mRNA_P-wetherbeei_contig741.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A6H5K8M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M2_9PHAE) HSP 1 Score: 306 bits (784), Expect = 3.050e-91 Identity = 174/340 (51.18%), Postives = 212/340 (62.35%), Query Frame = 1
Query: 493 WTKFLHRSHLGYRRIMDREATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDGCALGITNLREAYYFSLETMTTVGYGTQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLL--PAASAPPGVDPEVFLRGQESGG---------------------------------PRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMPPPRWMSAQGVVQWGLHGDADYARAPWE 1407
W K + YR ++DRE Y QS GRWNI+R++ A ++ L D FH+ +N T ++L ++ Y+S+V FA Y I GC L +T++RE + FSLETMTTVGYGT D FG CW ML +++ QAC+GLLIDA LIGI+FARLSRPQTRA TVVF+K AVIRRVRGE YF+FQ +G+LRKHQLL+ VRCY +RH+RL P + E G S P VFFQ+H+MRLQHPDDELG +LLVLPQA VVHRIDAWSPMMPPPRW S+ G VQWGLH D D +APWE
Sbjct: 67 WLKARKKGEQAYR-LVDREGPYYQSVGRWNIRRLKTQ-ADVQKLIGLDPFHSFLNQSTLKIILRIIGLYLSLVFLFAIVYTTISHTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWVMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQ-IGELRKHQLLETRVRCYALRHERLTYNPCGNNNNVGSSESSGLGARSASVSSNIXXXXXXXXXXXXXXSTTVTSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQARGT--VVHRIDAWSPMMPPPRWNSSHGPVQWGLHTDKDIVKAPWE 401
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A835YU47_9STRA (Inward rectifier potassium channel-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU47_9STRA) HSP 1 Score: 287 bits (735), Expect = 3.540e-90 Identity = 155/280 (55.36%), Postives = 196/280 (70.00%), Query Frame = 1
Query: 421 RSSEKYGNIVFRHFWTSSTRHLETWTKFLHRSHLGYRRIMDREATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDGCALGITNLREAYYFSLETMTTVGYGTQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLV 1260
RS +++G ++ W S + ++ R++DR + + QSFGRWNI R + G++ L+ D FHT+++M T VL L + Y+++VT FAA YLAI DGC LGI + REAYYFSLETMTTVG+GTQDVFFG CWS++ +ITAQAC GLLIDA LIG++FARL RPQTRA+TVVFS AV+RR+RGE+YF+FQ V +LRKHQLL+ HVRCY +RH R LP +D L ES P TV +QTHNMRLQHPDDELG +MLLV
Sbjct: 1 RSKKRFGFLLGLRAWRSKAEPMPQRSQ----------RLIDRSSHFQQSFGRWNIGRNTKD-EGMRKLFSNDWFHTVLHMTTWKVLGALFLTYLAVVTVFAALYLAIARFDGCNLGIVDYREAYYFSLETMTTVGFGTQDVFFGRCWSVMVIITAQACSGLLIDALLIGLLFARLGRPQTRASTVVFSDKAVLRRIRGEYYFMFQ-VAELRKHQLLETHVRCYAVRHHRTLP-------IDANGAL--DESQPPETVHYQTHNMRLQHPDDELGGSMLLV 259
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A836CL18_9STRA (Inward rectifier potassium channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL18_9STRA) HSP 1 Score: 286 bits (732), Expect = 9.630e-90 Identity = 150/257 (58.37%), Postives = 185/257 (71.98%), Query Frame = 1
Query: 544 REATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDGCALGITNLREAYYFSLETMTTVGYGTQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWS 1314
R++TY QS+GRWNI R + I+ L+ D+FHT+++M T VL L Y+ +V+ FA YL I DGC +GI + REAYYFSLETMTTVGYGTQDVFFG CWS++ +ITAQAC GLLIDA LIG++FARL+RPQTRA+TVVFS AV+RR+RGE+YF+FQ VG+LRKHQLL+ VRCY +RH R LP +D L ++ P TV +QTHNMRLQHPDDELG A+LLVLPQ V + WS
Sbjct: 7 RDSTYHQSYGRWNIDRNTKD-DHIRTLFNNDRFHTVLHMTTWKVLSYLFFAYLVVVSTFALIYLIISHFDGCNMGIVDYREAYYFSLETMTTVGYGTQDVFFGRCWSVMVIITAQACCGLLIDALLIGVLFARLARPQTRASTVVFSNKAVLRRIRGEYYFMFQ-VGELRKHQLLETKVRCYAVRHHRTLP-------IDAAGCL--DDANPPETVHYQTHNMRLQHPDDELGGALLLVLPQVRARVAVFQKYAIWS 252
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A7S2JZ67_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZ67_9STRA) HSP 1 Score: 219 bits (557), Expect = 5.850e-61 Identity = 129/312 (41.35%), Postives = 173/312 (55.45%), Query Frame = 1
Query: 523 GYRRIMDREATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDG-------------------------CALGITNLREAYYFSLETMTTVGYGTQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGG--------PRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMPPPRWMSAQGVV 1359
G R++DR A Y QS G W I R + + QD FHTI+N+ T + I+ V Y+ IVTGFA YL I ++ C + I N EA YFS+ TMTT+GYG D +FG CW+ + Q L +A IG+IF RLSR Q RA TVVFS A+IRR++G+ YF+FQ + +LRKHQL++AHVR Y +RH+R ++ +V +R + S P T +FQTH MRLQHPDD LG +L+ LP +VVHR+D +SP+MPP +W A G +
Sbjct: 58 GNTRMLDRSAGYHQSRGEWRIHRKIPDKFHV--YWFQDVFHTILNLPTWRIFAIMFVAYLCIVTGFALLYLLIAKVNMYVVDVPINGSSDEASTGENSVTKSYCGMDIDNFSEAMYFSISTMTTIGYGISDYYFGDCWTPFAAVFMQVFTALTFNAVAIGVIFQRLSRGQNRATTVVFSDKAIIRRIKGKLYFMFQ-LCELRKHQLVEAHVRVYCVRHEREHKESN-------DVEMRKESSSXXXVDEEEEPDTCYFQTHAMRLQHPDDALGGFLLMALPN-----VVVHRLDKFSPLMPPAKWTDASGQI 354
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A6G0WDP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDP0_9STRA) HSP 1 Score: 211 bits (538), Expect = 4.550e-59 Identity = 120/275 (43.64%), Postives = 168/275 (61.09%), Query Frame = 1
Query: 526 YRRIMDREATYSQ-----SFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDG-CALGITNLREAYYFSLETMTTVGYG--TQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMP 1326
Y RI+DR+ Y + G +NIKR K +Y D FHTIIN T+ V++ + V Y ++ FA CY I + D C +GI+ L EAY FS+ET+ T+GYG T D+F+GGC SM ++T ++ G+ +DA IG+ F R SR TRA +++FS AVIR++RG++YF+FQ V + RKHQL +AHVRCY +RH+ + P+ G FQTH+MR+Q PDD++G+ +L+ LPQ +VVHRID WSPM P
Sbjct: 36 YARILDRDGYYDHDGVPTTTGSYNIKRTG---GNWKKIYWDDLFHTIINTRTTRVIVGVFVAYAIVIFLFALCYRYISVNDPRCNVGISTLMEAYIFSVETIMTIGYGAPTNDIFYGGCGSMAVILTLESFSGIFLDAVCIGMFFVRFSRATTRACSIIFSNYAVIRKIRGDYYFMFQ-VCERRKHQLAEAHVRCYAVRHE-----------ISPD---------GTEEALFQTHHMRIQQPDDDIGAFLLMALPQ-----VVVHRIDQWSPMFP 281
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: T0R5G6_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R5G6_SAPDV) HSP 1 Score: 206 bits (525), Expect = 2.090e-57 Identity = 116/257 (45.14%), Postives = 163/257 (63.42%), Query Frame = 1
Query: 565 SFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDG-CALGITNLREAYYFSLETMTTVGYG--TQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMP 1326
SFG++NI+RV + +Y D +HT+IN T ++ + V Y ++ FA Y + L D C +GIT+L EAY FS+ET+ T+GYG + D+F+GGC SM F++T ++ G+ +D+ LIG+ F R SR TRA ++VFSK AVIR++RG +Y +FQ V + RKHQL++AHVRCY IRH+ AP G + FQTH+MRLQ PDD++G+ +L+ LPQ LVVHRID WSP+ P
Sbjct: 46 SFGKYNIERVG---GSWRQIYWDDLYHTVINTRTVRLVTAVFVVYAFVIFFFALAYQTVSLKDPECHVGITSLTEAYIFSVETIMTIGYGAPSDDIFYGGCGSMAFLLTMESFAGIFLDSILIGMFFVRFSRADTRALSIVFSKDAVIRKIRGSYYLMFQ-VCERRKHQLVEAHVRCYGIRHE------IAPDGTE--------------EALFQTHHMRLQQPDDDIGAYLLMALPQ-----LVVHRIDQWSPLFP 273
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A1W0A2N1_9STRA (Inward rectifier K channel (IRK-C) family protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2N1_9STRA) HSP 1 Score: 206 bits (524), Expect = 2.630e-57 Identity = 118/257 (45.91%), Postives = 164/257 (63.81%), Query Frame = 1
Query: 565 SFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDG-CALGITNLREAYYFSLETMTTVGYG--TQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMP 1326
SFG +NI+RV + +Y D FHT+IN TS ++ + V Y ++ FA Y I D C +GI +L EAY FS+ET+ T+GYG + D+F+GGC SM F++T ++ G+ +D+ LIG+ F R SR TRA ++VFSK AVIR++RG +YF+FQ V + RKHQL++AHVRCY IR+ EV G E +FFQTH+MRLQ PDD++G+ +L+ LPQ +V+HRIDAWSP+ P
Sbjct: 43 SFGIYNIQRVG---GAWRKIYWDDMFHTVINTRTSRLVTAVFVVYALVIFFFAIAYQTISEKDPECHVGIKSLTEAYIFSVETIMTIGYGAPSDDIFYGGCSSMAFLLTMESFSGIFLDSILIGMFFVRFSRADTRAYSIVFSKDAVIRKIRGHYYFMFQ-VCERRKHQLVEAHVRCYGIRN---------------EVSADGDEG-----LFFQTHHMRLQQPDDDIGAYLLMALPQ-----IVIHRIDAWSPLFP 270
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A8K1CKD0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKD0_PYTOL) HSP 1 Score: 202 bits (514), Expect = 6.510e-56 Identity = 114/269 (42.38%), Postives = 164/269 (60.97%), Query Frame = 1
Query: 532 RIMDREATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGL-LDGCALGITNLREAYYFSLETMTTVGYG--TQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMPP 1329
R +DRE + QS GR+NIKRV + +Y D FHT+IN TS + + + Y ++ FA YL I + C +GI L EAY FSLET+ T+GYG T D+F+GGC +M ++T ++ G+ +D+ IG+ +AR +R RA TV+FS TAVIR++RGE+YF+ Q V + RKHQL++AHVR Y +RH +L +P + +Q+H MR+Q PDD+ G+ +L+ LPQ ++VHRID WSP+ PP
Sbjct: 16 RFLDREGRFRQSMGRYNIKRVG---GDWRRIYTDDLFHTVINTRTSRIATGIFLAYALVIFFFALAYLDISMNRQECHVGIKTLMEAYIFSLETIMTIGYGAPTNDIFYGGCSTMAVLLTLESFAGIFLDSICIGMFYARFARANKRAQTVMFSNTAVIRKIRGEYYFMLQ-VCERRKHQLVEAHVRLYAMRH--VLAHDGSP------------------DMLYQSHQMRVQQPDDDTGAMLLIALPQ-----VIVHRIDPWSPLFPP 255
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A024TD03_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TD03_9STRA) HSP 1 Score: 199 bits (507), Expect = 5.040e-55 Identity = 109/255 (42.75%), Postives = 156/255 (61.18%), Query Frame = 1
Query: 571 GRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDG-CALGITNLREAYYFSLETMTTVGYG--TQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMP 1326
G +NI+R + +Y D FHTIIN TS V+ + Y ++ FA CY + + D C +G+T + EAY FS+ET+ T+GYG + D+F+GGC SM ++T ++ G+ +DA IG+ F R SR TRA +++FS AVIR++RG++YF+FQ V + RKHQL +AHVRCY +RH+ F ++ T FQTH+MRLQ PDD++G+ +L+ LPQ +VVHRID WSP P
Sbjct: 54 GSYNIRRTG---GNWRKIYWDDLFHTIINTRTSRVIAGVFGAYAIVIFLFALCYRYVSVNDPTCNVGVTTIMEAYIFSVETIMTIGYGAPSNDIFYGGCGSMAVILTLESFSGIFLDAVCIGMFFVRFSRATTRACSIIFSNFAVIRKIRGDYYFMFQ-VCERRKHQLAEAHVRCYAVRHE----------------FDVSKDGVAEETALFQTHHMRLQQPDDDIGAFLLMALPQ-----VVVHRIDPWSPFFP 283
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A0P1B7L9_PLAHL (Animal inward rectifier k channel (Irk-c) family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7L9_PLAHL) HSP 1 Score: 200 bits (509), Expect = 5.200e-55 Identity = 108/269 (40.15%), Postives = 165/269 (61.34%), Query Frame = 1
Query: 532 RIMDREATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGL-LDGCALGITNLREAYYFSLETMTTVGYGT--QDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMPP 1329
R +DR+ + QS G +N+ R+G + +Y D FHT+IN +S ++L + + Y I+ FA Y+ I L C +G++++ +AY FSLET+ T+GYG D+FFGGC S+ ++T ++ G+++D+ IGI +AR +R RA T++FS +AVIR++RG +YF+ Q + RKHQL++AHVR Y +RH+ G ++ P FQ H MR+Q PDD+ G+ +L+VLPQ +VVHRID WSP+ PP
Sbjct: 29 RFLDRQGRFKQSLGHFNVN--RKG-GHWRRIYWDDPFHTVINTRSSRIILGIFIAYSFIILLFALAYMDISLRYPACHVGLSSITDAYVFSLETIMTIGYGAPMDDIFFGGCTSIATLLTFESFAGIILDSVCIGIFYARFARANQRANTIMFSNSAVIRKIRGHYYFMLQTC-ERRKHQLVEAHVRLYAVRHEV------------------GDDTDEPNETLFQCHQMRVQQPDDDCGAMLLMVLPQ-----VVVHRIDQWSPLFPP 270 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig741.1.1 >prot_P-wetherbeei_contig741.1.1 ID=prot_P-wetherbeei_contig741.1.1|Name=mRNA_P-wetherbeei_contig741.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=573bp GTVFLFQTRSRTTVCFISGCRVCRAVGAGCLQNKANLFSYLFHSQFLEGVback to top mRNA from alignment at P-wetherbeei_contig741:50..3408- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig741.1.1 ID=mRNA_P-wetherbeei_contig741.1.1|Name=mRNA_P-wetherbeei_contig741.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3359bp|location=Sequence derived from alignment at P-wetherbeei_contig741:50..3408- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig741:50..3408- >mRNA_P-wetherbeei_contig741.1.1 ID=mRNA_P-wetherbeei_contig741.1.1|Name=mRNA_P-wetherbeei_contig741.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1719bp|location=Sequence derived from alignment at P-wetherbeei_contig741:50..3408- (Phaeothamnion wetherbeei SAG_119_79)back to top |