mRNA_P-wetherbeei_contig744.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A3C0TTP5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TTP5_9PROT) HSP 1 Score: 244 bits (622), Expect = 8.280e-78 Identity = 125/242 (51.65%), Postives = 167/242 (69.01%), Query Frame = 1
Query: 16 RMALFCLAGVSLAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANP-----------AAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDVAR 708
R+A+ G L ACQ S ++ PA P ++D++PITV+P +E L LSP G+ L D I FAGGYLQ GHGPL+I++ +P++P A QM A+N L ERGV +++EWRIA+PD A+ AAAPA + F+YTRYVA+ E+ C W KD + +HDN+ WENFGCA Q+N+AAMV DPLDLKRPR P+D DRRTVV+K+YR+G+ATAA+R+ AEKG +S+VA+
Sbjct: 21 RLAVLAALGGMLGACQ-SEQVMFPATPQKKLEDRYPITVAPKTESLTLSPRPIGKKLGDKDTSQINGFAGGYLQQGHGPLAIIMSGVPSSPQALAQMQAVNGALRERGVARSQIEWRIASPDPASDSGESPGAPAGKAAAPAQ--LTFTYTRYVASVEKPCENWSKDFSDYHDNKSWENFGCAHQHNLAAMVADPLDLKRPRDVDPIDADRRTVVLKSYREGKATAAERSEAEKGMVSEVAK 259
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A2N3EC66_9PROT (Pilus assembly protein CpaD n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EC66_9PROT) HSP 1 Score: 134 bits (336), Expect = 4.340e-35 Identity = 79/203 (38.92%), Postives = 108/203 (53.20%), Query Frame = 1
Query: 103 DVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPA-IPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDVAR 708
D PI+V P LN+ GL + R I FA Y + GHG L++ P+ N A ++ + LAE GV + + TP +A+ A A P++ SY RYVA A CG+W +A + N P NFGCA QNN+AAM+ DP DL +PR TP D RR V++ YR+GE TA RT + G +S V++
Sbjct: 35 DAARVHPISVQPDVATLNIDVPPGQPGLTAENRRAIAGFAASYRERGHGSLTVSTPSGSTNATTATGVLSDVRDALAEHGVSGDALAY---TPYSAS---ASGAAPLILSYKRYVAKAST-CGDWSASLATDYKNVPPPNFGCATQNNLAAMIADPADLLKPRGMTPADASRRNTVLEKYREGEPTATARTDQDSGAVSRVSQ 230
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A2D4VF09_9HYPH (Uncharacterized protein n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D4VF09_9HYPH) HSP 1 Score: 117 bits (292), Expect = 2.000e-28 Identity = 80/224 (35.71%), Postives = 117/224 (52.23%), Query Frame = 1
Query: 34 LAGVSLAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIP-NTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDV 702
+A ++LA C N A TP+ + PITVS + L L + L I FA Y + GHGP+ + +P N A+ +N ++ LA+ GV +V ++ A + P+V ++ RYVA A CG+W + + + N NFGCA QNN+AAMV DP DL PR P D DRR+ V++ YRKGE+TA QR+ ++ +S+V
Sbjct: 27 VAMLALAGCGGFNG-REEALYTPE--NVHPITVSKDTATLKLDAAMDLGYLNGRQKAQIASFARAYTERGHGPMVVSVPDRSLNKGAASDFLNDVSRALADEGVTDDRVVYK-----PYQVAGDKNSAPVVMTFNRYVAQASP-CGDWSANYSYNPKNLNPPNFGCATQNNLAAMVADPSDLVHPRTMDPADADRRSTVLEKYRKGESTATQRSDSDSAAVSEV 241
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: UPI001781EC3F (CpaD family pilus assembly protein n=2 Tax=Agrobacterium sp. AGB01 TaxID=2769302 RepID=UPI001781EC3F) HSP 1 Score: 116 bits (291), Expect = 2.110e-28 Identity = 76/206 (36.89%), Postives = 109/206 (52.91%), Query Frame = 1
Query: 49 LAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPA-IPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHD-NQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATA 660
L AC + + + A P D + + PIT++ +++ + L T A I F Y G + I LP+ PN+ A++ I T+L GVPA K+ + T AA P A P+ SY V A +CGEWP+D+ + N+ W NFGCA QNN+AA + +P+DL PR TP+D +RR+VVI YR G+ TA
Sbjct: 29 LQACGTRDGMNTGAIPD-DYRTRHPITLNEAEHTIDIPVSSGDSRLTTPAADNIRGFVSSYKGTSTGIVQIQLPSGSPNSAAASRMGKQIRTILTGSGVPAGKI---VETVYAAGPQGD--AAPIRLSYVA-VTAMTGQCGEWPEDLTSNTSKNRNWHNFGCATQNNLAAQIANPMDLVAPRGMTPIDAERRSVVIDGYRNGDNTA 227
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A4R3M7E6_9HYPH (Pilus assembly protein CpaD n=1 Tax=Tepidamorphus gemmatus TaxID=747076 RepID=A0A4R3M7E6_9HYPH) HSP 1 Score: 116 bits (291), Expect = 2.270e-28 Identity = 81/230 (35.22%), Postives = 118/230 (51.30%), Query Frame = 1
Query: 16 RMALFCLAGVSLAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLP-AIPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDV 702
R+A+ LAACQ S+ +++ + PT V+ ++PI + P L+L+ T G GL + D ++ +F + + G G L ++ P N AA + + + + G+P V + P GP+ SY R VA E CG WP +IA + N P+ENFGCA Q N+AAMV DP DL PR TP D RR V YR+GE + + + G IS+V
Sbjct: 15 RLAVLAALTALLAACQ-SDRVVTGSVPT-SVEQRYPIGIIPERPKLDLNAT--GYGLSSPDRAMVEEFVLSWRERGTGGLDVLTPIGTANEAEAASVVAEVKAIAYDFGMPVEAVS--VTGYHTTQPF-----GPVRLSYDRLVAKLE--CGAWPTNIAENWRNVPYENFGCATQKNLAAMVEDPRDLAGPRPMTPRDARRRDEVFDKYRRGEDPSTVYQSDDAGQISEV 231
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: UPI00142213DC (CpaD family pilus assembly protein n=1 Tax=Parvibaculum indicum TaxID=562969 RepID=UPI00142213DC) HSP 1 Score: 116 bits (290), Expect = 3.430e-28 Identity = 71/199 (35.68%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 109 KDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIP-NTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDV 702
++ PITVS L L + L + FA Y + GHGP+ + +P N A+ +N ++ LA+ GV +V ++ AA + P+V ++ RYVA A CG+W + + + N NFGCA QNN+AA++ DP DL PR P D +RR+VV+ YRKGE+TAAQR ++ ++S+V
Sbjct: 43 ENMHPITVSKDVATLKLDAAMDLGYLNDRQKMQVAAFARAYTERGHGPIVVSVPDRSLNKGAASYFLNDVSRALADEGVTDDRVVYK-----PYQVAADKTSAPVVMTFNRYVAQASP-CGDWSMNYSYNPKNLNPPNFGCATQNNLAAVIADPADLVHPRTMDPADAERRSVVLDKYRKGESTAAQRADSDSASVSEV 235
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A3B9YPQ2_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9YPQ2_9PROT) HSP 1 Score: 115 bits (288), Expect = 8.980e-28 Identity = 84/235 (35.74%), Postives = 112/235 (47.66%), Query Frame = 1
Query: 19 MALFCLAGVSLAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIPNTPMAAKQM--NAINTVLAERGVPAAKVEWRIATPDAANPA-AAPAAGPMVFSYTRYVAAAERRCGE--WPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDVAR 708
+AL L GV A C + Y A V +FPITV P LN+ P A GL D + FA + G G +++ +P +A + + +A+ LA GVP A ++ AA PA P P+ SY A A C E W ++ N PW NFGCA QNN+AAMV +P DL PR T VDV RR V+ +R + TA +R E G +S A+
Sbjct: 19 LALSALMGVMAAGCSHPLYNSEEQAI--QVDQRFPITVEPQMTNLNIYPNGANHGLSADDRARVVAFAERWKARGQGAITVAIPQGGADGLAGEHLAHHAVKA-LASAGVPRANIQT------AAYPAHRMPGGAPVTISYVGLTAVAPD-CSELGWEDNLGFAPRNMPWNNFGCATQNNLAAMVNNPRDLIEPRPTDDVDVRRRMKVVDDFRNAKPTATKRQQEESGNVSAAAK 243
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A081BBB6_9HYPH (Pilus biogenesis lipoprotein CpaD n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BBB6_9HYPH) HSP 1 Score: 114 bits (284), Expect = 2.020e-27 Identity = 80/221 (36.20%), Postives = 104/221 (47.06%), Query Frame = 1
Query: 49 LAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPA-IPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDVAR 708
LAAC N + D + PI V P + L D + A + + GHG L+I P+ PNT +A I +L E G+ + + AAN AA P++ SY RYVA CG W D A + N N GCA QNNMAA++ DP DLK PR T P RR V+ YRKGE+TA +R E G +S+V+R
Sbjct: 15 LAACGGFNGVEQAQY---DAARRHPIAVDPQIMTYEIPAAPDKIALTLEDKSALRALARAFKERGHGSLNIAAPSGSPNTGVALNLSTEIGQLLHEEGIAHSDISHGTYRASAANSAA-----PLILSYRRYVATPSP-CGNWG-DYAYNPKNVVTSNLGCASQNNMAAILADPADLKGPRGTDPAYAPRRDEVLTKYRKGESTATERVEEESGNVSEVSR 225
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A2D8XC78_9HYPH (Pilus assembly protein CpaD n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D8XC78_9HYPH) HSP 1 Score: 114 bits (284), Expect = 3.910e-27 Identity = 73/202 (36.14%), Postives = 100/202 (49.50%), Query Frame = 1
Query: 103 DVKDKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPA-IPNTPMAAKQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDVA 705
D + + PI+V P L + L D I FA Y GHG L+I P+ PN A + LA+ G+ ++V + +AN +A P++ +Y RYVA+A CG W KD A +N NFGCA QNN+AA+V DP DL PR P RR V++ YR GE T A + G++S+VA
Sbjct: 57 DARYQHPISVDPQVVTLQMDVPKDKVALSLADKAAIDAFARSYKSRGHGTLTIAAPSGSPNEAAAVSIVAETRAALADAGLNGSEVGYAAYRASSANSSA-----PVILTYRRYVASASP-CGNWSKDYAFAPNNARTPNFGCATQNNLAAIVADPADLIGPREWDPAYAPRRDEVVEKYRTGEVTEAAESGNSSGSVSEVA 252
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Match: A0A2G2LW75_9PROT (Pilus assembly protein CpaD n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2LW75_9PROT) HSP 1 Score: 112 bits (280), Expect = 1.380e-26 Identity = 71/198 (35.86%), Postives = 102/198 (51.52%), Query Frame = 1
Query: 112 DKFPITVSPHSEILNLSPTLAGQGLQTTDARLITDFAGGYLQDGHGPLSIVLPAIPNTPMAA-KQMNAINTVLAERGVPAAKVEWRIATPDAANPAAAPAAGPMVFSYTRYVAAAERRCGEWPKDIARHHDNQPWENFGCAVQNNMAAMVTDPLDLKRPRATTPVDVDRRTVVIKAYRKGEATAAQRTAAEKGTISDV 702
D+ ITV E L+L+ GL R + +A YL G+GPL+I P +T + A + + +L E G+ +W + A+ P++ S+TRY A A+ G W +++ H N +NFGCA+ N AAM+ +P DL RPRAT P RR V+ Y GEAT+ +RTA EKGT+S
Sbjct: 57 DQHKITVQQTQENLSLALAPNMAGLTEAQKRKLHGYAAAYLDHGYGPLAISAPQGADTSIVAGRAIQQTRKILFEAGI-----DWAVIAKGRYQ-ASGTTGSPLLLSFTRYEARAQGCDGRW-RNLVIHPGNNESDNFGCALATNTAAMIANPYDLVRPRATEPASTARRQTVMDKYIAGEATSGKRTADEKGTVSSA 247 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig744.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig744.2.1 >prot_P-wetherbeei_contig744.2.1 ID=prot_P-wetherbeei_contig744.2.1|Name=mRNA_P-wetherbeei_contig744.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=231bp MALFCLAGVSLAACQNSNYILSPAAPTPDVKDKFPITVSPHSEILNLSPTback to top mRNA from alignment at P-wetherbeei_contig744:1447..2157+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig744.2.1 ID=mRNA_P-wetherbeei_contig744.2.1|Name=mRNA_P-wetherbeei_contig744.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig744:1447..2157+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig744:1447..2157+ >mRNA_P-wetherbeei_contig744.2.1 ID=mRNA_P-wetherbeei_contig744.2.1|Name=mRNA_P-wetherbeei_contig744.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig744:1447..2157+ (Phaeothamnion wetherbeei SAG_119_79)back to top |