mRNA_P-wetherbeei_contig7483.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7483.1.1
Unique NamemRNA_P-wetherbeei_contig7483.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A6H5KI42_9PHAE (SP-RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI42_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 2.540e-61
Identity = 114/230 (49.57%), Postives = 150/230 (65.22%), Query Frame = 1
Query:    1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRDTVEEGRERVRRSFPA--------------------GSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSER-SSAAWRCGVCHLLILPADMVVDAFLMDVVRTLGER--VADVEEVEIFPDGRWE 621
            WP E+V  VNG + QLKQR++F QG  RKLKGDC P+DI   CR G+N++D+  +D D  + +++Q+V+ VGVEEV+  +  R   + +E   RV+RSF                      G+   DSDD+L AT+TRLSLRCPLGLVPI  P RGR C HLQCFDL+TFL F++  + AAW+CGVC+L I P D+VVD +L +VVR+L E+    D EEVEI  DG W+
Sbjct:  237 WPLESVCQVNGGFQQLKQRKVFFQGQNRKLKGDCSPLDIGASCRPGENRVDLYSSDPDE-HAVLIQVVRLVGVEEVLKNVKQRSHLSKKEALRRVKRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCKHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWD 465          
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: D8LQR5_ECTSI (Similar to retinoic acid induced 17, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR5_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 3.190e-55
Identity = 104/210 (49.52%), Postives = 138/210 (65.71%), Query Frame = 1
Query:    1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRDTVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSER-SSAAWRCGVCHLLILPADMVVDAFLMDVVRTLGER--VADVEEVEIFPDGRWE 621
            WP E+V  VNG + QLKQR++F QG  RKLKGDC P+DI   CR G+N++++  +D D   V++ + ++ V  +    G +        +  E  +    AG DD  SDD+L AT+TRLSLRCPLGLVPI  P RGR C HLQCFDL+TFL F++  + AAW+CGVC+L I P D+VVD +L +VVR+L E+    D EEVEI  DG W+
Sbjct:  210 WPLESVCQVNGGFQQLKQRKVFFQGQNRKLKGDCSPLDIGASCRPGENRVELYSSDPDKHAVLIQEALRRV--KRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDD--SDDDLMATATRLSLRCPLGLVPITCPGRGRYCKHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWD 415          
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: W7TGK7_9STRA (Sumo ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGK7_9STRA)

HSP 1 Score: 180 bits (457), Expect = 2.110e-49
Identity = 95/213 (44.60%), Postives = 137/213 (64.32%), Query Frame = 1
Query:    1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARP-RDTVEEGRERVRRSFPAGSDDSDSDD-ELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERSSAA-WRCGVCHLLILPADMVVDAFLMDVVRTLGERVA---DVEEVEIFPDGRWE 621
            WP E+ + VN     +KQR+ +  G  RK KG  +PVD+  + R G N++ +   D   G+V+++Q+V+ VGV+ ++  +V  P   T EE  ER+R+SF   S DSD++D EL AT TRLSLRCPLG+ PIR+PARG  C HLQCFDL TFL ++ER +AA WRCGVC+ ++    + VDAF+ +++  +  R     D++ +EI   G WE
Sbjct:  325 WPLESQLRVNTECVPIKQRQTYFYGSQRKSKGHSEPVDVFLLARTGINRVGLMHNDEGKGFVIMVQIVKVVGVQRLLRKVVESPDTPTAEESLERIRQSFRGCSVDSDTEDGELMATVTRLSLRCPLGMTPIRIPARGTDCHHLQCFDLDTFLRYNERGAAAGWRCGVCNTVLTLEGLRVDAFMRNILAQIEARKEMNEDLDSIEINHQGEWE 537          
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A485LNC0_9STRA (Aste57867_23638 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNC0_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.280e-37
Identity = 86/209 (41.15%), Postives = 127/209 (60.77%), Query Frame = 1
Query:    1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPG-YVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRW 618
            WP    V+VNG   Q+ QR +  Q    K+  +  P+++ Q  R G+N I++  ADT P  YV ++Q V+   +E ++D ++A     T ++ +  V +SF  G +D   DD++ AT T LSLRCPLGL  I +PARG  C HLQCFDL TFL+F+  + S AW+C VCH  I  A++ +D +L  ++R + +   ++EEVEIFPD  W
Sbjct:  275 WPTCCTVNVNGNPAQVIQRAVPGQTNTSKVLRE-QPLNLLQFSRPGRNLIEIRTADTLPMLYVFLIQRVERQALETLVDVVIANSTPITYDQAKADVIKSF--GDED---DDDIVATCTMLSLRCPLGLCVIELPARGIHCKHLQCFDLKTFLMFNRSARSRAWKCIVCHKFIALAELRIDPYLKKLLRDVADD-DELEEVEIFPDASW 476          
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A7S1Y0V2_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0V2_9STRA)

HSP 1 Score: 145 bits (366), Expect = 9.360e-37
Identity = 81/209 (38.76%), Postives = 118/209 (56.46%), Query Frame = 1
Query:    1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCA-DTDPGYVMVLQMVQNVGVEEVMDGIVARPRDTVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERSSA-AWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRWE 621
            WP  T + VNG    LKQR+        K KG  +P DI  +CRAG+N I+VS   D D  Y +V+Q+   +G  +++  + AR   ++  G ER   SF   +D      E+  T T LSL+CPL L  I VP RGRRC HLQCFDL +++  +++ S   WRCGVC+ ++ PAD++ D ++ D++R       D++   I  DG W+
Sbjct:  353 WPKATKLLVNGQHAYLKQRKF--NSFDNKWKGFSEPADITLLCRAGKNTIEVSTTEDLDEKYGLVVQIANLLGDADIVAAVAARESPSIASGYERALNSFREDADGI----EIVITHTNLSLKCPLSLAKITVPGRGRRCTHLQCFDLLSYVGMNKKGSVNRWRCGVCNSVLRPADLIRDQWMEDMIRRAPFGTVDIK---INQDGTWQ 552          
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A2P4X7F3_9STRA (SUMO ligase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7F3_9STRA)

HSP 1 Score: 141 bits (356), Expect = 5.640e-36
Identity = 79/208 (37.98%), Postives = 124/208 (59.62%), Query Frame = 1
Query:    1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRW 618
            WPA T + VNG    + QR         K+  +  P ++ Q  R G+N +D+   +    +  ++Q+V+   + +++D +    ++ T E  ++ V +SF  GS+D   +D++ AT T LS+RCPLGL  I +PARG  C HLQCFDL TF++FS+++ S AWRC VCH  I  +D+ +D +L  ++  + E   ++EEVEIFPDG W
Sbjct:   89 WPASTQLSVNGFGVPITQRAPPGHANPSKVLREL-PANVFQYSRIGRNVVDIRTTENPSVFGFMVQIVEVRNINDLVDEVKEASKNLTYESAKQEVIKSF--GSED---EDDVVATVTMLSVRCPLGLCVINLPARGLHCKHLQCFDLKTFMLFSKKARSKAWRCTVCHQFIKASDLRIDPYLKKLLAEV-EGEDELEEVEIFPDGSW 289          
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A3M6VVF6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVF6_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.920e-35
Identity = 81/208 (38.94%), Postives = 124/208 (59.62%), Query Frame = 1
Query:    1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRW 618
            WPA T + VNG    + QR         K+  +  P +I Q  RAG+N +D+   +    +  ++Q+V+   + ++++ +    +  T +  ++ V +SF  GS+D   +D++ AT T LS+RCPLGL  I +PARG  C HLQCFDL TFL+FS+++ S AWRC VCH  I  AD+ +D +L  ++  + E   ++EEVEIFPDG W
Sbjct:  289 WPASTQLSVNGFGVPITQRAPPGHANPSKVLREL-PANIFQYSRAGRNVVDIRSVENPSVFGFMIQIVEVCNINDLVNEVKEASKHLTYDIAKQEVIKSF--GSED---EDDVVATVTMLSVRCPLGLCVINLPARGLHCKHLQCFDLRTFLLFSKKARSKAWRCTVCHQFIKAADLRIDPYLKKLLTEV-EGEDELEEVEIFPDGSW 489          
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A3R7AMH3_9STRA (SP-RING-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AMH3_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.480e-35
Identity = 84/209 (40.19%), Postives = 121/209 (57.89%), Query Frame = 1
Query:    1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPG-YVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRW 618
            WP    + VNG    L QR +  Q    K+  +  P+++  M R G N ID+  AD+ P  YV V+Q V+   ++ ++  +VA+    T  + +  V +SF  G DD   DD++ AT T LS+RCPLGL  I +PARG  C HLQCFDL TFL+F+  + S AW+C VCH  I   D+ +D +L  ++  + +   ++EEVEIFPD  W
Sbjct:   48 WPTCCTILVNGYACALVQRAVPGQTNTSKVLRE-QPLNLLPMSRHGTNTIDIRTADSLPNLYVFVIQRVEKQDLDHLLQHVVAQSEPITYAQAKADVIKSF--GGDD---DDDIVATCTMLSVRCPLGLCVIDLPARGIHCQHLQCFDLKTFLLFNRTARSRAWKCIVCHKFIALDDLRIDPYLKQLLADVRDD-EELEEVEIFPDATW 249          
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A0P1A536_PLAHL (Sumo ligase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A536_PLAHL)

HSP 1 Score: 140 bits (353), Expect = 5.540e-35
Identity = 82/209 (39.23%), Postives = 125/209 (59.81%), Query Frame = 1
Query:    1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDV-VRTLGERVADVEEVEIFPDGRW 618
            WPA T ++VNG    + QR         K+  +  P +I Q  R G+N ID+   +    + +++Q+V+   + ++++ +    ++ T E  +E V +SF  GS+D   +D++ AT T LS+RCPLGL  I +PARG  C HLQCFDL TF++F +++ S AWRC VCH  I  +D+ +D +L  + +   GE   D+EEVEIFPDG W
Sbjct:  291 WPASTQLNVNGFGVPITQRAPPGHANPSKVLREI-PANIFQYSRVGRNVIDIRTVENPSVFGIMVQIVEVRDINDLVNEVKEASKNVTYESAKEVVIKSF--GSED---EDDVVATVTMLSVRCPLGLCVIDLPARGIHCKHLQCFDLKTFILFCKKARSKAWRCTVCHQFIKASDLRIDPYLKKLLIEVQGEE--DLEEVEIFPDGSW 491          
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Match: A0A3L6V507_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V507_9STRA)

HSP 1 Score: 139 bits (350), Expect = 7.420e-35
Identity = 84/209 (40.19%), Postives = 121/209 (57.89%), Query Frame = 1
Query:    1 WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKIDVSCADTDPG-YVMVLQMVQNVGVEEVMDGIVARPRD-TVEEGRERVRRSFPAGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTFLIFSERS-SAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEIFPDGRW 618
            WP    + VNG    L QR +  Q    K+  +  P+++  M R G N ID+  AD+ P  YV V+Q V+   ++ ++  +VA+    T  + +  V +SF  G DD   DD++ AT T LS+RCPLGL  I +PARG  C HLQCFDL TFL+F+  + S AW+C VCH  I   D+ +D +L  ++  + +   ++EEVEIFPD  W
Sbjct:  286 WPTCCTILVNGYACALVQRAVPGQTNTSKVLRE-QPLNLLPMSRHGTNTIDIRTADSLPNLYVFVIQRVEKQDLDHLLQHVVAQSEPITYAQAKADVIKSF--GGDD---DDDIVATCTMLSVRCPLGLCVIDLPARGIHCQHLQCFDLKTFLLFNRTARSRAWKCIVCHKFIALDDLRIDPYLKQLLADVRDD-EELEEVEIFPDATW 487          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7483.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI42_9PHAE2.540e-6149.57SP-RING-type domain-containing protein n=1 Tax=Ect... [more]
D8LQR5_ECTSI3.190e-5549.52Similar to retinoic acid induced 17, partial n=1 T... [more]
W7TGK7_9STRA2.110e-4944.60Sumo ligase n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A485LNC0_9STRA5.280e-3741.15Aste57867_23638 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S1Y0V2_9STRA9.360e-3738.76Hypothetical protein (Fragment) n=4 Tax=Phaeomonas... [more]
A0A2P4X7F3_9STRA5.640e-3637.98SUMO ligase n=1 Tax=Phytophthora palmivora var. pa... [more]
A0A3M6VVF6_9STRA2.920e-3538.94Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A3R7AMH3_9STRA3.480e-3540.19SP-RING-type domain-containing protein (Fragment) ... [more]
A0A0P1A536_PLAHL5.540e-3539.23Sumo ligase n=1 Tax=Plasmopara halstedii TaxID=478... [more]
A0A3L6V507_9STRA7.420e-3540.19Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7483contigP-wetherbeei_contig7483:272..2149 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LQR5
Preferred nameSIZ1
PFAMsPHD,SAP,zf-MIZ
Model size621
Max annot lvl2759|Eukaryota
KEGG koko:K04706,ko:K10706,ko:K16063,ko:K22403
KEGG Pathwayko04120,ko04630,ko05160,map04120,map04630,map05160
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000902,GO:0001101,GO:0002682,GO:0002683,GO:0002831,GO:0002832,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006807,GO:0006935,GO:0006950,GO:0007154,GO:0007275,GO:0008150,GO:0008152,GO:0009266,GO:0009267,GO:0009408,GO:0009409,GO:0009414,GO:0009415,GO:0009553,GO:0009593,GO:0009605,GO:0009628,GO:0009653,GO:0009787,GO:0009791,GO:0009826,GO:0009856,GO:0009908,GO:0009909,GO:0009910,GO:0009966,GO:0009987,GO:0009991,GO:0010035,GO:0010112,GO:0010113,GO:0010183,GO:0010247,GO:0010286,GO:0010337,GO:0010565,GO:0010646,GO:0010817,GO:0016036,GO:0016043,GO:0016049,GO:0016740,GO:0016925,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019787,GO:0019789,GO:0022414,GO:0023051,GO:0031323,GO:0031347,GO:0031348,GO:0031667,GO:0031668,GO:0031669,GO:0032101,GO:0032102,GO:0032350,GO:0032446,GO:0032501,GO:0032502,GO:0032989,GO:0033554,GO:0035670,GO:0036211,GO:0040007,GO:0040008,GO:0040011,GO:0042221,GO:0042330,GO:0042594,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043901,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0044706,GO:0045088,GO:0045824,GO:0048229,GO:0048367,GO:0048437,GO:0048438,GO:0048440,GO:0048467,GO:0048481,GO:0048519,GO:0048580,GO:0048581,GO:0048583,GO:0048585,GO:0048589,GO:0048608,GO:0048731,GO:0048827,GO:0048831,GO:0048856,GO:0048868,GO:0048869,GO:0050776,GO:0050777,GO:0050789,GO:0050793,GO:0050794,GO:0050826,GO:0050896,GO:0050918,GO:0051093,GO:0051171,GO:0051239,GO:0051241,GO:0051301,GO:0051606,GO:0051704,GO:0051716,GO:0060560,GO:0061458,GO:0061659,GO:0061665,GO:0062012,GO:0065007,GO:0065008,GO:0070647,GO:0071496,GO:0071704,GO:0071840,GO:0080134,GO:0090352,GO:0090567,GO:0099402,GO:0140096,GO:1901419,GO:1901564,GO:1901700,GO:1903314,GO:1905957,GO:2000026,GO:2000070,GO:2000241,GO:2000242
Exons5
Evalue5.23e-56
EggNOG OGsKOG2169@1|root,KOG2169@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, MIZ-type
Ec32 orthologEc-24_002000.1
DescriptionSUMO transferase activity
Cds size621
COG categoryS
BRITEko00000,ko00001,ko01000,ko03021,ko04121,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186983.8926175-CDS-P-wetherbeei_contig7483:271..3671683186983.8926175-CDS-P-wetherbeei_contig7483:271..367Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7483 272..367 -
1683186983.9114249-CDS-P-wetherbeei_contig7483:735..9621683186983.9114249-CDS-P-wetherbeei_contig7483:735..962Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7483 736..962 -
1683186983.921754-CDS-P-wetherbeei_contig7483:1082..11821683186983.921754-CDS-P-wetherbeei_contig7483:1082..1182Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7483 1083..1182 -
1683186983.9318275-CDS-P-wetherbeei_contig7483:1496..16221683186983.9318275-CDS-P-wetherbeei_contig7483:1496..1622Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7483 1497..1622 -
1683186983.9419255-CDS-P-wetherbeei_contig7483:2077..21491683186983.9419255-CDS-P-wetherbeei_contig7483:2077..2149Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7483 2078..2149 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7483.1.1prot_P-wetherbeei_contig7483.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7483 272..2149 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7483.1.1

>prot_P-wetherbeei_contig7483.1.1 ID=prot_P-wetherbeei_contig7483.1.1|Name=mRNA_P-wetherbeei_contig7483.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=207bp
WPAETVVHVNGMWTQLKQRRIFLQGPARKLKGDCDPVDIAQMCRAGQNKI
DVSCADTDPGYVMVLQMVQNVGVEEVMDGIVARPRDTVEEGRERVRRSFP
AGSDDSDSDDELTATSTRLSLRCPLGLVPIRVPARGRRCGHLQCFDLSTF
LIFSERSSAAWRCGVCHLLILPADMVVDAFLMDVVRTLGERVADVEEVEI
FPDGRWE
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mRNA from alignment at P-wetherbeei_contig7483:272..2149-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7483.1.1 ID=mRNA_P-wetherbeei_contig7483.1.1|Name=mRNA_P-wetherbeei_contig7483.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1878bp|location=Sequence derived from alignment at P-wetherbeei_contig7483:272..2149- (Phaeothamnion wetherbeei SAG_119_79)
TGGCCGGCGGAGACGGTAGTGCACGTCAACGGCATGTGGACGCAGCTGAA GCAGCGACGAATCTTCCTGCAGGTGGGTCGGGGGAATGAAGAGCCTGATT TTTCGCAACCGACGTAACTGCCGCAACGCAGTAGAAGAGATTCAAGGCAT TCTGCAGGTCTTGCGCTTTGAGTTTTAATCGTGTTTCGTCCATCTTTGGC TGGTTGTGCTAGTCGGGGTTTGGCGACGTGGTTGCCGTATTGTATCCTTG AAGGGCCGCTTTATATAATCAGTGTCAAATTAGCTGCTGTGGACTGCGCT GCGCTTCGAGCGCGCACCTGTTTCTGGAAAGGGAGAGTCATCGTTATCTT TCACTGCAGATTCACCAGGGCCGCTGCTTGCTCCCGGCTCAGCACCACTC CCTCGGGGATCCTCCTGCTGGTCTCATTCCTCTCGGCGGCTCGACCCCAA CCGCGTCTTCCGTTCCTTTTCCTCTTCTCTTCTTTTCTTTTGTCGGGTGG GGGTAATTCACGGCACGAAACAAGCAGGGCCCGGCGAGGAAGCTCAAGGG AGACTGCGATCCGGTGGACATCGCCCAGATGTGCCGCGCGGGGCAGAACA AAATCGACGTGTCGTGCGCCGACACGGACCCCGGCTACGTCATGGTGCTC CAAGTGAGATAAAGCCAGTTCCTCCGCCTGTGCCACTCTGCCAAAAGCCG GCTAGCCGAAGCGATAAGTCCGGCTTTTCGTTTTTCTTTGCTTTCCCTGT CCGCGTCTTTCGTGTTGTGCTGCCTTCTTCCTGAAGCATGTGACAACAGT GGTCTGCCGTCCAAGGCCGAAACGCAACGAACCCTGTTGGGCTCTCTGGC TCCGTTTCCCCTTTCTTGAATCGTTTCTGTTCCCCCGTCCTCTCTTCGCT AACTTCTTCGTCCGTTCAGTTTTTTGCCGCCGACTGCACTTTTTCTTCTC GCATTATCTCCCCCCAGATGGTGCAAAACGTGGGCGTGGAGGAGGTGATG GACGGCATTGTCGCCCGCCCGCGGGACACCGTCGAGGAAGGCAGGGAGCG CGTGCGGCGCTCCTTCCGTGGGCAGCCCCTCGATGGCTCTGGCGTTGCCG TCGCTGTCGCAGCTGCAAAAAGCGGCGGGAGTGATAGCGGCGGCGGCGGC GGAACCTCCGCGTCGTCGGTGCGGCGAAAAGAAGGAGCGGCGGGCAGCGA CGACAGCGACAGCGACGACGAGCTGACGGCGACGTCGACGCGGCTGTCGC TGCGCTGCCCGCTGGGGCTGGTGCCGATCCGCGTGCCAGCGCGCGGGCGG CGCTGCGGTCACCTGCAGTGCTTCGACTTGTCGACGTTTCTCATCTTCAG CGAGCGATCGAGCGCTGCATGGCGGTGCGGCGTCTGCCACCTCCTCATCT TGCCCGCCGACATGGTGAGTATAATTTTTCTTTTCTGTTCCCAGTTCTGT TATTGAGTTTATTTTCAACTTTTCACGAGGCGGTGGAATGATCGGCTTCG CTGGTTGGTGGCGCCTGAGCAATCGGCTTGTGTTGCGGATGGCACTGTTG GTGTGTTCACTTTTCGCACTGAACGCTCACGGCAAGTGGGTTATTCTCTA ACAAAAAAACTTCTACGAAAGACAGTCGATATGTTTTTCAAAGTTGCCCC TCATTCCGATGCCTTTTCCATGTGCATAGCGGATGCGACGGCTTTTCTGG TCGCAACCGCCACCACTGTCCCATATCGCCCATCCTCCTTCCCTTTCTTG CGCCGCCGCCACTTCTCGTGGGAAACTAACAGGTTGTGGACGCTTTCCTG ATGGACGTGGTGCGGACGCTCGGCGAGCGCGTGGCGGACGTGGAGGAAGT TGAAATCTTCCCGGACGGCCGCTGGGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7483:272..2149-

>mRNA_P-wetherbeei_contig7483.1.1 ID=mRNA_P-wetherbeei_contig7483.1.1|Name=mRNA_P-wetherbeei_contig7483.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig7483:272..2149- (Phaeothamnion wetherbeei SAG_119_79)
TGGCCGGCGGAGACGGTAGTGCACGTCAACGGCATGTGGACGCAGCTGAA
GCAGCGACGAATCTTCCTGCAGGGCCCGGCGAGGAAGCTCAAGGGAGACT
GCGATCCGGTGGACATCGCCCAGATGTGCCGCGCGGGGCAGAACAAAATC
GACGTGTCGTGCGCCGACACGGACCCCGGCTACGTCATGGTGCTCCAAAT
GGTGCAAAACGTGGGCGTGGAGGAGGTGATGGACGGCATTGTCGCCCGCC
CGCGGGACACCGTCGAGGAAGGCAGGGAGCGCGTGCGGCGCTCCTTCCCG
GCGGGCAGCGACGACAGCGACAGCGACGACGAGCTGACGGCGACGTCGAC
GCGGCTGTCGCTGCGCTGCCCGCTGGGGCTGGTGCCGATCCGCGTGCCAG
CGCGCGGGCGGCGCTGCGGTCACCTGCAGTGCTTCGACTTGTCGACGTTT
CTCATCTTCAGCGAGCGATCGAGCGCTGCATGGCGGTGCGGCGTCTGCCA
CCTCCTCATCTTGCCCGCCGACATGGTTGTGGACGCTTTCCTGATGGACG
TGGTGCGGACGCTCGGCGAGCGCGTGGCGGACGTGGAGGAAGTTGAAATC
TTCCCGGACGGCCGCTGGGAG
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