mRNA_P-wetherbeei_contig704.2.6 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Match: D7G8M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M3_ECTSI) HSP 1 Score: 178 bits (452), Expect = 2.600e-49 Identity = 110/240 (45.83%), Postives = 150/240 (62.50%), Query Frame = 2
Query: 599 GRRQVAEACLDLLLIQILAHNTAAVQEADA--ATDG-EASHSSQQSDG----------NGSQKRGAIQGVPPK--------LSAEQSAALDARIEGLGFEVGYRLVERTCQQRFLVGEQLEVIKFICKEFWTEVFRKQVDKLQTDHKGTFVLKDTNFRLVARYAAGASMSRSVSDRTWAGGIDNSAANRELVRRLLLYPCGLVRGAVANLGLSASVRADFGRDDRDGGPPLPAITITITM 1255
G R V+E +LL +I+A+ A V + A ATD AS + + +G +GS G++ P L ++Q+ ++ARIE +G+EVGYRLVERTCQ+R++ G+QLE IKF+CK+ W+++F+KQVDKLQTDH+GTFVLKD+NFR +RYA D++A +R+LV RLL PCGLVRGA+ANLGL A VRA F DDR G LPA++ TI +
Sbjct: 18 GNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDRLRASEAGVEDEGEGEKGGXXXDDGSDTGGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAE-----------------DDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASF-LDDRGGMSDLPAVSFTIKI 239
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Match: A0A7S2UTW2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTW2_9STRA) HSP 1 Score: 152 bits (385), Expect = 5.020e-41 Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 2
Query: 779 LSAEQSA-ALDARIEGLGFEVGYRLVERTCQQRFLVGEQLEVIKFICKEFWTEVFRKQVDKLQTDHKGTFVLKDTNFRLVARYAAGASMSRSVSDRTWAGGIDNSAANRELVRRLLLYPCGLVRGAVANLGLSASV-RADF 1195
L +E A AL R+EG+GFEVGYR VER Q+R + E LE+IKF+CK+FWTEVF+KQVDKLQTDH+GTFVLKD FR V R+ A D+ A ++LV RLL +PCG++RGA+AN+GL+A+V RADF
Sbjct: 5 LDSEAGAEALAHRLEGMGFEVGYRFVERVAQKRVIPSEPLEIIKFLCKDFWTEVFKKQVDKLQTDHRGTFVLKDAKFRWVLRFVA-----------------DSDATGKQLVARLLQFPCGILRGALANMGLAAAVVRADF 128
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Match: A0A835ZD08_9STRA (Transport protein particle component, Bet3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD08_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.220e-36 Identity = 74/149 (49.66%), Postives = 97/149 (65.10%), Query Frame = 2
Query: 809 ARIEGLGFEVGYRLVERTCQQRFLVGEQLEVIKFICKEFWTEVFRKQVDKLQTDHKGTFVLKDTNFRLVARYAAGASMSRSVSDRTWAGGIDNSAANRELVRRLLLYPCGLVRGAVANLGLSASVRADFGRDDRDGGPPLPAITITITM 1255
AR+E LG++VG RL ER CQ + L GE LE +KFICK+FWTEVFRKQ+DKLQTDH+GTFVL++ NF+ +A+YA D S +R L L + CGLVRGA+A L A+V+ADF D++ LPA++ TI +
Sbjct: 66 ARLESLGWDVGCRLTERLCQTKLLSGEPLEAVKFICKDFWTEVFRKQIDKLQTDHRGTFVLRELNFKWLAKYAP-----------------DKSRTDRNLAWFTLQFACGLVRGAMATLNQPATVKADFW-DEKTDRSLLPAVSFTIRL 196
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Match: F0YPS8_AURAN (Uncharacterized protein n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPS8_AURAN) HSP 1 Score: 123 bits (308), Expect = 1.470e-29 Identity = 64/149 (42.95%), Postives = 92/149 (61.74%), Query Frame = 2
Query: 809 ARIEGLGFEVGYRLVERTCQQRFLVGEQLEVIKFICKEFWTEVFRKQVDKLQTDHKGTFVLKDTNFRLVARYAAGASMSRSVSDRTWAGGIDNSAANRELVRRLLLYPCGLVRGAVANLGLSASVRADFGRDDRDGGPPLPAITITITM 1255
+R E G+EVGYR VER Q R L + LEVIKFICK+ W E+F KQ+DKLQT+H+G FVLKD FR +AR ++ D++ A + + +L +PCG++RGA+ANLG+ A+V A++G LP+ + +I +
Sbjct: 28 SRPELHGYEVGYRFVERIAQARALAADHLEVIKFICKDVWNEIFGKQIDKLQTNHRGVFVLKDYTFRWLARVSS-----------------DDAEAMKRVTANILQFPCGVLRGALANLGIVATVTAEYGT--------LPSCSFSIRI 151
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Match: B9FWP9_ORYSJ (Os07g0291100 protein n=20 Tax=Oryzeae TaxID=147380 RepID=B9FWP9_ORYSJ) HSP 1 Score: 122 bits (307), Expect = 3.030e-29 Identity = 65/168 (38.69%), Postives = 99/168 (58.93%), Query Frame = 2
Query: 752 GAIQGVPPKLSAEQSAALDARIEGLGFEVGYRLVERTCQQRFLVGEQLEVIKFICKEFWTEVFRKQVDKLQTDHKGTFVLKDTNFRLVARYAAGASMSRSVSDRTWAGGIDNSAANRELVRRLLLYPCGLVRGAVANLGLSASVRADFGRDDRDGGPPLPAITITITM 1255
G P+L+A RIE +GF+VG++L ER +R + LE IKFICK+FW+E+F+KQ+D L+T+H+GTFVL+D +FR + R + S+ + + + +SAA + LL +PCG++RGA+ NLG+S SV AD LPA + + +
Sbjct: 23 GGFYAAKPELAAR-------RIEAIGFQVGHQLTERYTMERPRFSDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRVSVDPSVESMDATENDSTTLGDSAA--QTTSMLLYFPCGIIRGALTNLGISCSVTADMSN--------LPACSFVVRI 173
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Match: A2YKC5_ORYSI (Uncharacterized protein n=9 Tax=Oryza TaxID=4527 RepID=A2YKC5_ORYSI) HSP 1 Score: 122 bits (306), Expect = 5.560e-29 Identity = 63/148 (42.57%), Postives = 92/148 (62.16%), Query Frame = 2
Query: 752 GAIQGVPPKLSAEQSAALDARIEGLGFEVGYRLVERTCQQRFLVGEQLEVIKFICKEFWTEVFRKQVDKLQTDHKGTFVLKDTNFRLVARYAAGASMSRSVSDRTWAGGIDNSAANRELVRRLLLYPCGLVRGAVANLGLSASVRADF 1195
G P+L+A RIE +GF+VG++L ER +R + LE IKFICK+FW+E+FRKQ+D L+T+H+GTFVL+D FR + R + S+ + + + +SAA + LL +PCG++RGA+ NLG+S SV AD
Sbjct: 23 GGFYAAKPELAAR-------RIEAIGFQVGHQLTERYTMERPRFSDHLEAIKFICKDFWSELFRKQIDNLKTNHRGTFVLQDNRFRWLTRVSVDPSVESMGATENDSTTLGDSAA--QTTSMLLYFPCGIIRGALTNLGISCSVTADM 161
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Match: A0A3L6QA31_PANMI (Trafficking protein particle complex subunit 6B n=2 Tax=Panicum TaxID=4539 RepID=A0A3L6QA31_PANMI) HSP 1 Score: 123 bits (309), Expect = 5.960e-29 Identity = 76/202 (37.62%), Postives = 109/202 (53.96%), Query Frame = 2
Query: 752 GAIQGVPPKLSAEQSAALDARIEGLGFEVGYRLVERTCQQRFLVGEQLEVIKFICKEFWTEVFRKQVDKLQTDHKGTFVLKDTNFRLVARYAAGASMSRSVSDRTWAGGIDNSAANRELVRRLLLYPCGLVRGAVANLGLSASVRADFGRDDRDGGPPLPAITITITMGRG---PAVTARR*EGLEWAEWAERAAFTETELV 1348
G P+L+A RIE +GF+VG++L ER +R + LE IKFICK+FW+E+F+KQ+D L+T+H+GTFVL+D +FR + R + S + + + + ++AA + LL +PCGL+RGA+ NLG+S SV AD G L + + RG P T R EG WA A T V
Sbjct: 23 GRFYAAKPELAAR-------RIEAIGFQVGHQLSERYTMERPRFSDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRVSLDPSAESTDAPDNDSAPLGDTAA--QTTSMLLYFPCGLIRGALTNLGISCSVSADMSNLPAYGAVNLHCTSYINQVKRGYQNPVETIR--EGTIGFAWATLGAAANTYNV 213
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Match: A0A096UT45_WHEAT (Uncharacterized protein n=12 Tax=Pooideae TaxID=147368 RepID=A0A096UT45_WHEAT) HSP 1 Score: 121 bits (304), Expect = 8.070e-29 Identity = 64/168 (38.10%), Postives = 100/168 (59.52%), Query Frame = 2
Query: 752 GAIQGVPPKLSAEQSAALDARIEGLGFEVGYRLVERTCQQRFLVGEQLEVIKFICKEFWTEVFRKQVDKLQTDHKGTFVLKDTNFRLVARYAAGASMSRSVSDRTWAGGIDNSAANRELVRRLLLYPCGLVRGAVANLGLSASVRADFGRDDRDGGPPLPAITITITM 1255
G P+L+A RIE +GF+VG++L ER +R + LE IKFICK+FW+E+F+KQ+D L+T+H+GTFVL+D +FR + R + ++ + + +G + +SAA + LL +PCGL+RGA+ NLG+ +V AD LPA + + +
Sbjct: 23 GRFYAAKPELAA-------GRIEAIGFQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRVSLDPAVESTDATENDSGSLGDSAA--QTTSMLLYFPCGLIRGALTNLGIPCAVSADMSN--------LPACSFVVRI 173
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Match: M8AD83_TRIUA (Trafficking protein particle complex subunit 6B n=5 Tax=Poaceae TaxID=4479 RepID=M8AD83_TRIUA) HSP 1 Score: 120 bits (301), Expect = 1.400e-28 Identity = 61/148 (41.22%), Postives = 94/148 (63.51%), Query Frame = 2
Query: 752 GAIQGVPPKLSAEQSAALDARIEGLGFEVGYRLVERTCQQRFLVGEQLEVIKFICKEFWTEVFRKQVDKLQTDHKGTFVLKDTNFRLVARYAAGASMSRSVSDRTWAGGIDNSAANRELVRRLLLYPCGLVRGAVANLGLSASVRADF 1195
G P+L+A RIE +GF+VG++L ER +R + LE IKFICK+FW+E+F+KQ+D L+T+H+GTFVL+D +FR + R + ++ + + +G + +SAA + LL +PCGL+RGA+ NLG+ +V AD
Sbjct: 9 GRFYAAKPELAA-------GRIEAIGFQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRVSLDPAVESTDATENDSGSLGDSAA--QTTSMLLYFPCGLIRGALTNLGIPCAVSADM 147
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Match: A0A1B6PKD9_SORBI (Uncharacterized protein n=9 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PKD9_SORBI) HSP 1 Score: 120 bits (301), Expect = 2.030e-28 Identity = 64/168 (38.10%), Postives = 97/168 (57.74%), Query Frame = 2
Query: 752 GAIQGVPPKLSAEQSAALDARIEGLGFEVGYRLVERTCQQRFLVGEQLEVIKFICKEFWTEVFRKQVDKLQTDHKGTFVLKDTNFRLVARYAAGASMSRSVSDRTWAGGIDNSAANRELVRRLLLYPCGLVRGAVANLGLSASVRADFGRDDRDGGPPLPAITITITM 1255
G + P+L+A RIE +GF+VG++L ER +R + LE IKFICK+FW+E+F+KQ+D L+T+H+GTFVL+D FR + R + + S + + ++AA + LL +PCGL+RGA+ NLG+ SV AD LPA + + +
Sbjct: 21 GGLYAAKPELAAR-------RIEAIGFQVGHQLSERYTMERPRFSDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRVSLDPYTENTDSTENDSAALGDTAA--QTTTMLLYFPCGLIRGALTNLGIPCSVSADMSN--------LPACSFVVRI 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig704.2.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig704.2.6 >prot_P-wetherbeei_contig704.2.6 ID=prot_P-wetherbeei_contig704.2.6|Name=mRNA_P-wetherbeei_contig704.2.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=239bp MSGADSGGGGRRQVAEACLDLLLIQILAHNTAAVQEADAATDGEASHSSQback to top mRNA from alignment at P-wetherbeei_contig704:3374..5685+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig704.2.6 ID=mRNA_P-wetherbeei_contig704.2.6|Name=mRNA_P-wetherbeei_contig704.2.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2312bp|location=Sequence derived from alignment at P-wetherbeei_contig704:3374..5685+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig704:3374..5685+ >mRNA_P-wetherbeei_contig704.2.6 ID=mRNA_P-wetherbeei_contig704.2.6|Name=mRNA_P-wetherbeei_contig704.2.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig704:3374..5685+ (Phaeothamnion wetherbeei SAG_119_79)back to top |