mRNA_P-wetherbeei_contig7106.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7106.3.1
Unique NamemRNA_P-wetherbeei_contig7106.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A127EXV9_9HYPH (Extracytoplasmic binding receptor n=2 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EXV9_9HYPH)

HSP 1 Score: 402 bits (1032), Expect = 1.530e-138
Identity = 193/264 (73.11%), Postives = 229/264 (86.74%), Query Frame = 1
Query:    1 MNRREVLKAGVGSLAVTSFGIASPRIVRAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
            +NRRE+LKAG+GSL   + G+ +    RAA+WPTK +RV+VPYAPGSATDLVPRTV + V HDVGQS +VENRPGGGTT+G+N V +ADPDG+T+L+HSNAIVTVPAIQANVPYDPV DFS +TPLGNVP+V+VV+P K I ++++LVA AKA PG INY AAGIGTPPHLA ERFRLAA FEGQLVPF+GAPEA+TE + GR+D YF PI PA+PLIR+GKLLAL V+SSKRASALPDVPT++EAG P+SD DFWVGAFVPK+
Sbjct:    6 VNRREILKAGMGSLTAVAAGLPAMGPARAADWPTKAVRVVVPYAPGSATDLVPRTVLEQVGHDVGQSFVVENRPGGGTTVGSNQVKQADPDGYTMLIHSNAIVTVPAIQANVPYDPVADFSAITPLGNVPMVLVVAPSKGIKSVKELVAKAKANPGQINYGAAGIGTPPHLAMERFRLAAGFEGQLVPFKGAPEALTETMTGRIDIYFAPITPALPLIRDGKLLALTVASSKRASALPDVPTSIEAGVPDSDFDFWVGAFVPKK 269          
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A6N7GNP2_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GNP2_9HYPH)

HSP 1 Score: 332 bits (851), Expect = 4.520e-111
Identity = 164/261 (62.84%), Postives = 200/261 (76.63%), Query Frame = 1
Query:   19 LKAGVGSLAVTSFGIASPRIVRAAE---WPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
            L+A   +  +  F      +   AE   WPTK++R++VP+A GSATDLVPR VF+ V    G++ ++ENRPGGGTT G   VAK+DPDG+T+LVHSN  VT PAIQANVPYDPV+DFSG+TPL  VP+V+V+SP KKI TL++LVA AKA PG +NYAAAGIGTPPHL  ER R+AA F GQ+VPF+GAPEA+TEVL GRVD YF P+ PA+  I+ G+LL LAVSS KRA+ALP+VPTT E GFPNSD DF+   FVPKQ
Sbjct:    8 LRAFCAATVIAGFVAVGSVLAEPAESQAWPTKSVRIVVPFAAGSATDLVPRAVFEQVQSQTGRTFVIENRPGGGTTTGTATVAKSDPDGYTVLVHSNGFVTTPAIQANVPYDPVKDFSGVTPLAAVPMVLVISPAKKIKTLKELVAYAKANPGKLNYAAAGIGTPPHLTMERLRVAAGFTGQIVPFKGAPEALTEVLTGRVDVYFSPLPPAVQFIQNGQLLPLAVSSLKRAAALPNVPTTTEEGFPNSDFDFYSSMFVPKQ 268          
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A536SMX3_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SMX3_9PROT)

HSP 1 Score: 288 bits (736), Expect = 1.080e-93
Identity = 144/242 (59.50%), Postives = 184/242 (76.03%), Query Frame = 1
Query:   67 SPRIVRAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
            +P    A  WPTKT+R+IVP  PGSATD++ RTV   +S  +GQ ++VENR G  TTIGA AVAKADPDGHTILV S+A    P + +++PYD  RD +G+TPL N+P V++V+P K   ++  LVAAA+AKPG+IN+A+A   T   L  ERFR +A FE   VPF+GAPEA+TEV+ GRVDFYF PI PA+PL+R+GKLLALA+ +SKRAS LPD+PTT+EAGFP+SD +FWVG FVP +
Sbjct:   24 TPATSAAQAWPTKTVRLIVPLTPGSATDILARTVSARLSGPLGQPVVVENRAGASTTIGAAAVAKADPDGHTILVTSSAHTVAPFLYSSLPYDAARDLAGVTPLANLPTVLLVAPSKGFKSVHDLVAAARAKPGSINFASAAAST--QLNAERFRRSARFEAVHVPFKGAPEALTEVMAGRVDFYFSPIAPALPLLRDGKLLALAIGASKRASILPDLPTTIEAGFPDSDYNFWVGMFVPAR 263          
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A536SNJ9_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SNJ9_9PROT)

HSP 1 Score: 283 bits (725), Expect = 4.270e-92
Identity = 128/237 (54.01%), Postives = 186/237 (78.48%), Query Frame = 1
Query:   82 RAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
            +A  WPTK++R++VP+ PGS TD++ RTV + +S  +GQ+I++ENRPG G TIG   VAKA+PDGHT+LVHS++    P+   ++PYD +RD +G+ PLG +P V+V++P K I ++++LVAAAKAKPG++N A+  IG+  HL  ERFRL A  +   VPF+G+PEA+TE++ GRVD+YFCP++  +PL+++GK++ALAV S++R+SALPD+PTT+EAG PNSD +FWVG F P +
Sbjct:   22 QAQAWPTKSVRIVVPFTPGSGTDIIARTVTEKLSPQIGQAIVIENRPGAGGTIGVGLVAKAEPDGHTLLVHSSSYTVTPSTYKDLPYDTLRDLTGVMPLGLLPNVLVMAPSKGIRSVRELVAAAKAKPGSMNSASVNIGSATHLNAERFRLGAGIDTVNVPFKGSPEALTEIITGRVDYYFCPVVSVLPLLKDGKIVALAVGSTRRSSALPDLPTTLEAGVPNSDYNFWVGMFAPAK 258          
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A127EUD3_9HYPH (Extracytoplasmic binding receptor n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EUD3_9HYPH)

HSP 1 Score: 283 bits (723), Expect = 8.300e-92
Identity = 133/247 (53.85%), Postives = 178/247 (72.06%), Query Frame = 1
Query:   46 VTSFGIASPRIVRAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVP 786
            + S  +  P +  A +WPT+ IR I+P+  GSATDLVPR VFD +S  +GQ I+VENR G G T+G NAVAKADPDG+T+L HSNA    PAI AN+PYD  RDF+ +   G++P V+V+SP K   T+Q++VAAAKA PG+ N+A+ G+G+  HL+ E+ +LAA F+   VPFRG PEA+TEV+ GRV+FYFCPI  A+P IR+GKL+AL  + + RA  LPDVPT +EAG+ N++   W+G   P
Sbjct:    9 IASLALLMPAVAAAQDWPTRPIRAIIPFGAGSATDLVPRIVFDQLSPQLGQPIVVENRTGAGGTLGTNAVAKADPDGYTLLAHSNAFSVSPAIYANLPYDTERDFAPVAAFGSLPAVLVISPSKGFKTIQEMVAAAKANPGSFNFASVGVGSGTHLSAEKLKLAAGFQATHVPFRGGPEALTEVITGRVEFYFCPINTALPYIRDGKLVALVTNGATRAPELPDVPTILEAGYRNAEFPIWIGMLAP 255          
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: UPI001911BFDD (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Ramlibacter ginsenosidimutans TaxID=502333 RepID=UPI001911BFDD)

HSP 1 Score: 281 bits (719), Expect = 3.140e-91
Identity = 136/232 (58.62%), Postives = 180/232 (77.59%), Query Frame = 1
Query:   94 WPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPK 789
            WPTK IR+IVP+  GS TD+V RTV DA+S  +GQ I+VEN+PG G TIGA  VAKA+PDG+T+L+HS+  V  PAI +N+ YD VRD SG+TPL +VP V+VVSP +   T+  LVAAAKAKPG++NYA+AG G+  H+  E+F+L A  + Q VPF+G PEA+T+V+GGR DF+F P+  A+P++++GKL+ALAVS+++R+ ALPDVPTT+EAG PNSD   WVG  VP 
Sbjct:   23 WPTKPIRMIVPFTAGSVTDIVARTVGDAMSRSLGQPIVVENKPGAGGTIGAAQVAKAEPDGYTVLIHSSGHVLNPAIYSNLSYDTVRDLSGVTPLASVPNVLVVSPTRGWHTVADLVAAAKAKPGSLNYASAGTGSATHMNAEKFKLGAGIDAQHVPFKGTPEALTDVIGGRDDFFFAPMASALPMVKDGKLVALAVSTAQRSPALPDVPTTLEAGVPNSDYTLWVGMIVPS 254          
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A6N7H0Y7_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H0Y7_9HYPH)

HSP 1 Score: 280 bits (716), Expect = 9.830e-91
Identity = 138/236 (58.47%), Postives = 171/236 (72.46%), Query Frame = 1
Query:   85 AAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
            A  WPTK + VIVP+  GSATD++ RTV   +S  +GQ  +VENRPG G TIG  AVAKADPDGHTIL+HS++    P    N PY  +RD  G+TPL  +P V+V+SP K I ++  LV AAKAKPGT+NYA+AG+GT   L  ERFRL A  E   VPF+G PEA+TEV+ GRVD+YFCP+   +PLI E +L ALA  SSKR++ALPD+PTT+EAG PNSD +FWVG FVP +
Sbjct:   22 AQSWPTKRVTVIVPFTAGSATDIMARTVVQRLSEQLGQPFVVENRPGAGGTIGVGAVAKADPDGHTILIHSSSYTITPTTYPNTPYSTLRDLVGITPLALLPNVLVISPAKGIKSVPDLVRAAKAKPGTMNYASAGVGTATQLNAERFRLGAGIEVVHVPFKGTPEALTEVIAGRVDYYFCPVNAVLPLIAEKQLRALATGSSKRSAALPDLPTTLEAGVPNSDYNFWVGMFVPAK 257          
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A537T483_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537T483_9PROT)

HSP 1 Score: 279 bits (714), Expect = 1.910e-90
Identity = 149/257 (57.98%), Postives = 188/257 (73.15%), Query Frame = 1
Query:    4 NRREVLKAGVGSLAVTSFGIASPRIVRAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVG 774
            +RR +L A +   A+++FG A  R VRA  WPTK IRVIVP   GSATD++ R V D VS  + Q IIVENRPG G TIG  AVAKADPDGHTIL +S+     PA ++N+ ++ + D + + PLGN+P+V+VV+P K   TL   VAAA+AK G INYA+AG G   HL  ERFRLAA FE   +PF+GAPEA+TEV+ GR DFYF P++ A+PL+++G+L ALAVS S RASALPDVPTTVEAG+PNS+ +FW G
Sbjct:    6 SRRRLLLAAI---ALSAFGSAG-RQVRAQAWPTKPIRVIVPLTAGSATDVMARLVMDQVSARLAQPIIVENRPGAGNTIGMRAVAKADPDGHTILANSSTHTVTPATRSNLGFE-MTDLAAIVPLGNMPVVMVVNPAKGYKTLTDFVAAARAKHGMINYASAGAGNSSHLNGERFRLAAGFEAVHLPFKGAPEALTEVVAGRADFYFAPLINALPLLKDGQLQALAVSGSARASALPDVPTTVEAGYPNSEYNFWAG 257          
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: UPI0017BFB4CD (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI0017BFB4CD)

HSP 1 Score: 277 bits (709), Expect = 2.000e-89
Identity = 140/255 (54.90%), Postives = 185/255 (72.55%), Query Frame = 1
Query:   25 AGVGSLAVTSFGIASPRIVRAAEWPT-KTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVP 786
            A +  LA+T+ G A P       WPT + IRVIVP   GSATD++ RTVFD VS  +GQ++IVEN+PG   TIGA  VAKA+PDG+T+LV+S++   VP+  +N+P++   DF+ + PL ++P V+VVSP K        V AAKA PG++ Y + G+G   H A ERFRLAA FEG  VP++GAPEA++EVL GR+DFYF P+ P + L+R+G+L ALAVSS+KR+SALPDVPTTVEAGFP S  +FW+GAF+P
Sbjct:   27 AALAFLALTAAGEAQP-------WPTARPIRVIVPLTAGSATDVLARTVFDQVSRQIGQTVIVENKPGAAQTIGAAMVAKAEPDGYTVLVNSSSHTVVPSTFSNLPFNVATDFAAVAPLASIPTVMVVSPAKNYADAAAFVKAAKASPGSMTYGSGGVGNSTHFAAERFRLAAGFEGVHVPYKGAPEALSEVLTGRIDFYFSPVPPTLSLVRDGQLRALAVSSAKRSSALPDVPTTVEAGFPESGYEFWIGAFLP 274          
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A537R9X6_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R9X6_9PROT)

HSP 1 Score: 273 bits (698), Expect = 6.720e-88
Identity = 136/251 (54.18%), Postives = 177/251 (70.52%), Query Frame = 1
Query:   40 LAVTSFGIASPRIVRAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
            +A  +   A PR+  A  WP K IRVI+P++ GS  D+V R VF+ +   +GQ++I+ENR GGG T+GA AVA+A+PDG+T++ HS+A VT PAI  N  YD V DF+ +   G+ P V VV+PEK I TLQQLVAAAKAKPG+I +  AG+G+  H++ E  R +A FE   VPFRG PE +TE++ GRVDF    I  A+P IREGKL+ALAVS+ +R+SALPDVPTT EAG+ NSD  FW G F P +
Sbjct:   18 IAAAAITPALPRVSCAQSWPAKPIRVIIPFSAGSTIDIVARIVFEPLGRQLGQALIIENRGGGGGTVGAAAVARAEPDGYTLMAHSSAHVTTPAIYPNAAYDTVEDFAAVAAFGSSPNVTVVAPEKGIKTLQQLVAAAKAKPGSITFGTAGVGSATHISAEILRFSAGFEALQVPFRGMPEILTEIMSGRVDFTCSTIATALPFIREGKLVALAVSTPQRSSALPDVPTTTEAGYKNSDYTFWTGLFAPAK 268          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127EXV9_9HYPH1.530e-13873.11Extracytoplasmic binding receptor n=2 Tax=Rhodopla... [more]
A0A6N7GNP2_9HYPH4.520e-11162.84Tripartite tricarboxylate transporter substrate bi... [more]
A0A536SMX3_9PROT1.080e-9359.50Tripartite tricarboxylate transporter substrate bi... [more]
A0A536SNJ9_9PROT4.270e-9254.01Tripartite tricarboxylate transporter substrate bi... [more]
A0A127EUD3_9HYPH8.300e-9253.85Extracytoplasmic binding receptor n=1 Tax=Rhodopla... [more]
UPI001911BFDD3.140e-9158.62tripartite tricarboxylate transporter substrate bi... [more]
A0A6N7H0Y7_9HYPH9.830e-9158.47Tripartite tricarboxylate transporter substrate bi... [more]
A0A537T483_9PROT1.910e-9057.98Tripartite tricarboxylate transporter substrate bi... [more]
UPI0017BFB4CD2.000e-8954.90Tripartite tricarboxylate transporter substrate bi... [more]
A0A537R9X6_9PROT6.720e-8854.18Tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7106contigP-wetherbeei_contig7106:2408..3199 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog365046.Rta_23740
PFAMsTctC
Model size792
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.03e-84
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1N4MC@1224|Proteobacteria,2VKJS@28216|Betaproteobacteria,4ABJ4@80864|Comamonadaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size792
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186958.8386703-CDS-P-wetherbeei_contig7106:2407..31991683186958.8386703-CDS-P-wetherbeei_contig7106:2407..3199Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7106 2408..3199 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7106.3.1prot_P-wetherbeei_contig7106.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7106 2408..3199 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7106.3.1

>prot_P-wetherbeei_contig7106.3.1 ID=prot_P-wetherbeei_contig7106.3.1|Name=mRNA_P-wetherbeei_contig7106.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp
MNRREVLKAGVGSLAVTSFGIASPRIVRAAEWPTKTIRVIVPYAPGSATD
LVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSN
AIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAA
AKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVL
GGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPN
SDLDFWVGAFVPKQ
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mRNA from alignment at P-wetherbeei_contig7106:2408..3199+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7106.3.1 ID=mRNA_P-wetherbeei_contig7106.3.1|Name=mRNA_P-wetherbeei_contig7106.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig7106:2408..3199+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATCGTCGTGAAGTTCTCAAGGCCGGTGTCGGTTCACTTGCGGTTAC GTCGTTCGGCATAGCGTCGCCGCGGATCGTGCGAGCCGCAGAGTGGCCGA CCAAGACGATCCGCGTCATCGTTCCTTATGCTCCCGGCAGCGCGACCGAT CTCGTCCCGCGCACGGTATTCGACGCGGTCTCGCATGACGTCGGCCAATC CATCATCGTCGAAAACCGGCCCGGCGGCGGCACCACCATCGGGGCCAATG CGGTCGCCAAGGCCGATCCAGACGGCCACACCATTCTGGTGCACTCCAAT GCCATCGTCACGGTGCCGGCCATCCAGGCCAACGTGCCGTACGACCCGGT GCGGGATTTTTCCGGTCTGACCCCGCTCGGCAACGTGCCGCTCGTGGTCG TTGTTTCGCCGGAGAAAAAGATCACGACGCTCCAGCAGTTGGTTGCGGCC GCCAAGGCAAAACCTGGCACGATCAACTATGCCGCGGCCGGCATCGGCAC GCCGCCGCATCTGGCCACCGAGCGCTTCCGGCTCGCCGCGAATTTCGAGG GCCAGCTCGTGCCGTTCCGGGGTGCCCCGGAGGCGATCACCGAGGTGCTG GGTGGCCGCGTCGATTTCTATTTCTGTCCGATCCTGCCGGCGATCCCGCT GATCCGTGAGGGCAAGCTTTTGGCGCTGGCGGTGAGCAGTTCCAAGCGCG CCTCCGCGTTGCCGGATGTGCCGACGACGGTGGAAGCCGGATTCCCGAAT TCCGATCTCGATTTCTGGGTCGGCGCCTTCGTGCCCAAGCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7106:2408..3199+

>mRNA_P-wetherbeei_contig7106.3.1 ID=mRNA_P-wetherbeei_contig7106.3.1|Name=mRNA_P-wetherbeei_contig7106.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig7106:2408..3199+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATCGTCGTGAAGTTCTCAAGGCCGGTGTCGGTTCACTTGCGGTTAC
GTCGTTCGGCATAGCGTCGCCGCGGATCGTGCGAGCCGCAGAGTGGCCGA
CCAAGACGATCCGCGTCATCGTTCCTTATGCTCCCGGCAGCGCGACCGAT
CTCGTCCCGCGCACGGTATTCGACGCGGTCTCGCATGACGTCGGCCAATC
CATCATCGTCGAAAACCGGCCCGGCGGCGGCACCACCATCGGGGCCAATG
CGGTCGCCAAGGCCGATCCAGACGGCCACACCATTCTGGTGCACTCCAAT
GCCATCGTCACGGTGCCGGCCATCCAGGCCAACGTGCCGTACGACCCGGT
GCGGGATTTTTCCGGTCTGACCCCGCTCGGCAACGTGCCGCTCGTGGTCG
TTGTTTCGCCGGAGAAAAAGATCACGACGCTCCAGCAGTTGGTTGCGGCC
GCCAAGGCAAAACCTGGCACGATCAACTATGCCGCGGCCGGCATCGGCAC
GCCGCCGCATCTGGCCACCGAGCGCTTCCGGCTCGCCGCGAATTTCGAGG
GCCAGCTCGTGCCGTTCCGGGGTGCCCCGGAGGCGATCACCGAGGTGCTG
GGTGGCCGCGTCGATTTCTATTTCTGTCCGATCCTGCCGGCGATCCCGCT
GATCCGTGAGGGCAAGCTTTTGGCGCTGGCGGTGAGCAGTTCCAAGCGCG
CCTCCGCGTTGCCGGATGTGCCGACGACGGTGGAAGCCGGATTCCCGAAT
TCCGATCTCGATTTCTGGGTCGGCGCCTTCGTGCCCAAGCAG
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