mRNA_P-wetherbeei_contig7221.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Match: A0A836CD21_9STRA (ARL1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD21_9STRA) HSP 1 Score: 134 bits (336), Expect = 4.730e-38 Identity = 65/81 (80.25%), Postives = 74/81 (91.36%), Query Frame = 1
Query: 1 LSAQELTAMLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGES 243
++ QEL AMLEEEELK+AILLVFANKQDQ G+L A QVSEA+GL E+RSRQW+IQEASA+KGKGLFEGFDWLVTCIKGG +
Sbjct: 104 IAKQELAAMLEEEELKDAILLVFANKQDQPGSLKATQVSEALGLPELRSRQWTIQEASAVKGKGLFEGFDWLVTCIKGGNA 184
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Match: D7G8D7_ECTSI (ARL1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D7_ECTSI) HSP 1 Score: 134 bits (336), Expect = 4.730e-38 Identity = 65/81 (80.25%), Postives = 75/81 (92.59%), Query Frame = 1
Query: 1 LSAQELTAMLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGES 243
++ QEL AMLEEEELK+AILLVFANKQDQ G+L + +VSEA+GL +IR+RQWSIQEASALKGKGLFEGFDWLVTCIKGGE+
Sbjct: 104 IAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRNRQWSIQEASALKGKGLFEGFDWLVTCIKGGEA 184
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Match: A0A6S9DTD2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DTD2_HETAK) HSP 1 Score: 132 bits (333), Expect = 1.310e-37 Identity = 63/75 (84.00%), Postives = 73/75 (97.33%), Query Frame = 1
Query: 10 QELTAMLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASALKGKGLFEGFDWLVTCIKG 234
QEL+AMLEEE+L++AILLVFANKQDQ+GALNAAQ+SE++GLSEIR+RQWSIQE SALKG GL+EGFDWLVTCIKG
Sbjct: 107 QELSAMLEEEDLRDAILLVFANKQDQRGALNAAQISESLGLSEIRNRQWSIQETSALKGNGLYEGFDWLVTCIKG 181
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Match: A0A7S3PDY2_9STRA (Hypothetical protein n=3 Tax=Labyrinthulomycetes TaxID=35131 RepID=A0A7S3PDY2_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.140e-36 Identity = 63/81 (77.78%), Postives = 73/81 (90.12%), Query Frame = 1
Query: 1 LSAQELTAMLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGES 243
++ QEL AMLEEEELK++ILLVFANKQD KGALNAAQVSE +GL+ I++RQWSIQE SA KG+GLFEGFDWLVTCIK G+S
Sbjct: 103 IAKQELMAMLEEEELKDSILLVFANKQDMKGALNAAQVSEHLGLATIKNRQWSIQETSATKGRGLFEGFDWLVTCIKSGQS 183
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Match: A0A1E7FFD0_9STRA (Arl1-family small GTPase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFD0_9STRA) HSP 1 Score: 129 bits (323), Expect = 4.420e-36 Identity = 61/74 (82.43%), Postives = 70/74 (94.59%), Query Frame = 1
Query: 13 ELTAMLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASALKGKGLFEGFDWLVTCIKG 234
EL AMLEE+ELK++ILLVFANKQDQKGA+NA Q+S+A+GL +IR+RQWSIQE SALKGKGLFEGFDWLVTCIKG
Sbjct: 108 ELAAMLEEDELKDSILLVFANKQDQKGAMNAQQISDALGLPDIRNRQWSIQETSALKGKGLFEGFDWLVTCIKG 181
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Match: W7TR65_9STRA (Adp-ribosylation factor 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR65_9STRA) HSP 1 Score: 128 bits (322), Expect = 7.200e-36 Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = 1
Query: 1 LSAQELTAMLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGES 243
++ QEL AMLEEEEL+E+ILLVFANKQDQKGALNA+Q+SEA+GLS +RSRQWSIQE SA KGKGLFEGFDWL T I GG +
Sbjct: 107 IAKQELCAMLEEEELRESILLVFANKQDQKGALNASQISEALGLSNLRSRQWSIQETSATKGKGLFEGFDWLSTAILGGNT 187
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Match: A0A7S3DQ25_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQ25_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.890e-35 Identity = 62/76 (81.58%), Postives = 71/76 (93.42%), Query Frame = 1
Query: 13 ELTAMLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGE 240
ELTAMLEEE+LK++ILLVFANKQDQKGALNA Q+S+A+GL E+R+RQWSIQE SALKGKG+FEGFDWLVT IKG E
Sbjct: 161 ELTAMLEEEDLKDSILLVFANKQDQKGALNAEQISDALGLPEVRNRQWSIQETSALKGKGMFEGFDWLVTSIKGEE 236
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Match: B8CE86_THAPS (Adp-ribosylation factor 1 n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8CE86_THAPS) HSP 1 Score: 126 bits (317), Expect = 3.680e-35 Identity = 61/76 (80.26%), Postives = 69/76 (90.79%), Query Frame = 1
Query: 13 ELTAMLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGE 240
EL AMLEEEEL+ +ILLVFANKQDQKGALNA Q+S+A+GL E+R+RQWSIQE SAL+GKGLFEGFDWLV CIKG E
Sbjct: 108 ELAAMLEEEELQNSILLVFANKQDQKGALNAQQISDALGLPEVRNRQWSIQETSALQGKGLFEGFDWLVACIKGVE 183
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Match: A0A6U1B3M7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B3M7_9STRA) HSP 1 Score: 124 bits (312), Expect = 4.740e-34 Identity = 61/78 (78.21%), Postives = 68/78 (87.18%), Query Frame = 1
Query: 10 QELTAMLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGES 243
QEL AMLEEEELK+AILL+FANKQDQKGAL A +SEA+ L+EIR+RQWSIQE ALKG GLFEGFDWLV CI GGE+
Sbjct: 138 QELQAMLEEEELKDAILLLFANKQDQKGALGAQDISEALKLTEIRNRQWSIQETCALKGNGLFEGFDWLVMCISGGEA 215
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Match: A0A7S2DEW5_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2DEW5_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.170e-33 Identity = 61/77 (79.22%), Postives = 67/77 (87.01%), Query Frame = 1
Query: 10 QELTAMLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGE 240
QEL AMLEEEELK++ILLVFANKQDQ GAL A VSEA+ L +IR+RQWSIQE ALKGKGLFEGFDWLV CIKGG+
Sbjct: 107 QELQAMLEEEELKDSILLVFANKQDQSGALGAQGVSEALRLPDIRNRQWSIQETCALKGKGLFEGFDWLVMCIKGGD 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7221.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7221.2.1 >prot_P-wetherbeei_contig7221.2.1 ID=prot_P-wetherbeei_contig7221.2.1|Name=mRNA_P-wetherbeei_contig7221.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=74bp MLEEEELKEAILLVFANKQDQKGALNAAQVSEAMGLSEIRSRQWSIQEASback to top mRNA from alignment at P-wetherbeei_contig7221:2075..3027- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7221.2.1 ID=mRNA_P-wetherbeei_contig7221.2.1|Name=mRNA_P-wetherbeei_contig7221.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=953bp|location=Sequence derived from alignment at P-wetherbeei_contig7221:2075..3027- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7221:2075..3027- >mRNA_P-wetherbeei_contig7221.2.1 ID=mRNA_P-wetherbeei_contig7221.2.1|Name=mRNA_P-wetherbeei_contig7221.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=222bp|location=Sequence derived from alignment at P-wetherbeei_contig7221:2075..3027- (Phaeothamnion wetherbeei SAG_119_79)back to top |