mRNA_P-wetherbeei_contig741.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig741.1.1
Unique NamemRNA_P-wetherbeei_contig741.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A6H5K8M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M2_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 3.050e-91
Identity = 174/340 (51.18%), Postives = 212/340 (62.35%), Query Frame = 1
Query:  493 WTKFLHRSHLGYRRIMDREATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDGCALGITNLREAYYFSLETMTTVGYGTQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLL--PAASAPPGVDPEVFLRGQESGG---------------------------------PRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMPPPRWMSAQGVVQWGLHGDADYARAPWE 1407
            W K   +    YR ++DRE  Y QS GRWNI+R++   A ++ L   D FH+ +N  T  ++L ++  Y+S+V  FA  Y  I    GC L +T++RE + FSLETMTTVGYGT D  FG CW ML +++ QAC+GLLIDA LIGI+FARLSRPQTRA TVVF+K AVIRRVRGE YF+FQ +G+LRKHQLL+  VRCY +RH+RL   P  +       E    G  S                                   P  VFFQ+H+MRLQHPDDELG  +LLVLPQA     VVHRIDAWSPMMPPPRW S+ G VQWGLH D D  +APWE
Sbjct:   67 WLKARKKGEQAYR-LVDREGPYYQSVGRWNIRRLKTQ-ADVQKLIGLDPFHSFLNQSTLKIILRIIGLYLSLVFLFAIVYTTISHTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWVMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQ-IGELRKHQLLETRVRCYALRHERLTYNPCGNNNNVGSSESSGLGARSASVSSNIXXXXXXXXXXXXXXSTTVTSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQARGT--VVHRIDAWSPMMPPPRWNSSHGPVQWGLHTDKDIVKAPWE 401          
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A835YU47_9STRA (Inward rectifier potassium channel-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU47_9STRA)

HSP 1 Score: 287 bits (735), Expect = 3.540e-90
Identity = 155/280 (55.36%), Postives = 196/280 (70.00%), Query Frame = 1
Query:  421 RSSEKYGNIVFRHFWTSSTRHLETWTKFLHRSHLGYRRIMDREATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDGCALGITNLREAYYFSLETMTTVGYGTQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLV 1260
            RS +++G ++    W S    +   ++          R++DR + + QSFGRWNI R  +   G++ L+  D FHT+++M T  VL  L + Y+++VT FAA YLAI   DGC LGI + REAYYFSLETMTTVG+GTQDVFFG CWS++ +ITAQAC GLLIDA LIG++FARL RPQTRA+TVVFS  AV+RR+RGE+YF+FQ V +LRKHQLL+ HVRCY +RH R LP       +D    L   ES  P TV +QTHNMRLQHPDDELG +MLLV
Sbjct:    1 RSKKRFGFLLGLRAWRSKAEPMPQRSQ----------RLIDRSSHFQQSFGRWNIGRNTKD-EGMRKLFSNDWFHTVLHMTTWKVLGALFLTYLAVVTVFAALYLAIARFDGCNLGIVDYREAYYFSLETMTTVGFGTQDVFFGRCWSVMVIITAQACSGLLIDALLIGLLFARLGRPQTRASTVVFSDKAVLRRIRGEYYFMFQ-VAELRKHQLLETHVRCYAVRHHRTLP-------IDANGAL--DESQPPETVHYQTHNMRLQHPDDELGGSMLLV 259          
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A836CL18_9STRA (Inward rectifier potassium channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL18_9STRA)

HSP 1 Score: 286 bits (732), Expect = 9.630e-90
Identity = 150/257 (58.37%), Postives = 185/257 (71.98%), Query Frame = 1
Query:  544 REATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDGCALGITNLREAYYFSLETMTTVGYGTQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWS 1314
            R++TY QS+GRWNI R  +    I+ L+  D+FHT+++M T  VL  L   Y+ +V+ FA  YL I   DGC +GI + REAYYFSLETMTTVGYGTQDVFFG CWS++ +ITAQAC GLLIDA LIG++FARL+RPQTRA+TVVFS  AV+RR+RGE+YF+FQ VG+LRKHQLL+  VRCY +RH R LP       +D    L   ++  P TV +QTHNMRLQHPDDELG A+LLVLPQ      V  +   WS
Sbjct:    7 RDSTYHQSYGRWNIDRNTKD-DHIRTLFNNDRFHTVLHMTTWKVLSYLFFAYLVVVSTFALIYLIISHFDGCNMGIVDYREAYYFSLETMTTVGYGTQDVFFGRCWSVMVIITAQACCGLLIDALLIGVLFARLARPQTRASTVVFSNKAVLRRIRGEYYFMFQ-VGELRKHQLLETKVRCYAVRHHRTLP-------IDAAGCL--DDANPPETVHYQTHNMRLQHPDDELGGALLLVLPQVRARVAVFQKYAIWS 252          
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A7S2JZ67_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZ67_9STRA)

HSP 1 Score: 219 bits (557), Expect = 5.850e-61
Identity = 129/312 (41.35%), Postives = 173/312 (55.45%), Query Frame = 1
Query:  523 GYRRIMDREATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDG-------------------------CALGITNLREAYYFSLETMTTVGYGTQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGG--------PRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMPPPRWMSAQGVV 1359
            G  R++DR A Y QS G W I R       +   + QD FHTI+N+ T  +  I+ V Y+ IVTGFA  YL I  ++                          C + I N  EA YFS+ TMTT+GYG  D +FG CW+    +  Q    L  +A  IG+IF RLSR Q RA TVVFS  A+IRR++G+ YF+FQ + +LRKHQL++AHVR Y +RH+R    ++       +V +R + S          P T +FQTH MRLQHPDD LG  +L+ LP      +VVHR+D +SP+MPP +W  A G +
Sbjct:   58 GNTRMLDRSAGYHQSRGEWRIHRKIPDKFHV--YWFQDVFHTILNLPTWRIFAIMFVAYLCIVTGFALLYLLIAKVNMYVVDVPINGSSDEASTGENSVTKSYCGMDIDNFSEAMYFSISTMTTIGYGISDYYFGDCWTPFAAVFMQVFTALTFNAVAIGVIFQRLSRGQNRATTVVFSDKAIIRRIKGKLYFMFQ-LCELRKHQLVEAHVRVYCVRHEREHKESN-------DVEMRKESSSXXXVDEEEEPDTCYFQTHAMRLQHPDDALGGFLLMALPN-----VVVHRLDKFSPLMPPAKWTDASGQI 354          
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A6G0WDP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDP0_9STRA)

HSP 1 Score: 211 bits (538), Expect = 4.550e-59
Identity = 120/275 (43.64%), Postives = 168/275 (61.09%), Query Frame = 1
Query:  526 YRRIMDREATYSQ-----SFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDG-CALGITNLREAYYFSLETMTTVGYG--TQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMP 1326
            Y RI+DR+  Y       + G +NIKR        K +Y  D FHTIIN  T+ V++ + V Y  ++  FA CY  I + D  C +GI+ L EAY FS+ET+ T+GYG  T D+F+GGC SM  ++T ++  G+ +DA  IG+ F R SR  TRA +++FS  AVIR++RG++YF+FQ V + RKHQL +AHVRCY +RH+           + P+         G     FQTH+MR+Q PDD++G+ +L+ LPQ     +VVHRID WSPM P
Sbjct:   36 YARILDRDGYYDHDGVPTTTGSYNIKRTG---GNWKKIYWDDLFHTIINTRTTRVIVGVFVAYAIVIFLFALCYRYISVNDPRCNVGISTLMEAYIFSVETIMTIGYGAPTNDIFYGGCGSMAVILTLESFSGIFLDAVCIGMFFVRFSRATTRACSIIFSNYAVIRKIRGDYYFMFQ-VCERRKHQLAEAHVRCYAVRHE-----------ISPD---------GTEEALFQTHHMRIQQPDDDIGAFLLMALPQ-----VVVHRIDQWSPMFP 281          
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: T0R5G6_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R5G6_SAPDV)

HSP 1 Score: 206 bits (525), Expect = 2.090e-57
Identity = 116/257 (45.14%), Postives = 163/257 (63.42%), Query Frame = 1
Query:  565 SFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDG-CALGITNLREAYYFSLETMTTVGYG--TQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMP 1326
            SFG++NI+RV       + +Y  D +HT+IN  T  ++  + V Y  ++  FA  Y  + L D  C +GIT+L EAY FS+ET+ T+GYG  + D+F+GGC SM F++T ++  G+ +D+ LIG+ F R SR  TRA ++VFSK AVIR++RG +Y +FQ V + RKHQL++AHVRCY IRH+       AP G +                 FQTH+MRLQ PDD++G+ +L+ LPQ     LVVHRID WSP+ P
Sbjct:   46 SFGKYNIERVG---GSWRQIYWDDLYHTVINTRTVRLVTAVFVVYAFVIFFFALAYQTVSLKDPECHVGITSLTEAYIFSVETIMTIGYGAPSDDIFYGGCGSMAFLLTMESFAGIFLDSILIGMFFVRFSRADTRALSIVFSKDAVIRKIRGSYYLMFQ-VCERRKHQLVEAHVRCYGIRHE------IAPDGTE--------------EALFQTHHMRLQQPDDDIGAYLLMALPQ-----LVVHRIDQWSPLFP 273          
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A1W0A2N1_9STRA (Inward rectifier K channel (IRK-C) family protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2N1_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.630e-57
Identity = 118/257 (45.91%), Postives = 164/257 (63.81%), Query Frame = 1
Query:  565 SFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDG-CALGITNLREAYYFSLETMTTVGYG--TQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMP 1326
            SFG +NI+RV       + +Y  D FHT+IN  TS ++  + V Y  ++  FA  Y  I   D  C +GI +L EAY FS+ET+ T+GYG  + D+F+GGC SM F++T ++  G+ +D+ LIG+ F R SR  TRA ++VFSK AVIR++RG +YF+FQ V + RKHQL++AHVRCY IR+               EV   G E      +FFQTH+MRLQ PDD++G+ +L+ LPQ     +V+HRIDAWSP+ P
Sbjct:   43 SFGIYNIQRVG---GAWRKIYWDDMFHTVINTRTSRLVTAVFVVYALVIFFFAIAYQTISEKDPECHVGIKSLTEAYIFSVETIMTIGYGAPSDDIFYGGCSSMAFLLTMESFSGIFLDSILIGMFFVRFSRADTRAYSIVFSKDAVIRKIRGHYYFMFQ-VCERRKHQLVEAHVRCYGIRN---------------EVSADGDEG-----LFFQTHHMRLQQPDDDIGAYLLMALPQ-----IVIHRIDAWSPLFP 270          
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A8K1CKD0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKD0_PYTOL)

HSP 1 Score: 202 bits (514), Expect = 6.510e-56
Identity = 114/269 (42.38%), Postives = 164/269 (60.97%), Query Frame = 1
Query:  532 RIMDREATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGL-LDGCALGITNLREAYYFSLETMTTVGYG--TQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMPP 1329
            R +DRE  + QS GR+NIKRV       + +Y  D FHT+IN  TS +   + + Y  ++  FA  YL I +    C +GI  L EAY FSLET+ T+GYG  T D+F+GGC +M  ++T ++  G+ +D+  IG+ +AR +R   RA TV+FS TAVIR++RGE+YF+ Q V + RKHQL++AHVR Y +RH  +L    +P                   + +Q+H MR+Q PDD+ G+ +L+ LPQ     ++VHRID WSP+ PP
Sbjct:   16 RFLDREGRFRQSMGRYNIKRVG---GDWRRIYTDDLFHTVINTRTSRIATGIFLAYALVIFFFALAYLDISMNRQECHVGIKTLMEAYIFSLETIMTIGYGAPTNDIFYGGCSTMAVLLTLESFAGIFLDSICIGMFYARFARANKRAQTVMFSNTAVIRKIRGEYYFMLQ-VCERRKHQLVEAHVRLYAMRH--VLAHDGSP------------------DMLYQSHQMRVQQPDDDTGAMLLIALPQ-----VIVHRIDPWSPLFPP 255          
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A024TD03_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TD03_9STRA)

HSP 1 Score: 199 bits (507), Expect = 5.040e-55
Identity = 109/255 (42.75%), Postives = 156/255 (61.18%), Query Frame = 1
Query:  571 GRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLLDG-CALGITNLREAYYFSLETMTTVGYG--TQDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMP 1326
            G +NI+R        + +Y  D FHTIIN  TS V+  +   Y  ++  FA CY  + + D  C +G+T + EAY FS+ET+ T+GYG  + D+F+GGC SM  ++T ++  G+ +DA  IG+ F R SR  TRA +++FS  AVIR++RG++YF+FQ V + RKHQL +AHVRCY +RH+                F   ++     T  FQTH+MRLQ PDD++G+ +L+ LPQ     +VVHRID WSP  P
Sbjct:   54 GSYNIRRTG---GNWRKIYWDDLFHTIINTRTSRVIAGVFGAYAIVIFLFALCYRYVSVNDPTCNVGVTTIMEAYIFSVETIMTIGYGAPSNDIFYGGCGSMAVILTLESFSGIFLDAVCIGMFFVRFSRATTRACSIIFSNFAVIRKIRGDYYFMFQ-VCERRKHQLAEAHVRCYAVRHE----------------FDVSKDGVAEETALFQTHHMRLQQPDDDIGAFLLMALPQ-----VVVHRIDPWSPFFP 283          
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Match: A0A0P1B7L9_PLAHL (Animal inward rectifier k channel (Irk-c) family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7L9_PLAHL)

HSP 1 Score: 200 bits (509), Expect = 5.200e-55
Identity = 108/269 (40.15%), Postives = 165/269 (61.34%), Query Frame = 1
Query:  532 RIMDREATYSQSFGRWNIKRVREGVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGL-LDGCALGITNLREAYYFSLETMTTVGYGT--QDVFFGGCWSMLFVITAQACVGLLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDLRKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQTHNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMPP 1329
            R +DR+  + QS G +N+   R+G    + +Y  D FHT+IN  +S ++L + + Y  I+  FA  Y+ I L    C +G++++ +AY FSLET+ T+GYG    D+FFGGC S+  ++T ++  G+++D+  IGI +AR +R   RA T++FS +AVIR++RG +YF+ Q   + RKHQL++AHVR Y +RH+                   G ++  P    FQ H MR+Q PDD+ G+ +L+VLPQ     +VVHRID WSP+ PP
Sbjct:   29 RFLDRQGRFKQSLGHFNVN--RKG-GHWRRIYWDDPFHTVINTRSSRIILGIFIAYSFIILLFALAYMDISLRYPACHVGLSSITDAYVFSLETIMTIGYGAPMDDIFFGGCTSIATLLTFESFAGIILDSVCIGIFYARFARANQRANTIMFSNSAVIRKIRGHYYFMLQTC-ERRKHQLVEAHVRLYAVRHEV------------------GDDTDEPNETLFQCHQMRVQQPDDDCGAMLLMVLPQ-----VVVHRIDQWSPLFPP 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig741.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8M2_9PHAE3.050e-9151.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YU47_9STRA3.540e-9055.36Inward rectifier potassium channel-domain-containi... [more]
A0A836CL18_9STRA9.630e-9058.37Inward rectifier potassium channel-domain-containi... [more]
A0A7S2JZ67_9STRA5.850e-6141.35Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A6G0WDP0_9STRA4.550e-5943.64Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
T0R5G6_SAPDV2.090e-5745.14Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1W0A2N1_9STRA2.630e-5745.91Inward rectifier K channel (IRK-C) family protein ... [more]
A0A8K1CKD0_PYTOL6.510e-5642.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TD03_9STRA5.040e-5542.75Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
A0A0P1B7L9_PLAHL5.200e-5540.15Animal inward rectifier k channel (Irk-c) family p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig741contigP-wetherbeei_contig741:50..3408 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008605349.1
PFAMsIRK
Model size1720
Max annot lvl2759|Eukaryota
KEGG koko:K05005,ko:K05330
KEGG TC1.A.2.1.14,1.A.2.1.15,1.A.2.1.9
KEGG Pathwayko04725,ko04921,map04725,map04921
Hectar predicted targeting categorymitochondrion
Exons6
Evalue3.43e-58
EggNOG OGsKOG3827@1|root,KOG3827@2759|Eukaryota
Descriptioninward rectifier potassium channel activity
Cds size1719
COG categoryP
BRITEko00000,ko00001,ko04040
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig741.1.1prot_P-wetherbeei_contig741.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig741 50..3408 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186979.538506-CDS-P-wetherbeei_contig741:49..4841683186979.538506-CDS-P-wetherbeei_contig741:49..484Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig741 50..484 -
1683186979.5511148-CDS-P-wetherbeei_contig741:694..9421683186979.5511148-CDS-P-wetherbeei_contig741:694..942Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig741 695..942 -
1683186979.5620036-CDS-P-wetherbeei_contig741:1276..14241683186979.5620036-CDS-P-wetherbeei_contig741:1276..1424Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig741 1277..1424 -
1683186979.5732005-CDS-P-wetherbeei_contig741:1854..19131683186979.5732005-CDS-P-wetherbeei_contig741:1854..1913Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig741 1855..1913 -
1683186979.5837653-CDS-P-wetherbeei_contig741:2414..25281683186979.5837653-CDS-P-wetherbeei_contig741:2414..2528Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig741 2415..2528 -
1683186979.5974207-CDS-P-wetherbeei_contig741:2693..34081683186979.5974207-CDS-P-wetherbeei_contig741:2693..3408Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig741 2694..3408 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig741.1.1

>prot_P-wetherbeei_contig741.1.1 ID=prot_P-wetherbeei_contig741.1.1|Name=mRNA_P-wetherbeei_contig741.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=573bp
GTVFLFQTRSRTTVCFISGCRVCRAVGAGCLQNKANLFSYLFHSQFLEGV
FRYLSAACVLATDAAYSSSLAIPDVSDLVVTPGEKNMNRRAVGSSNSASS
LLSNSKRSGNLYLSVNDQSPNRFPSSPSGDDLGSLEEGGRRSSEKYGNIV
FRHFWTSSTRHLETWTKFLHRSHLGYRRIMDREATYSQSFGRWNIKRVRE
GVAGIKNLYEQDQFHTIINMDTSLVLLILLVGYISIVTGFAACYLAIGLL
DGCALGITNLREAYYFSLETMTTVGYGTQDVFFGGCWSMLFVITAQACVG
LLIDAALIGIIFARLSRPQTRAATVVFSKTAVIRRVRGEFYFLFQAVGDL
RKHQLLDAHVRCYVIRHDRLLPAASAPPGVDPEVFLRGQESGGPRTVFFQ
THNMRLQHPDDELGSAMLLVLPQASFDPLVVHRIDAWSPMMPPPRWMSAQ
GVVQWGLHGDADYARAPWERRAAASDAVDRDRIGAEVATTDAVAAEPVGE
VTPAAAAGAGAPAAGAASEAMARAGAGSVPPKTTVTAGVGLLGARAGRLH
SVGEDTDPGEAAASAVSATEAGQ
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mRNA from alignment at P-wetherbeei_contig741:50..3408-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig741.1.1 ID=mRNA_P-wetherbeei_contig741.1.1|Name=mRNA_P-wetherbeei_contig741.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3359bp|location=Sequence derived from alignment at P-wetherbeei_contig741:50..3408- (Phaeothamnion wetherbeei SAG_119_79)
GGCACTGTTTTCTTGTTTCAGACGCGGTCCCGGACGACCGTTTGCTTTAT CAGCGGGTGCCGGGTATGCCGGGCAGTGGGTGCGGGATGCCTCCAAAACA AAGCGAATCTTTTTTCGTATCTTTTTCATTCGCAGTTTTTGGAAGGAGTC TTTCGTTATTTGAGTGCTGCATGCGTCCTTGCCACCGACGCGGCTTATTC TTCGTCCTTGGCGATACCAGACGTGAGCGATTTGGTCGTGACTCCAGGGG AGAAGAACATGAATCGGAGGGCAGTAGGAAGCAGTAACAGCGCTTCCTCG CTGCTTTCAAACAGCAAGCGCTCGGGCAACCTCTATCTTTCGGTGAACGA TCAATCTCCGAACCGATTCCCTTCGTCGCCTTCGGGAGATGACCTTGGCT CCCTCGAGGAAGGGGGCAGGAGATCGTCTGAGAAGTACGGCAACATCGTC TTTCGCCACTTCTGGACCTCGTCGACCCGCCATCTTGAGACATGGACTAA GTTTCTTCACCGATCGCACCTTGGCTATCGCCGCATTATGGATCGCGAAG CGACCTACTCGCAATCGTTCGGGCGCTGGAACATCAAGCGGGTCCGCGAA GGCGTCGCCGGCATCAAGAATCTGTACGAGCAGGACCAGTTCCACACGAT AATCAACATGGACACGTCGCTGGTTCTTCTCATTCTGCTTGTCGGCTACA TCTCCATCGTCACGGGTACGCCGAGTTTCTCTGCTTCTCTTTGCCAACAT CTGCCTTTTTCAGTCCCTGCGCTGCACTCTGCCTGGTAAAAAAGCCTTCA AATACTTACTTTCTGGCGAAATATCATCCAAAACGATAACGGCCGGAAAC ACAAACAATAACACAACAAAACACAAATAGGGTTCGCGGCGTGCTATCTG GCCATCGGGCTGCTGGACGGCTGCGCGCTCGGCATCACCAATCTGCGGGA GGCCTACTACTTCTCGCTCGAGACCATGACCACTGTCGGCTACGGTGAGC CTAGCACCCTCCGTTCTTCAGATTCTCTTCTAGTTTGGTGCAGTTTACAG ATGTTTCGGGGTTTTTTAATGGGCAAGCGTGTTTTACTCTTTAGCGATCT GCTTGAATAGATGCTAGTAAGGGAAGAACAAGTCTCCAAACCAAACAGCT GTGACTCTGGGGACAGAGTGCACGATCGCAGTGGGTTGCTCGCCACGGCG TGCGCCTGTGTCGCTTCACTTATTGTAGCGCAAAATCACCGTTCCTTGCG CCTGTTTGTCTCGGCTGGTCTATCTCGTCTTCCATACTCCGCTCTGCTTG GGTTGGTTGCCGAGGGCGGCCTTGGATGACTGCGGCGCAACCGCCTGGGC GGCTGGCTGCATGCGCGAACCGCCTGGGCGGCTGGCTGCATGCGCGAAAA CCGCTCTGGCGATGATGGCTCTGCTGTCTTCGCGACGGTGGCGGCGGCTG CCTTGGTGACGGTGGCGGGACTGCAATGTGCTCTGAGGGGCGCAGGGACG CAAGACGTCTTCTTTGGAGGGTGCTGGTCGATGCTCTTCGTCATCACGGC GCAGGTGTGTGGCAGGCGACGGGACTGGCCGGGTGGAAGCTGCCGTGACG ATGCAGTGGACTGCTGGCGCTTCCACCGGCTCCGGCTTCTTTTCCGCCCA GGAGAATGGAATCCCTACAACTAGTTTATTGGACGGCGCTAGGTATTTGT CGGCTGGACGGGTTAGTCTTGGAAACAGGAGTTGGTGTTCTCGTTGCTCA ATGCATGGGGTTGCGTTGTTTCCTCGGACGTCGCTCTTTCCACCATCCTC TCCCATCTGGCTGCGTCCTCTACTGCCGCCGGCGTGCCATCGACGATATG CATCGTGGCGTGCCGGCTTGCCGGCAACTGTCCTCGTCGCCGGAACTTTT AAAACTGTGAAAATGGGGTCGACATTTGGCGGCGTCTGGCGGCGTTGGCG ATGGTGATGGCGGCCGCGGCGTGGGTTGCAACAGGCGTGCGTCGGCCTGC TGATCGATGCGGCACTCATCGGCATCATCTTCGCGCGGCTCAGCCGGCCT CAGACGCGCGCTGCGACCGTCGTTTTCAGCAAGACCGCTGTCATCCGGCG CGTCCGCGGCGAATTCTATTTCCTCTTCCAGGGTGCGTCCTTTTTCTCTA TCTTTATGCCAGCATGCGTCGCCCCGTTTTCCGGAGAGGTACGGCACTGC AACGACGGCACCTTCTCTCATTTATTATCGATCGATCATGGCACAGGAAA GGCTCCCTTGCAATGCAGCAGCCGCACTTGATGCCCCTGCTGATCCCGCC GCTATCACTGCCGCAATCCCCGTCCCTGATGAGCCGATTCCGGAACTGCG CGCTGCGGTTCGAAACCTTGGAAACGAAGGCCAAACGAATCGAACACAAA AACATCAAAGGCCAAACATATTCAATGCCAAATCTCACACCGCCAAATCC CAACGCCAAATCTGAGCAGTCGGCGACCTCCGGAAGCACCAGCTGCTGGA CGCGCACGTCCGGTGCTACGTGATTCGCCACGACCGGCTGCTGCCGGCGG CGTCGGCGCCGCCAGGCGTCGATCCGGAGGTGTTTCTGCGTGGGCAGGAG AGCGGCGGGCCGAGGACAGTCTTCTTTCAGACGCACAACATGCGGTTGCA GCACCCCGACGACGAGCTGGGCAGCGCCATGCTGCTCGTCCTGCCGCAGG CGAGTTTCGACCCCGTTCCAATCGGTTTGTTTGGAGTGATATTTGTTTTC TTCCTGTTTACCTTCCTTCAGGTAGCGTCTGCTTTCTTTTCGTTAGGGTG GTGATGACGTAGGCGCACGTTCTGATCCGTTGCGCCCCATGCGTGCCTCC CGCATTCCTCTCCCTTATTCCATTCCTGCTGCCCCGCCATCATATGCCGG AAACCCCCGGTGAAAAAACAATAGTTGGTGGTGCATCGCATCGACGCGTG GTCCCCCATGATGCCACCTCCCCGCTGGATGAGCGCCCAGGGCGTCGTGC AGTGGGGCCTCCACGGCGACGCCGACTACGCCCGCGCCCCCTGGGAACGC CGCGCCGCCGCCTCCGACGCAGTCGACCGCGACCGCATCGGCGCTGAGGT CGCCACCACCGATGCTGTGGCAGCCGAACCCGTGGGAGAAGTAACACCGG CTGCAGCGGCGGGAGCGGGAGCGCCGGCGGCGGGCGCCGCATCAGAGGCA ATGGCCAGGGCTGGGGCAGGGTCAGTGCCGCCAAAGACAACGGTGACGGC CGGCGTCGGCCTGCTGGGCGCGCGCGCCGGCCGGCTGCACTCGGTCGGAG AGGACACCGACCCCGGCGAGGCGGCGGCGTCGGCCGTGTCGGCCACGGAG GCTGGGCAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig741:50..3408-

>mRNA_P-wetherbeei_contig741.1.1 ID=mRNA_P-wetherbeei_contig741.1.1|Name=mRNA_P-wetherbeei_contig741.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1719bp|location=Sequence derived from alignment at P-wetherbeei_contig741:50..3408- (Phaeothamnion wetherbeei SAG_119_79)
GGCACTGTTTTCTTGTTTCAGACGCGGTCCCGGACGACCGTTTGCTTTAT
CAGCGGGTGCCGGGTATGCCGGGCAGTGGGTGCGGGATGCCTCCAAAACA
AAGCGAATCTTTTTTCGTATCTTTTTCATTCGCAGTTTTTGGAAGGAGTC
TTTCGTTATTTGAGTGCTGCATGCGTCCTTGCCACCGACGCGGCTTATTC
TTCGTCCTTGGCGATACCAGACGTGAGCGATTTGGTCGTGACTCCAGGGG
AGAAGAACATGAATCGGAGGGCAGTAGGAAGCAGTAACAGCGCTTCCTCG
CTGCTTTCAAACAGCAAGCGCTCGGGCAACCTCTATCTTTCGGTGAACGA
TCAATCTCCGAACCGATTCCCTTCGTCGCCTTCGGGAGATGACCTTGGCT
CCCTCGAGGAAGGGGGCAGGAGATCGTCTGAGAAGTACGGCAACATCGTC
TTTCGCCACTTCTGGACCTCGTCGACCCGCCATCTTGAGACATGGACTAA
GTTTCTTCACCGATCGCACCTTGGCTATCGCCGCATTATGGATCGCGAAG
CGACCTACTCGCAATCGTTCGGGCGCTGGAACATCAAGCGGGTCCGCGAA
GGCGTCGCCGGCATCAAGAATCTGTACGAGCAGGACCAGTTCCACACGAT
AATCAACATGGACACGTCGCTGGTTCTTCTCATTCTGCTTGTCGGCTACA
TCTCCATCGTCACGGGGTTCGCGGCGTGCTATCTGGCCATCGGGCTGCTG
GACGGCTGCGCGCTCGGCATCACCAATCTGCGGGAGGCCTACTACTTCTC
GCTCGAGACCATGACCACTGTCGGCTACGGGACGCAAGACGTCTTCTTTG
GAGGGTGCTGGTCGATGCTCTTCGTCATCACGGCGCAGGCGTGCGTCGGC
CTGCTGATCGATGCGGCACTCATCGGCATCATCTTCGCGCGGCTCAGCCG
GCCTCAGACGCGCGCTGCGACCGTCGTTTTCAGCAAGACCGCTGTCATCC
GGCGCGTCCGCGGCGAATTCTATTTCCTCTTCCAGGCAGTCGGCGACCTC
CGGAAGCACCAGCTGCTGGACGCGCACGTCCGGTGCTACGTGATTCGCCA
CGACCGGCTGCTGCCGGCGGCGTCGGCGCCGCCAGGCGTCGATCCGGAGG
TGTTTCTGCGTGGGCAGGAGAGCGGCGGGCCGAGGACAGTCTTCTTTCAG
ACGCACAACATGCGGTTGCAGCACCCCGACGACGAGCTGGGCAGCGCCAT
GCTGCTCGTCCTGCCGCAGGCGAGTTTCGACCCCTTGGTGGTGCATCGCA
TCGACGCGTGGTCCCCCATGATGCCACCTCCCCGCTGGATGAGCGCCCAG
GGCGTCGTGCAGTGGGGCCTCCACGGCGACGCCGACTACGCCCGCGCCCC
CTGGGAACGCCGCGCCGCCGCCTCCGACGCAGTCGACCGCGACCGCATCG
GCGCTGAGGTCGCCACCACCGATGCTGTGGCAGCCGAACCCGTGGGAGAA
GTAACACCGGCTGCAGCGGCGGGAGCGGGAGCGCCGGCGGCGGGCGCCGC
ATCAGAGGCAATGGCCAGGGCTGGGGCAGGGTCAGTGCCGCCAAAGACAA
CGGTGACGGCCGGCGTCGGCCTGCTGGGCGCGCGCGCCGGCCGGCTGCAC
TCGGTCGGAGAGGACACCGACCCCGGCGAGGCGGCGGCGTCGGCCGTGTC
GGCCACGGAGGCTGGGCAA
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