mRNA_P-wetherbeei_contig7063.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Match: A0A6H5JHA7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA7_9PHAE) HSP 1 Score: 101 bits (251), Expect = 1.580e-21 Identity = 54/95 (56.84%), Postives = 73/95 (76.84%), Query Frame = 1
Query: 256 FFLYILRTEFPDLWEASVLAGDDHAIVCVPQSTSLPA-DVTREDAETHVLLPTA-APGEFMTLNGRRVGLVGNELVTMAGFAEVRRVRLLLTEEL 534
+FL++LRT+FP++W A+V+AG ++CVPQSTSL D+T +A HVL P+ PG+F+TL+G V LVGNE+VT AGF E RRVRLLL+E+L
Sbjct: 101 YFLHMLRTDFPEIW-AAVVAGTVDTVICVPQSTSLSQEDLTAAEARAHVLTPSEEVPGDFLTLDGWSVSLVGNEVVTGAGFPEWRRVRLLLSEDL 194
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Match: D7FTN1_ECTSI (Similar to hect domain and RLD 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN1_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 6.110e-19 Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 268 ILRTEFPDLWEASVLAGDDHAIVCVPQSTSLPA-DVTREDAETHVLLPTA-APGEFMTLNGRRVGLVGNELVTMAGFAEVRRVRLLLTEEL 534
+LR +FP++W A+V+AG ++CVPQSTSL D+T +A HVL P+ PG+F+TL+G V LVGNE+VT AGF E RRVRLLL+E+L
Sbjct: 1 MLRMDFPEIW-AAVVAGTGDTVICVPQSTSLSQEDLTAAEARAHVLTPSEEVPGDFLTLDGWSVSLVGNEVVTGAGFPEWRRVRLLLSEDL 90
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Match: A0A7S2FSU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FSU3_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.390e-14 Identity = 37/77 (48.05%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 244 SDPHFFLYILRTEFPDLWEASVLAGDDHAIVCVPQSTSLPADVTREDAETHVLLPTAAPGEFMTLNGRRVGLVGNEL 474
S+ FLYILRTE+P+LWE + A V VP+ST++ D+T D ETH+L PT PGE+ T + V ++GNEL
Sbjct: 47 SEDLLFLYILRTEYPELWET---IEANSATVVVPRSTAIGIDLTLADVETHILYPTKIPGEYRTSRNQCVAIIGNEL 120
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Match: A0A067BVU2_SAPPC (VPS9 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BVU2_SAPPC) HSP 1 Score: 64.3 bits (155), Expect = 8.840e-9 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 331 IVCVPQSTSL-PADVTREDAETHVLLPTAAPGEFMTLNGRRVGLVGNELVTMAGFAEVRRVRLLLTEE 531
+VCVPQS SL A V+ +TH LLP A G++ +LNG+++ +VG + T AGF + R VR+L+TEE
Sbjct: 35 LVCVPQSLSLLTAAVSLSQLQTHFLLPDAQVGQYRSLNGKQIAVVGAHIHTKAGFRDARVVRILMTEE 102
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Match: A0A067BNK2_SAPPC (VPS9 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BNK2_SAPPC) HSP 1 Score: 64.3 bits (155), Expect = 1.020e-8 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 331 IVCVPQSTSL-PADVTREDAETHVLLPTAAPGEFMTLNGRRVGLVGNELVTMAGFAEVRRVRLLLTEE 531
+VCVPQS SL A V+ +TH LLP A G++ +LNG+++ +VG + T AGF + R VR+L+TEE
Sbjct: 35 LVCVPQSLSLLTAAVSLSQLQTHFLLPDAQVGQYRSLNGKQIAVVGAHIHTKAGFRDTRVVRILMTEE 102
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Match: T0REC7_SAPDV (VPS9 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0REC7_SAPDV) HSP 1 Score: 64.3 bits (155), Expect = 1.020e-8 Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 331 IVCVPQSTSL-PADVTREDAETHVLLPTAAPGEFMTLNGRRVGLVGNELVTMAGFAEVRRVRLLLTEE 531
++C+PQS SL A ++R +TH LLP A G++ +LNG+++ +VG + T AGF + R VR+L+TEE
Sbjct: 36 LMCIPQSLSLLTAAISRTQLQTHFLLPDAQVGQYRSLNGKQIAVVGAHIHTKAGFHDARVVRILMTEE 103
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Match: A0A8K1CEM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEM3_PYTOL) HSP 1 Score: 63.9 bits (154), Expect = 1.400e-8 Identity = 33/76 (43.42%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 325 HAIVCVPQSTSLPADV--TREDAETHVLLPTAA-----PGEFMTLNGRRVGLVGNELVTMAGFAEVRRVRLLLTEE 531
+ + CVPQ+ SL ADV +++D TH LLP + PG++ TLNG+ V ++G+++ T GF E R+VR+LL+E+
Sbjct: 27 NCVFCVPQARSLVADVAVSQDDVFTHFLLPVSRGTEQQPGQYETLNGKTVSIIGSQVHTRRGFDEPRKVRILLSEQ 102
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Match: A0A662YDJ3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDJ3_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 4.590e-7 Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 271 LRTEFPDLWEASVLAGDDHAIVCVPQSTSLPAD--VTREDAETHVLLPTA----------APGEFMTLNGRRVGLVGNELVTMAGFAEVRRVRLLLTEELEL 540
LR DL E + A + ++CVPQ SL AD ++++D TH L P PGE+ TLNG++V +VG+ + T GF + R+VR+L++E+ EL
Sbjct: 6 LRAFSADL-EQTQRALRSNCLLCVPQPRSLVADQAISQDDLYTHFLTPVGFDDDVEDSERRPGEYNTLNGKQVSIVGSHVRTGKGFDDRRQVRILMSEKREL 106
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Match: A0A662XG25_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XG25_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 5.450e-7 Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 325 HAIVCVPQSTSLPAD--VTREDAETHVLLPTA----------APGEFMTLNGRRVGLVGNELVTMAGFAEVRRVRLLLTEELEL 540
+ ++CVPQ SL AD ++++D TH L P PGE+ TLNG++V +VG+ + T GF + R+VR+L++E+ EL
Sbjct: 23 NCLLCVPQPRSLVADQAISQDDLYTHFLTPVGFDDDIEDSERRPGEYNTLNGKQVSIVGSHVHTGKGFTDRRQVRILMSEKREL 106
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Match: H3HD67_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HD67_PHYRM) HSP 1 Score: 54.7 bits (130), Expect = 1.320e-5 Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = 1
Query: 331 IVCVPQSTSLPAD--VTREDAETHVLLPTAAP-------GEFMTLNGRRVGLVGNELVTMAGFAEVRRVRLLLTEELEL 540
+ CVPQ SL AD +T++ TH L P A GE+ TLNG++V +VG+ + T GF + R+VR+LL+E+ E+
Sbjct: 25 LFCVPQPRSLLADEALTQDVLYTHFLTPAGADDALERRLGEYETLNGKQVAVVGSHIHTGKGFRDRRQVRILLSEKREI 103 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7063.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7063.1.1 >prot_P-wetherbeei_contig7063.1.1 ID=prot_P-wetherbeei_contig7063.1.1|Name=mRNA_P-wetherbeei_contig7063.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=186bp RKAHFSVPQHSFERENNALARSFFTRQKLGLLTPMTSAVVYDDNTTQVSPback to top mRNA from alignment at P-wetherbeei_contig7063:2292..2850+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7063.1.1 ID=mRNA_P-wetherbeei_contig7063.1.1|Name=mRNA_P-wetherbeei_contig7063.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=559bp|location=Sequence derived from alignment at P-wetherbeei_contig7063:2292..2850+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7063:2292..2850+ >mRNA_P-wetherbeei_contig7063.1.1 ID=mRNA_P-wetherbeei_contig7063.1.1|Name=mRNA_P-wetherbeei_contig7063.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=558bp|location=Sequence derived from alignment at P-wetherbeei_contig7063:2292..2850+ (Phaeothamnion wetherbeei SAG_119_79)back to top |