIANLLGDADIVAAVAARESPSIASGYERALNSFREDADGI----EIVITHTNLSLKCPLSLAKITVPGRGRRCTHLQCFDLLSYVGMNKKGSVNRWRCGVCNSVLRPADLIRDQWMEDMIRRAPFGTVDIK---INQDGTWQ 552
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A2P4X7F3_9STRA (SUMO ligase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7F3_9STRA) HSP 1 Score: 141 bits (356), Expect = 5.640e-36 Identity = 79/208 (37.98%), Postives = 124/208 (59.62%), Query Frame = 1
Query: 1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRW 618
WPA T + VNG + QR K+ + P ++ Q R G+N +D+ + + ++Q+V+ + +++D + ++ T E ++ V +SF GS+D +D++ AT T LS+RCPLGL I +PARG C HLQCFDL TF++FS+++ S AWRC VCH I +D+ +D +L ++ + E ++EEVEIFPDG W
Sbjct: 89 WPASTQLSVNGFGVPITQRAPPGHANPSKVLREL-PANVFQYSRIGRNVVDIRTTENPSVFGFMVQIVEVRNINDLVDEVKEASKNLTYESAKQEVIKSF--GSED---EDDVVATVTMLSVRCPLGLCVINLPARGLHCKHLQCFDLKTFMLFSKKARSKAWRCTVCHQFIKASDLRIDPYLKKLLAEV-EGEDELEEVEIFPDGSW 289
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A3M6VVF6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVF6_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.920e-35 Identity = 81/208 (38.94%), Postives = 124/208 (59.62%), Query Frame = 1
Query: 1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRW 618
WPA T + VNG + QR K+ + P +I Q RAG+N +D+ + + ++Q+V+ + ++++ + + T + ++ V +SF GS+D +D++ AT T LS+RCPLGL I +PARG C HLQCFDL TFL+FS+++ S AWRC VCH I AD+ +D +L ++ + E ++EEVEIFPDG W
Sbjct: 289 WPASTQLSVNGFGVPITQRAPPGHANPSKVLREL-PANIFQYSRAGRNVVDIRSVENPSVFGFMIQIVEVCNINDLVNEVKEASKHLTYDIAKQEVIKSF--GSED---EDDVVATVTMLSVRCPLGLCVINLPARGLHCKHLQCFDLRTFLLFSKKARSKAWRCTVCHQFIKAADLRIDPYLKKLLTEV-EGEDELEEVEIFPDGSW 489
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A3R7AMH3_9STRA (SP-RING-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AMH3_9STRA) HSP 1 Score: 139 bits (350), Expect = 3.480e-35 Identity = 84/209 (40.19%), Postives = 121/209 (57.89%), Query Frame = 1
Query: 1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPG-YVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRW 618
WP + VNG L QR + Q K+ + P+++ M R G N ID+ AD+ P YV V+Q V+ ++ ++ +VA+ T + + V +SF G DD DD++ AT T LS+RCPLGL I +PARG C HLQCFDL TFL+F+ + S AW+C VCH I D+ +D +L ++ + + ++EEVEIFPD W
Sbjct: 48 WPTCCTILVNGYACALVQRAVPGQTNTSKVLRE-QPLNLLPMSRHGTNTIDIRTADSLPNLYVFVIQRVEKQDLDHLLQHVVAQSEPITYAQAKADVIKSF--GGDD---DDDIVATCTMLSVRCPLGLCVIDLPARGIHCQHLQCFDLKTFLLFNRTARSRAWKCIVCHKFIALDDLRIDPYLKQLLADVRDD-EELEEVEIFPDATW 249
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A0P1A536_PLAHL (Sumo ligase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A536_PLAHL) HSP 1 Score: 140 bits (353), Expect = 5.540e-35 Identity = 82/209 (39.23%), Postives = 125/209 (59.81%), Query Frame = 1
Query: 1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDV-VRTLGERVADVEEVEIFPDGRW 618
WPA T ++VNG + QR K+ + P +I Q R G+N ID+ + + +++Q+V+ + ++++ + ++ T E +E V +SF GS+D +D++ AT T LS+RCPLGL I +PARG C HLQCFDL TF++F +++ S AWRC VCH I +D+ +D +L + + GE D+EEVEIFPDG W
Sbjct: 291 WPASTQLNVNGFGVPITQRAPPGHANPSKVLREI-PANIFQYSRVGRNVIDIRTVENPSVFGIMVQIVEVRDINDLVNEVKEASKNVTYESAKEVVIKSF--GSED---EDDVVATVTMLSVRCPLGLCVIDLPARGIHCKHLQCFDLKTFILFCKKARSKAWRCTVCHQFIKASDLRIDPYLKKLLIEVQGEE--DLEEVEIFPDGSW 491
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A3L6V507_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V507_9STRA) HSP 1 Score: 139 bits (350), Expect = 7.420e-35 Identity = 84/209 (40.19%), Postives = 121/209 (57.89%), Query Frame = 1
Query: 1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPG-YVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRW 618
WP + VNG L QR + Q K+ + P+++ M R G N ID+ AD+ P YV V+Q V+ ++ ++ +VA+ T + + V +SF G DD DD++ AT T LS+RCPLGL I +PARG C HLQCFDL TFL+F+ + S AW+C VCH I D+ +D +L ++ + + ++EEVEIFPD W
Sbjct: 286 WPTCCTILVNGYACALVQRAVPGQTNTSKVLRE-QPLNLLPMSRHGTNTIDIRTADSLPNLYVFVIQRVEKQDLDHLLQHVVAQSEPITYAQAKADVIKSF--GGDD---DDDIVATCTMLSVRCPLGLCVIDLPARGIHCQHLQCFDLKTFLLFNRTARSRAWKCIVCHKFIALDDLRIDPYLKQLLADVRDD-EELEEVEIFPDATW 487 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7483.1.1 >prot_P-wetherbeei_contig7483.1.1 ID=prot_P-wetherbeei_contig7483.1.1|Name=mRNA_P-wetherbeei_contig7483.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=207bp WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIback to top mRNA from alignment at P-wetherbeei_contig7483:272..2149- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7483.1.1 ID=mRNA_P-wetherbeei_contig7483.1.1|Name=mRNA_P-wetherbeei_contig7483.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1878bp|location=Sequence derived from alignment at P-wetherbeei_contig7483:272..2149- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7483:272..2149- >mRNA_P-wetherbeei_contig7483.1.1 ID=mRNA_P-wetherbeei_contig7483.1.1|Name=mRNA_P-wetherbeei_contig7483.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig7483:272..2149- (Phaeothamnion wetherbeei SAG_119_79)back to top |