mRNA_P-wetherbeei_contig7106.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A127EXV9_9HYPH (Extracytoplasmic binding receptor n=2 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EXV9_9HYPH) HSP 1 Score: 402 bits (1032), Expect = 1.530e-138 Identity = 193/264 (73.11%), Postives = 229/264 (86.74%), Query Frame = 1
Query: 1 MNRREVLKAGVGSLAVTSFGIASPRIVRAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
+NRRE+LKAG+GSL + G+ + RAA+WPTK +RV+VPYAPGSATDLVPRTV + V HDVGQS +VENRPGGGTT+G+N V +ADPDG+T+L+HSNAIVTVPAIQANVPYDPV DFS +TPLGNVP+V+VV+P K I ++++LVA AKA PG INY AAGIGTPPHLA ERFRLAA FEGQLVPF+GAPEA+TE + GR+D YF PI PA+PLIR+GKLLAL V+SSKRASALPDVPT++EAG P+SD DFWVGAFVPK+
Sbjct: 6 VNRREILKAGMGSLTAVAAGLPAMGPARAADWPTKAVRVVVPYAPGSATDLVPRTVLEQVGHDVGQSFVVENRPGGGTTVGSNQVKQADPDGYTMLIHSNAIVTVPAIQANVPYDPVADFSAITPLGNVPMVLVVAPSKGIKSVKELVAKAKANPGQINYGAAGIGTPPHLAMERFRLAAGFEGQLVPFKGAPEALTETMTGRIDIYFAPITPALPLIRDGKLLALTVASSKRASALPDVPTSIEAGVPDSDFDFWVGAFVPKK 269
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A6N7GNP2_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GNP2_9HYPH) HSP 1 Score: 332 bits (851), Expect = 4.520e-111 Identity = 164/261 (62.84%), Postives = 200/261 (76.63%), Query Frame = 1
Query: 19 LKAGVGSLAVTSFGIASPRIVRAAE---WPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
L+A + + F + AE WPTK++R++VP+A GSATDLVPR VF+ V G++ ++ENRPGGGTT G VAK+DPDG+T+LVHSN VT PAIQANVPYDPV+DFSG+TPL VP+V+V+SP KKI TL++LVA AKA PG +NYAAAGIGTPPHL ER R+AA F GQ+VPF+GAPEA+TEVL GRVD YF P+ PA+ I+ G+LL LAVSS KRA+ALP+VPTT E GFPNSD DF+ FVPKQ
Sbjct: 8 LRAFCAATVIAGFVAVGSVLAEPAESQAWPTKSVRIVVPFAAGSATDLVPRAVFEQVQSQTGRTFVIENRPGGGTTTGTATVAKSDPDGYTVLVHSNGFVTTPAIQANVPYDPVKDFSGVTPLAAVPMVLVISPAKKIKTLKELVAYAKANPGKLNYAAAGIGTPPHLTMERLRVAAGFTGQIVPFKGAPEALTEVLTGRVDVYFSPLPPAVQFIQNGQLLPLAVSSLKRAAALPNVPTTTEEGFPNSDFDFYSSMFVPKQ 268
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A536SMX3_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SMX3_9PROT) HSP 1 Score: 288 bits (736), Expect = 1.080e-93 Identity = 144/242 (59.50%), Postives = 184/242 (76.03%), Query Frame = 1
Query: 67 SPRIVRAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
+P A WPTKT+R+IVP PGSATD++ RTV +S +GQ ++VENR G TTIGA AVAKADPDGHTILV S+A P + +++PYD RD +G+TPL N+P V++V+P K ++ LVAAA+AKPG+IN+A+A T L ERFR +A FE VPF+GAPEA+TEV+ GRVDFYF PI PA+PL+R+GKLLALA+ +SKRAS LPD+PTT+EAGFP+SD +FWVG FVP +
Sbjct: 24 TPATSAAQAWPTKTVRLIVPLTPGSATDILARTVSARLSGPLGQPVVVENRAGASTTIGAAAVAKADPDGHTILVTSSAHTVAPFLYSSLPYDAARDLAGVTPLANLPTVLLVAPSKGFKSVHDLVAAARAKPGSINFASAAAST--QLNAERFRRSARFEAVHVPFKGAPEALTEVMAGRVDFYFSPIAPALPLLRDGKLLALAIGASKRASILPDLPTTIEAGFPDSDYNFWVGMFVPAR 263
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A536SNJ9_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SNJ9_9PROT) HSP 1 Score: 283 bits (725), Expect = 4.270e-92 Identity = 128/237 (54.01%), Postives = 186/237 (78.48%), Query Frame = 1
Query: 82 RAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
+A WPTK++R++VP+ PGS TD++ RTV + +S +GQ+I++ENRPG G TIG VAKA+PDGHT+LVHS++ P+ ++PYD +RD +G+ PLG +P V+V++P K I ++++LVAAAKAKPG++N A+ IG+ HL ERFRL A + VPF+G+PEA+TE++ GRVD+YFCP++ +PL+++GK++ALAV S++R+SALPD+PTT+EAG PNSD +FWVG F P +
Sbjct: 22 QAQAWPTKSVRIVVPFTPGSGTDIIARTVTEKLSPQIGQAIVIENRPGAGGTIGVGLVAKAEPDGHTLLVHSSSYTVTPSTYKDLPYDTLRDLTGVMPLGLLPNVLVMAPSKGIRSVRELVAAAKAKPGSMNSASVNIGSATHLNAERFRLGAGIDTVNVPFKGSPEALTEIITGRVDYYFCPVVSVLPLLKDGKIVALAVGSTRRSSALPDLPTTLEAGVPNSDYNFWVGMFAPAK 258
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A127EUD3_9HYPH (Extracytoplasmic binding receptor n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EUD3_9HYPH) HSP 1 Score: 283 bits (723), Expect = 8.300e-92 Identity = 133/247 (53.85%), Postives = 178/247 (72.06%), Query Frame = 1
Query: 46 VTSFGIASPRIVRAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVP 786
+ S + P + A +WPT+ IR I+P+ GSATDLVPR VFD +S +GQ I+VENR G G T+G NAVAKADPDG+T+L HSNA PAI AN+PYD RDF+ + G++P V+V+SP K T+Q++VAAAKA PG+ N+A+ G+G+ HL+ E+ +LAA F+ VPFRG PEA+TEV+ GRV+FYFCPI A+P IR+GKL+AL + + RA LPDVPT +EAG+ N++ W+G P
Sbjct: 9 IASLALLMPAVAAAQDWPTRPIRAIIPFGAGSATDLVPRIVFDQLSPQLGQPIVVENRTGAGGTLGTNAVAKADPDGYTLLAHSNAFSVSPAIYANLPYDTERDFAPVAAFGSLPAVLVISPSKGFKTIQEMVAAAKANPGSFNFASVGVGSGTHLSAEKLKLAAGFQATHVPFRGGPEALTEVITGRVEFYFCPINTALPYIRDGKLVALVTNGATRAPELPDVPTILEAGYRNAEFPIWIGMLAP 255
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: UPI001911BFDD (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Ramlibacter ginsenosidimutans TaxID=502333 RepID=UPI001911BFDD) HSP 1 Score: 281 bits (719), Expect = 3.140e-91 Identity = 136/232 (58.62%), Postives = 180/232 (77.59%), Query Frame = 1
Query: 94 WPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPK 789
WPTK IR+IVP+ GS TD+V RTV DA+S +GQ I+VEN+PG G TIGA VAKA+PDG+T+L+HS+ V PAI +N+ YD VRD SG+TPL +VP V+VVSP + T+ LVAAAKAKPG++NYA+AG G+ H+ E+F+L A + Q VPF+G PEA+T+V+GGR DF+F P+ A+P++++GKL+ALAVS+++R+ ALPDVPTT+EAG PNSD WVG VP
Sbjct: 23 WPTKPIRMIVPFTAGSVTDIVARTVGDAMSRSLGQPIVVENKPGAGGTIGAAQVAKAEPDGYTVLIHSSGHVLNPAIYSNLSYDTVRDLSGVTPLASVPNVLVVSPTRGWHTVADLVAAAKAKPGSLNYASAGTGSATHMNAEKFKLGAGIDAQHVPFKGTPEALTDVIGGRDDFFFAPMASALPMVKDGKLVALAVSTAQRSPALPDVPTTLEAGVPNSDYTLWVGMIVPS 254
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A6N7H0Y7_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H0Y7_9HYPH) HSP 1 Score: 280 bits (716), Expect = 9.830e-91 Identity = 138/236 (58.47%), Postives = 171/236 (72.46%), Query Frame = 1
Query: 85 AAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
A WPTK + VIVP+ GSATD++ RTV +S +GQ +VENRPG G TIG AVAKADPDGHTIL+HS++ P N PY +RD G+TPL +P V+V+SP K I ++ LV AAKAKPGT+NYA+AG+GT L ERFRL A E VPF+G PEA+TEV+ GRVD+YFCP+ +PLI E +L ALA SSKR++ALPD+PTT+EAG PNSD +FWVG FVP +
Sbjct: 22 AQSWPTKRVTVIVPFTAGSATDIMARTVVQRLSEQLGQPFVVENRPGAGGTIGVGAVAKADPDGHTILIHSSSYTITPTTYPNTPYSTLRDLVGITPLALLPNVLVISPAKGIKSVPDLVRAAKAKPGTMNYASAGVGTATQLNAERFRLGAGIEVVHVPFKGTPEALTEVIAGRVDYYFCPVNAVLPLIAEKQLRALATGSSKRSAALPDLPTTLEAGVPNSDYNFWVGMFVPAK 257
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A537T483_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537T483_9PROT) HSP 1 Score: 279 bits (714), Expect = 1.910e-90 Identity = 149/257 (57.98%), Postives = 188/257 (73.15%), Query Frame = 1
Query: 4 NRREVLKAGVGSLAVTSFGIASPRIVRAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVG 774
+RR +L A + A+++FG A R VRA WPTK IRVIVP GSATD++ R V D VS + Q IIVENRPG G TIG AVAKADPDGHTIL +S+ PA ++N+ ++ + D + + PLGN+P+V+VV+P K TL VAAA+AK G INYA+AG G HL ERFRLAA FE +PF+GAPEA+TEV+ GR DFYF P++ A+PL+++G+L ALAVS S RASALPDVPTTVEAG+PNS+ +FW G
Sbjct: 6 SRRRLLLAAI---ALSAFGSAG-RQVRAQAWPTKPIRVIVPLTAGSATDVMARLVMDQVSARLAQPIIVENRPGAGNTIGMRAVAKADPDGHTILANSSTHTVTPATRSNLGFE-MTDLAAIVPLGNMPVVMVVNPAKGYKTLTDFVAAARAKHGMINYASAGAGNSSHLNGERFRLAAGFEAVHLPFKGAPEALTEVVAGRADFYFAPLINALPLLKDGQLQALAVSGSARASALPDVPTTVEAGYPNSEYNFWAG 257
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: UPI0017BFB4CD (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI0017BFB4CD) HSP 1 Score: 277 bits (709), Expect = 2.000e-89 Identity = 140/255 (54.90%), Postives = 185/255 (72.55%), Query Frame = 1
Query: 25 AGVGSLAVTSFGIASPRIVRAAEWPT-KTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVP 786
A + LA+T+ G A P WPT + IRVIVP GSATD++ RTVFD VS +GQ++IVEN+PG TIGA VAKA+PDG+T+LV+S++ VP+ +N+P++ DF+ + PL ++P V+VVSP K V AAKA PG++ Y + G+G H A ERFRLAA FEG VP++GAPEA++EVL GR+DFYF P+ P + L+R+G+L ALAVSS+KR+SALPDVPTTVEAGFP S +FW+GAF+P
Sbjct: 27 AALAFLALTAAGEAQP-------WPTARPIRVIVPLTAGSATDVLARTVFDQVSRQIGQTVIVENKPGAAQTIGAAMVAKAEPDGYTVLVNSSSHTVVPSTFSNLPFNVATDFAAVAPLASIPTVMVVSPAKNYADAAAFVKAAKASPGSMTYGSGGVGNSTHFAAERFRLAAGFEGVHVPYKGAPEALSEVLTGRIDFYFSPVPPTLSLVRDGQLRALAVSSAKRSSALPDVPTTVEAGFPESGYEFWIGAFLP 274
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Match: A0A537R9X6_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R9X6_9PROT) HSP 1 Score: 273 bits (698), Expect = 6.720e-88 Identity = 136/251 (54.18%), Postives = 177/251 (70.52%), Query Frame = 1
Query: 40 LAVTSFGIASPRIVRAAEWPTKTIRVIVPYAPGSATDLVPRTVFDAVSHDVGQSIIVENRPGGGTTIGANAVAKADPDGHTILVHSNAIVTVPAIQANVPYDPVRDFSGLTPLGNVPLVVVVSPEKKITTLQQLVAAAKAKPGTINYAAAGIGTPPHLATERFRLAANFEGQLVPFRGAPEAITEVLGGRVDFYFCPILPAIPLIREGKLLALAVSSSKRASALPDVPTTVEAGFPNSDLDFWVGAFVPKQ 792
+A + A PR+ A WP K IRVI+P++ GS D+V R VF+ + +GQ++I+ENR GGG T+GA AVA+A+PDG+T++ HS+A VT PAI N YD V DF+ + G+ P V VV+PEK I TLQQLVAAAKAKPG+I + AG+G+ H++ E R +A FE VPFRG PE +TE++ GRVDF I A+P IREGKL+ALAVS+ +R+SALPDVPTT EAG+ NSD FW G F P +
Sbjct: 18 IAAAAITPALPRVSCAQSWPAKPIRVIIPFSAGSTIDIVARIVFEPLGRQLGQALIIENRGGGGGTVGAAAVARAEPDGYTLMAHSSAHVTTPAIYPNAAYDTVEDFAAVAAFGSSPNVTVVAPEKGIKTLQQLVAAAKAKPGSITFGTAGVGSATHISAEILRFSAGFEALQVPFRGMPEILTEIMSGRVDFTCSTIATALPFIREGKLVALAVSTPQRSSALPDVPTTTEAGYKNSDYTFWTGLFAPAK 268 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7106.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7106.3.1 >prot_P-wetherbeei_contig7106.3.1 ID=prot_P-wetherbeei_contig7106.3.1|Name=mRNA_P-wetherbeei_contig7106.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp MNRREVLKAGVGSLAVTSFGIASPRIVRAAEWPTKTIRVIVPYAPGSATDback to top mRNA from alignment at P-wetherbeei_contig7106:2408..3199+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7106.3.1 ID=mRNA_P-wetherbeei_contig7106.3.1|Name=mRNA_P-wetherbeei_contig7106.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig7106:2408..3199+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7106:2408..3199+ >mRNA_P-wetherbeei_contig7106.3.1 ID=mRNA_P-wetherbeei_contig7106.3.1|Name=mRNA_P-wetherbeei_contig7106.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig7106:2408..3199+ (Phaeothamnion wetherbeei SAG_119_79)back to top |