prot_P-wetherbeei_contig744.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig744.2.1
Unique Nameprot_P-wetherbeei_contig744.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length231
Homology
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A3C0TTP5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TTP5_9PROT)

HSP 1 Score: 241 bits (615), Expect = 7.630e-77
Identity = 124/241 (51.45%), Postives = 166/241 (68.88%), Query Frame = 0
Query:    1 MALFCLAGVSLAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANP-----------AAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDVAR 230
            +A+    G  L ACQ S  ++ PA P   ++D++PITV+P +E L LSP   G+ L   D   I  FAGGYLQ GHGPL+I++  +P++P A  QM A+N  L ERGV  +++EWRIA+PD A+            AAAPA   + F+YTRYVA+ E+ C  W KD + +HDN+ WENFGCA Q+N+AAMV DPLDLKRPR   P+D DRRTVV+K+YR+G+ATAA+R+ AEKG +S+VA+
Sbjct:   22 LAVLAALGGMLGACQ-SEQVMFPATPQKKLEDRYPITVAPKTESLTLSPRPIGKKLGDKDTSQINGFAGGYLQQGHGPLAIIMSGVPSSPQALAQMQAVNGALRERGVARSQIEWRIASPDPASDSGESPGAPAGKAAAPAQ--LTFTYTRYVASVEKPCENWSKDFSDYHDNKSWENFGCAHQHNLAAMVADPLDLKRPRDVDPIDADRRTVVLKSYREGKATAAERSEAEKGMVSEVAK 259          
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A2N3EC66_9PROT (Pilus assembly protein CpaD n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EC66_9PROT)

HSP 1 Score: 134 bits (336), Expect = 3.610e-35
Identity = 79/203 (38.92%), Postives = 108/203 (53.20%), Query Frame = 0
Query:   29 DVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPA-IPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDVAR 230
            D     PI+V P    LN+       GL   + R I  FA  Y + GHG L++  P+   N   A   ++ +   LAE GV    + +   TP +A+   A  A P++ SY RYVA A   CG+W   +A  + N P  NFGCA QNN+AAM+ DP DL +PR  TP D  RR  V++ YR+GE TA  RT  + G +S V++
Sbjct:   35 DAARVHPISVQPDVATLNIDVPPGQPGLTAENRRAIAGFAASYRERGHGSLTVSTPSGSTNATTATGVLSDVRDALAEHGVSGDALAY---TPYSAS---ASGAAPLILSYKRYVAKAST-CGDWSASLATDYKNVPPPNFGCATQNNLAAMIADPADLLKPRGMTPADASRRNTVLEKYREGEPTATARTDQDSGAVSRVSQ 230          
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A2D4VF09_9HYPH (Uncharacterized protein n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D4VF09_9HYPH)

HSP 1 Score: 116 bits (291), Expect = 2.370e-28
Identity = 72/195 (36.92%), Postives = 104/195 (53.33%), Query Frame = 0
Query:   35 PITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIP-NTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDV 228
            PITVS  +  L L   +    L       I  FA  Y + GHGP+ + +P    N   A+  +N ++  LA+ GV   +V ++         A    + P+V ++ RYVA A   CG+W  + + +  N    NFGCA QNN+AAMV DP DL  PR   P D DRR+ V++ YRKGE+TA QR+ ++   +S+V
Sbjct:   53 PITVSKDTATLKLDAAMDLGYLNGRQKAQIASFARAYTERGHGPMVVSVPDRSLNKGAASDFLNDVSRALADEGVTDDRVVYK-----PYQVAGDKNSAPVVMTFNRYVAQASP-CGDWSANYSYNPKNLNPPNFGCATQNNLAAMVADPSDLVHPRTMDPADADRRSTVLEKYRKGESTATQRSDSDSAAVSEV 241          
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: UPI001781EC3F (CpaD family pilus assembly protein n=2 Tax=Agrobacterium sp. AGB01 TaxID=2769302 RepID=UPI001781EC3F)

HSP 1 Score: 116 bits (290), Expect = 2.500e-28
Identity = 76/206 (36.89%), Postives = 109/206 (52.91%), Query Frame = 0
Query:   11 LAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPA-IPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHD-NQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATA 214
            L AC   + + + A P  D + + PIT++     +++  +     L T  A  I  F   Y     G + I LP+  PN+  A++    I T+L   GVPA K+   + T  AA P     A P+  SY   V A   +CGEWP+D+  +   N+ W NFGCA QNN+AA + +P+DL  PR  TP+D +RR+VVI  YR G+ TA
Sbjct:   29 LQACGTRDGMNTGAIPD-DYRTRHPITLNEAEHTIDIPVSSGDSRLTTPAADNIRGFVSSYKGTSTGIVQIQLPSGSPNSAAASRMGKQIRTILTGSGVPAGKI---VETVYAAGPQGD--AAPIRLSYVA-VTAMTGQCGEWPEDLTSNTSKNRNWHNFGCATQNNLAAQIANPMDLVAPRGMTPIDAERRSVVIDGYRNGDNTA 227          
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: UPI00142213DC (CpaD family pilus assembly protein n=1 Tax=Parvibaculum indicum TaxID=562969 RepID=UPI00142213DC)

HSP 1 Score: 116 bits (290), Expect = 2.890e-28
Identity = 71/199 (35.68%), Postives = 107/199 (53.77%), Query Frame = 0
Query:   31 KDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIP-NTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDV 228
            ++  PITVS     L L   +    L       +  FA  Y + GHGP+ + +P    N   A+  +N ++  LA+ GV   +V ++         AA   + P+V ++ RYVA A   CG+W  + + +  N    NFGCA QNN+AA++ DP DL  PR   P D +RR+VV+  YRKGE+TAAQR  ++  ++S+V
Sbjct:   43 ENMHPITVSKDVATLKLDAAMDLGYLNDRQKMQVAAFARAYTERGHGPIVVSVPDRSLNKGAASYFLNDVSRALADEGVTDDRVVYK-----PYQVAADKTSAPVVMTFNRYVAQASP-CGDWSMNYSYNPKNLNPPNFGCATQNNLAAVIADPADLVHPRTMDPADAERRSVVLDKYRKGESTAAQRADSDSASVSEV 235          
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A4R3M7E6_9HYPH (Pilus assembly protein CpaD n=1 Tax=Tepidamorphus gemmatus TaxID=747076 RepID=A0A4R3M7E6_9HYPH)

HSP 1 Score: 114 bits (286), Expect = 1.050e-27
Identity = 79/219 (36.07%), Postives = 114/219 (52.05%), Query Frame = 0
Query:   11 LAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLP-AIPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDV 228
            LAACQ S+ +++ + PT  V+ ++PI + P    L+L+ T  G GL + D  ++ +F   + + G G L ++ P    N   AA  +  +  +  + G+P   V   +       P      GP+  SY R VA  E  CG WP +IA +  N P+ENFGCA Q N+AAMV DP DL  PR  TP D  RR  V   YR+GE  +    + + G IS+V
Sbjct:   26 LAACQ-SDRVVTGSVPT-SVEQRYPIGIIPERPKLDLNAT--GYGLSSPDRAMVEEFVLSWRERGTGGLDVLTPIGTANEAEAASVVAEVKAIAYDFGMPVEAVS--VTGYHTTQPF-----GPVRLSYDRLVAKLE--CGAWPTNIAENWRNVPYENFGCATQKNLAAMVEDPRDLAGPRPMTPRDARRRDEVFDKYRRGEDPSTVYQSDDAGQISEV 231          
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A3B9YPQ2_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9YPQ2_9PROT)

HSP 1 Score: 114 bits (286), Expect = 1.490e-27
Identity = 84/235 (35.74%), Postives = 112/235 (47.66%), Query Frame = 0
Query:    1 MALFCLAGVSLAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIPNTPMAAKQM--NAINTVLAERGVPAAKVEWRIATPDAANPA-AAPAAGPMVFSYTRYVAAAERRCGE--WPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDVAR 230
            +AL  L GV  A C +  Y     A    V  +FPITV P    LN+ P  A  GL   D   +  FA  +   G G +++ +P      +A + +  +A+   LA  GVP A ++       AA PA   P   P+  SY    A A   C E  W  ++     N PW NFGCA QNN+AAMV +P DL  PR T  VDV RR  V+  +R  + TA +R   E G +S  A+
Sbjct:   19 LALSALMGVMAAGCSHPLYNSEEQAI--QVDQRFPITVEPQMTNLNIYPNGANHGLSADDRARVVAFAERWKARGQGAITVAIPQGGADGLAGEHLAHHAVKA-LASAGVPRANIQT------AAYPAHRMPGGAPVTISYVGLTAVAPD-CSELGWEDNLGFAPRNMPWNNFGCATQNNLAAMVNNPRDLIEPRPTDDVDVRRRMKVVDDFRNAKPTATKRQQEESGNVSAAAK 243          
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A081BBB6_9HYPH (Pilus biogenesis lipoprotein CpaD n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BBB6_9HYPH)

HSP 1 Score: 113 bits (283), Expect = 2.410e-27
Identity = 75/203 (36.95%), Postives = 98/203 (48.28%), Query Frame = 0
Query:   29 DVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPA-IPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDVAR 230
            D   + PI V P      +        L   D   +   A  + + GHG L+I  P+  PNT +A      I  +L E G+  + +        AAN AA     P++ SY RYVA     CG W  D A +  N    N GCA QNNMAA++ DP DLK PR T P    RR  V+  YRKGE+TA +R   E G +S+V+R
Sbjct:   30 DAARRHPIAVDPQIMTYEIPAAPDKIALTLEDKSALRALARAFKERGHGSLNIAAPSGSPNTGVALNLSTEIGQLLHEEGIAHSDISHGTYRASAANSAA-----PLILSYRRYVATPSP-CGNWG-DYAYNPKNVVTSNLGCASQNNMAAILADPADLKGPRGTDPAYAPRRDEVLTKYRKGESTATERVEEESGNVSEVSR 225          
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A2D8XC78_9HYPH (Pilus assembly protein CpaD n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D8XC78_9HYPH)

HSP 1 Score: 114 bits (284), Expect = 3.300e-27
Identity = 73/202 (36.14%), Postives = 100/202 (49.50%), Query Frame = 0
Query:   29 DVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPA-IPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDVA 229
            D + + PI+V P    L +        L   D   I  FA  Y   GHG L+I  P+  PN   A   +      LA+ G+  ++V +      +AN +A     P++ +Y RYVA+A   CG W KD A   +N    NFGCA QNN+AA+V DP DL  PR   P    RR  V++ YR GE T A  +    G++S+VA
Sbjct:   57 DARYQHPISVDPQVVTLQMDVPKDKVALSLADKAAIDAFARSYKSRGHGTLTIAAPSGSPNEAAAVSIVAETRAALADAGLNGSEVGYAAYRASSANSSA-----PVILTYRRYVASASP-CGNWSKDYAFAPNNARTPNFGCATQNNLAAIVADPADLIGPREWDPAYAPRRDEVVEKYRTGEVTEAAESGNSSGSVSEVA 252          
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A2G2LW75_9PROT (Pilus assembly protein CpaD n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2LW75_9PROT)

HSP 1 Score: 112 bits (280), Expect = 1.170e-26
Identity = 71/198 (35.86%), Postives = 102/198 (51.52%), Query Frame = 0
Query:   32 DKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIPNTPMAA-KQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDV 228
            D+  ITV    E L+L+      GL     R +  +A  YL  G+GPL+I  P   +T + A + +     +L E G+     +W +        A+     P++ S+TRY A A+   G W +++  H  N   +NFGCA+  N AAM+ +P DL RPRAT P    RR  V+  Y  GEAT+ +RTA EKGT+S  
Sbjct:   57 DQHKITVQQTQENLSLALAPNMAGLTEAQKRKLHGYAAAYLDHGYGPLAISAPQGADTSIVAGRAIQQTRKILFEAGI-----DWAVIAKGRYQ-ASGTTGSPLLLSFTRYEARAQGCDGRW-RNLVIHPGNNESDNFGCALATNTAAMIANPYDLVRPRATEPASTARRQTVMDKYIAGEATSGKRTADEKGTVSSA 247          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TTP5_9PROT7.630e-7751.45Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A2N3EC66_9PROT3.610e-3538.92Pilus assembly protein CpaD n=1 Tax=Alphaproteobac... [more]
A0A2D4VF09_9HYPH2.370e-2836.92Uncharacterized protein n=1 Tax=Parvibaculum sp. T... [more]
UPI001781EC3F2.500e-2836.89CpaD family pilus assembly protein n=2 Tax=Agrobac... [more]
UPI00142213DC2.890e-2835.68CpaD family pilus assembly protein n=1 Tax=Parviba... [more]
A0A4R3M7E6_9HYPH1.050e-2736.07Pilus assembly protein CpaD n=1 Tax=Tepidamorphus ... [more]
A0A3B9YPQ2_9PROT1.490e-2735.74Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A081BBB6_9HYPH2.410e-2736.95Pilus biogenesis lipoprotein CpaD n=1 Tax=Tepidica... [more]
A0A2D8XC78_9HYPH3.300e-2736.14Pilus assembly protein CpaD n=2 Tax=Hyphomicrobial... [more]
A0A2G2LW75_9PROT1.170e-2635.86Pilus assembly protein CpaD n=1 Tax=Robiginitomacu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013361Pilus biogenesis CpaDTIGRFAMTIGR02522TIGR02522coord: 4..210
e-value: 1.3E-36
score: 124.2
IPR019027Pilus biogenesis CpaD-relatedPFAMPF09476Pilus_CpaDcoord: 6..209
e-value: 5.8E-45
score: 153.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig744contigP-wetherbeei_contig744:1465..2157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig744.2.1mRNA_P-wetherbeei_contig744.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig744 1447..2157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig744.2.1 ID=prot_P-wetherbeei_contig744.2.1|Name=mRNA_P-wetherbeei_contig744.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=231bp
MALFCLAGVSLAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPT
LAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIPNTPMAAKQMNAIN
TVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCG
EWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRR
TVVIKAYRKGEATAAQRTAAEKGTISDVAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013361Pilus_CpaD
IPR019027Pilus_biogenesis_CpaD-related