mRNA_P-wetherbeei_contig715.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Match: A0A835YSI8_9STRA (Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI8_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.190e-23 Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 1
Query: 97 VRMGFFGLGAPEIAVIVVVAAVILGPDKLTGLAKDVGKMAGELKEVPKEFQAGIEEGERT--TKVRKDDPAQVDDAE 321
V MG FGLGAPEIAVI+VVAA++LGP+KLT AKD GKMAGELKEVPKEFQAGI+EGE + T+++K + DAE
Sbjct: 66 VSMGLFGLGAPEIAVIIVVAALVLGPEKLTSFAKDAGKMAGELKEVPKEFQAGIDEGEASMKTQMKKAKQLEPQDAE 142
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Match: D7G5Q7_ECTSI (Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5Q7_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 4.190e-23 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 70 GASASGAGAVRMGFFGLGAPEIAVIVVVAAVILGPDKLTGLAKDVGKMAGELKEVPKEFQAGIEEGERTT 279
G +SGA MG FGLGAPEIAV + VAA+ILGPDK+ G AKD+GKMAGELK+VPKEFQAG+EEGE T
Sbjct: 72 GRPSSGASTTTMGLFGLGAPEIAVCIAVAALILGPDKMAGFAKDMGKMAGELKDVPKEFQAGVEEGEAKT 141
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Match: A0A7S2XUZ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUZ2_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 6.170e-21 Identity = 45/67 (67.16%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 85 GAGAVRMGFFGLGAPEIAVIVVVAAVILGPDKLTGLAKDVGKMAGELKEVPKEFQAGIEEGERTTKV 285
G +++MG FGLGAPEIAV V+VAA++LGPDKL A+DVGKMAGELKEVPKEFQ G+EEG+ ++
Sbjct: 61 GRSSIQMGLFGLGAPEIAVCVIVAALVLGPDKLISSARDVGKMAGELKEVPKEFQKGLEEGKEAARL 127
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Match: A0A7S4A8R7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8R7_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.080e-20 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 103 MGFFGLGAPEIAVIVVVAAVILGPDKLTGLAKDVGKMAGELKEVPKEFQAGIEEGERTTKVRKD 294
MG FGLGAPE+ +I+V AA +LGPDKL L KD GK+AGELKEVPKEFQAG+ EGE + K KD
Sbjct: 64 MGLFGLGAPEVGIILVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGLAEGEASAKAMKD 127
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Match: A0A7S2K8J1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8J1_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.750e-20 Identity = 49/76 (64.47%), Postives = 55/76 (72.37%), Query Frame = 1
Query: 64 PRGASASGAGAVRMGFFGLGAPEIAVIVVVAAVILGPDKLTGLAKDVGKMAGELKEVPKEFQAGIEEGERTTKVRK 291
PR +AS G FGLG PEIA+I+V AA +LGP+KL L KD GKMAGELKEVPKEFQAGIEEGE+ K K
Sbjct: 77 PRTCAASQRQTQLHGLFGLGGPEIAIILVAAAFLLGPEKLAELGKDAGKMAGELKEVPKEFQAGIEEGEKNAKAMK 152
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Match: A0A448ZFG6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFG6_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.620e-19 Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 103 MGFFGLGAPEIAVIVVVAAVILGPDKLTGLAKDVGKMAGELKEVPKEFQAGIEEGERTTKVRKD 294
MG FGLGAPEI +++V AA +LGPDKL L KD GK+AGELKEVPKEFQAG+ EGE + K K+
Sbjct: 61 MGLFGLGAPEIGIVLVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGMAEGEASAKAMKE 124
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Match: A0A7S2VF94_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VF94_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.230e-18 Identity = 44/63 (69.84%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 103 MGFFGLGAPEIAVIVVVAAVILGPDKLTGLAKDVGKMAGELKEVPKEFQAGIEEGERTTKVRK 291
MG FGLG PEI VI+V AA +LGP KL L KD GK+AGELKEVPKEFQ G+EEGE KV K
Sbjct: 62 MGLFGLGVPEIGVILVAAAFVLGPQKLAELGKDAGKIAGELKEVPKEFQKGLEEGEAQAKVIK 124
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Match: A0A8J9TU44_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TU44_PHATR) HSP 1 Score: 81.6 bits (200), Expect = 2.530e-18 Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 103 MGFFGLGAPEIAVIVVVAAVILGPDKLTGLAKDVGKMAGELKEVPKEFQAGIEEGERTTKVRKDDPAQVDDAE 321
MG FGLG PE+AVI + AA +LGP KL L KD GK+AGELKEVP EFQ G++EGE K KD+ + +D E
Sbjct: 1 MGLFGLGVPELAVIAIAAAFLLGPQKLAELGKDAGKIAGELKEVPAEFQKGLQEGETKAKSLKDEISVKEDEE 73
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Match: A0A7S2SMJ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMJ0_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.110e-18 Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 97 VRMGFFGLGAPEIAVIVVVAAVILGPDKLTGLAKDVGKMAGELKEVPKEFQAGIEEGERTTKVRKDDPA 303
V MG FGLGAPEIAVIV VA +LGP KL +A+D+GK+AGELK+VP+EFQ G+ EGE+ K K D A
Sbjct: 97 VTMGLFGLGAPEIAVIVGVAGFVLGPQKLAEMARDMGKVAGELKDVPREFQEGLSEGEKEAKALKGDVA 165
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Match: A0A1E7F4Y7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4Y7_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 5.610e-18 Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 103 MGFFGLGAPEIAVIVVVAAVILGPDKLTGLAKDVGKMAGELKEVPKEFQAGIEEGERTTKVRK 291
MG FGLGAPE+ +I+V AA +LGPDKL KD GK+AGELKEVPKEFQAG+ EGE K K
Sbjct: 63 MGLFGLGAPEVGIILVAAAFLLGPDKLAEFGKDAGKIAGELKEVPKEFQAGMAEGEANAKKMK 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig715.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig715.3.1 >prot_P-wetherbeei_contig715.3.1 ID=prot_P-wetherbeei_contig715.3.1|Name=mRNA_P-wetherbeei_contig715.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp PPSLRSSAFAPRCAATVAPMRPRGASASGAGAVRMGFFGLGAPEIAVIVVback to top mRNA from alignment at P-wetherbeei_contig715:2710..3033+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig715.3.1 ID=mRNA_P-wetherbeei_contig715.3.1|Name=mRNA_P-wetherbeei_contig715.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig715:2710..3033+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig715:2710..3033+ >mRNA_P-wetherbeei_contig715.3.1 ID=mRNA_P-wetherbeei_contig715.3.1|Name=mRNA_P-wetherbeei_contig715.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig715:2710..3033+ (Phaeothamnion wetherbeei SAG_119_79)back to top |