prot_P-wetherbeei_contig7405.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7405.1.1
Unique Nameprot_P-wetherbeei_contig7405.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length288
Homology
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BLAST of mRNA_P-wetherbeei_contig7405.1.1 vs. uniprot
Match: D7G0W8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0W8_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 8.360e-37
Identity = 97/285 (34.04%), Postives = 139/285 (48.77%), Query Frame = 0 
Query:    1 MSDAKPKSPRSHSRTRSGSKSPLSRIRSKSSLKVDTESEKKSFFGFGKSISPRSSSDAKSESKEKPAAAPSATGAGTTSPSXXXXXXXXXXXXPMRLFRRS--KPVAVQSNFFRDRLPLTLSALLATALAAVAVSFFYGPGEGPRLLKRDAPLYDGDVLRQNEYINTCAGFISFGCEPRYFELSADGELGLYEGAGPVLPSGGGLFGRVGXXXXXXXXXXXXDGEETVVAKRLWGSGTRVRGRRGVEATFSAEYKDGALVLLRDGKVAWKSPVSRLPRDMQPWPL 283
            MS  +PK+ RS  R++S ++SPL+R  SK++L +DT++   +       ISP   S             P   G     PS            P ++  R   K  ++ S +F   LP  LSA+L+    AVA + F+G G+GP+L+KRDAPL+ GD L+  +YI+ C   I+ GC+P+YFEL  DG LG+Y G  P                                  +LW +GT  +G  G EA +   Y    +VL +DGKV W S V  LP++M+PWPL
Sbjct:    1 MSTIEPKAVRS--RSKSPTRSPLARTASKTNLVIDTQAGHDAADKGEPLISPARFS-------------PITAGKRLLKPSS-----------PRKITMRPVVKEESMLSRYFSQSLPAKLSAVLSVVAIAVAAALFFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSLGVYGGKSPYAQKA-----------------------------KLWTAGTGAKGGGGKEAFYELVYTGDRVVLNKDGKVKWSSSVKSLPKNMRPWPL 230
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BLAST of mRNA_P-wetherbeei_contig7405.1.1 vs. uniprot
Match: A0A836CBU0_9STRA (Plastocyanin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU0_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 8.090e-19
Identity = 63/187 (33.69%), Postives = 90/187 (48.13%), Query Frame = 0 
Query:  113 DRLPLTLSALLATALAAVAVSFFY---GPGEGPRLLKRDAPLYDGDVLRQNEYINTCAGFISF--GCEPRYFELSADGELGLYEGAGPVLPSGGGLFGRVGXXXXXXXXXXXXDGEETVVAKRLWGSGTRVRG---RRGVEATFS-------AEYKDGALVLLRDGKVAWKSPVSRLPRDMQP-WPL 283
            +RL + L  ++   L  VAV+ +Y   GP   PRL++RDAPL DGDVL+  EY+ TC G  +    C P YFELS +GELGL+ G GP+                           +   A++LW SG+  +    +R  ++T         A Y  G L + R  +V W +   RLP  ++  WPL
Sbjct:   23 ERLAVVLGNIVGVLLLLVAVALYYVPPGPAGAPRLIRRDAPLVDGDVLKAGEYMTTCTGITAMVTNCTPMYFELSPNGELGLFRGKGPL---------------------------DDPPAQKLWASGSAAKPSKKKRFAKSTAEQPLLLPRALYAAGQLTVKRGDEVVWAAAAERLPEALRGGWPL 182
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7405.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0W8_ECTSI8.360e-3734.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBU0_9STRA8.090e-1933.69Plastocyanin-like domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7405contigP-wetherbeei_contig7405:72..1835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7405.1.1mRNA_P-wetherbeei_contig7405.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7405 13..2364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7405.1.1 ID=prot_P-wetherbeei_contig7405.1.1|Name=mRNA_P-wetherbeei_contig7405.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=288bp
MSDAKPKSPRSHSRTRSGSKSPLSRIRSKSSLKVDTESEKKSFFGFGKSI
SPRSSSDAKSESKEKPAAAPSATGAGTTSPSSPTSPSSGSPRSPMRLFRR
SKPVAVQSNFFRDRLPLTLSALLATALAAVAVSFFYGPGEGPRLLKRDAP
LYDGDVLRQNEYINTCAGFISFGCEPRYFELSADGELGLYEGAGPVLPSG
GGLFGRVGGGGGGGEDTAGGDGEETVVAKRLWGSGTRVRGRRGVEATFSA
EYKDGALVLLRDGKVAWKSPVSRLPRDMQPWPLHAAV*
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