mRNA_P-wetherbeei_contig6932.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Match: A0A7S2U9S9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9S9_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.580e-21 Identity = 61/157 (38.85%), Postives = 87/157 (55.41%), Query Frame = 2
Query: 146 AEFSSSALSCEVSFLV--TCKPF-----PYFPTLLHLVLKTLVFFSKVVLEAEEAVFSSQCPCCNIETRRPYGELGSVDSTNCCCCVGVGSGLTGGMAVFPGCGCDAALVNEIVAEMKKRQQERGDTAQLLRTEEQAEQMALLHAKMDAVMRQLGVP 595
++F + ++FL+ C PF PY TL+ L+ EE + C +RRPYGELGSVD +NC CC V SGL + PGCGCD V+EIV+++K+R + RGDT Q+ R EEQ +++A L AK+D ++ L +P
Sbjct: 4 SQFEDKEIDASMNFLLWLACCPFTVGAVPYKTTLM--------------LDGEEVNKTDVNLCGKTVSRRPYGELGSVDKSNCLCCYSVTSGLG---EIAPGCGCDEQKVDEIVSDLKQRMKGRGDTGQIARAEEQLDKIAQLEAKVDLILDHLNIP 143
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Match: A0A7S2EYK2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EYK2_TRICV) HSP 1 Score: 97.1 bits (240), Expect = 3.840e-20 Identity = 55/117 (47.01%), Postives = 74/117 (63.25%), Query Frame = 2
Query: 245 TLVFFSKVVLEAEEAVFSSQCPCCNIETRRPYGELGSVDSTNCCCCVGVGSGLTGGMAVFPGCGCDAALVNEIVAEMKKRQQERGDTAQLLRTEEQAEQMALLHAKMDAVMRQLGVP 595
T+ + +K++LE EE V + Q C +RRPYGELGSVD N CC V S L + PGCGCD + V+EIV E+K R + RGDTAQ+ R EEQ +++ L K+D +M L +P
Sbjct: 62 TIPYSTKLLLEHEEIVKTDQNLCGKTVSRRPYGELGSVDKGNFCCFVAATSALG---EISPGCGCDNSRVDEIVTELKARMRGRGDTAQIQRAEEQLKRLDDLETKIDLIMDHLEIP 175
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Match: A0A7S2ME03_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ME03_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 8.980e-20 Identity = 53/110 (48.18%), Postives = 71/110 (64.55%), Query Frame = 2
Query: 266 VVLEAEEAVFSSQCPCCNIETRRPYGELGSVDSTNCCCCVGVGSGLTGGMAVFPGCGCDAALVNEIVAEMKKRQQERGDTAQLLRTEEQAEQMALLHAKMDAVMRQLGVP 595
+VLE EEAV + + C +RRPYGELGSVD NC CCV S L PG GC+ A V+EIV E++ R + RGDTAQ+ ++E+Q E++A L K+D +M L +P
Sbjct: 38 LVLEKEEAVRTDKSICGASSSRRPYGELGSVDKANCLCCVQATSELG---EFSPGWGCNEATVDEIVRELRTRMKTRGDTAQIQQSEKQLEKLAELETKIDLIMEHLNIP 144
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Match: A0A7S3F1E5_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F1E5_9EUKA) HSP 1 Score: 94.0 bits (232), Expect = 4.610e-19 Identity = 66/162 (40.74%), Postives = 90/162 (55.56%), Query Frame = 2
Query: 155 SSSALSCEVSFLVTCKPFPYFPTLLHLV----LKTLVFFSKVV-LEAEEAVFSSQCPCCNIETRRPYGELGSVD-STNCCCCVGVGSGLTGGM--AVFPGCGCDAALVNEIVAEMKKRQQERGDTAQLLRTEEQAE-------QMALLHAKMDAVMRQLGVP 595
S S+++ EV+ +P FP ++V L LV + + LE EE V+ PC R PYG+LGSVD +T C CC+ V S LT G + PGCGC+ ALV EIVAE+K R + RGDT + R E+ E +A L AK+DA++ L +P
Sbjct: 9 SKSSMAKEVAMTSVTEPQAEFPLKHYVVTPGCLCCLVLCPQTLDLEPEEVVYKISSPCDTKVKRMPYGQLGSVDKATACGCCIAVDSNLTPGAEETIAPGCGCETALVEEIVAELKARMKARGDTGNIKRAEQTLEIVAKVQNDVADLTAKVDAILAHLNIP 170
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Match: A0A7S2LLC8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLC8_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.870e-16 Identity = 49/109 (44.95%), Postives = 65/109 (59.63%), Query Frame = 2
Query: 266 VVLEAEEAVFSSQCPCCNIETRRPYGELGSVDSTNCCCCVGVGSGLTGGMAVFPGCGCDAALVNEIVAEMKKRQQERGDTAQLLRTEEQAEQMALLHAKMDAVMRQLGV 592
+ LEAEE V + C +RRPYGELGSVD ++ CC + S + PGCGCD V+ VAE+KKR + RGDT Q+ RTEE ++ L AK+D +M L +
Sbjct: 43 IELEAEEVVKTDVLICGKNVSRRPYGELGSVDKSSICCFQALHSNFG---PIMPGCGCDGEKVDFAVAELKKRMKARGDTGQIKRTEELLKKFNALDAKLDLIMDHLKI 148
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Match: A0A7S0J3X5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J3X5_9EUKA) HSP 1 Score: 83.6 bits (205), Expect = 2.040e-15 Identity = 54/117 (46.15%), Postives = 71/117 (60.68%), Query Frame = 2
Query: 266 VVLEAEEAVFSSQCPCCNIETRRPYGELGSVDS-TNCCCCVGVGSGLTGGMAVFPGCGCDAALVNEIVAEMKKRQQERGDTAQLLRTEEQAE---QMAL----LHAKMDAVMRQLGV 592
+VLE EEAV + + C RRPYGELGSVD T C CC V SGL + PG GC+ ALV+E+V E+K R + RGDT Q+ R E+Q + Q+ L L+ K+D +M L +
Sbjct: 53 LVLEPEEAVMTRKTMCGTNVQRRPYGELGSVDKGTACGCCTNVTSGLG---PISPGWGCEEALVDELVEELKARMKTRGDTGQIKRAEQQLDAITQVQLDIKQLNTKLDVIMAHLQI 166
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Match: B7G3G8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G3G8_PHATC) HSP 1 Score: 82.8 bits (203), Expect = 3.510e-15 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 2
Query: 311 CCNIETRRPYGELGSVDSTNCCCCVGVGSGLTGGMAVFPGCGCDAALVNEIVAEMKKRQQERGDTAQLLRTEEQAEQMALLHAKM 565
C N +RRPYGELGSVD C CC+ V S + PGCGCDA V+EIV E+K R + RGDTAQ+LR EE +++ L AK+
Sbjct: 79 CGNHVSRRPYGELGSVDRGTCLCCISVESAFG---PISPGCGCDAGKVDEIVHELKTRMRLRGDTAQILRAEETLQRLHDLDAKL 160
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Match: A0A7S3U0M8_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3U0M8_EMIHU) HSP 1 Score: 80.1 bits (196), Expect = 5.520e-14 Identity = 49/115 (42.61%), Postives = 72/115 (62.61%), Query Frame = 2
Query: 260 SKVVLEAEEAVFSSQCPCCNIETRRPYGELGSVDSTN-CCCCVGVGSGLTGGMA-VFPGCGCDAALVNEIVAEMKKRQQERGDTAQLLRTEEQAEQMALLHAKMDAVMRQLGVPP 598
+K+ L +EAV + C +I +RPY +LGSVDS + C C VGS LTG + PG GC+A LV EIV E+++R+ RG+ AQ+ E+ A +A HAK+D ++ +G+ P
Sbjct: 51 TKLELGPDEAVLTKHDCCNHIVQKRPYAQLGSVDSHHECGICWSVGSDLTGRDGRLMPGWGCNAPLVREIVEELQERKLGRGNVAQMRSHEDLAASVAHAHAKLDTILSHMGLEP 165
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Match: A0A7S1TUR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUR1_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.500e-12 Identity = 57/161 (35.40%), Postives = 79/161 (49.07%), Query Frame = 2
Query: 122 GANLHCYMAEFSSSALSCEVSFLVTCKPFPYFPTLLHLVLKTLVFFSKVV-LEAEEAVFSSQCPCCNIETRRPYGELGSVDSTNCCCCVGVGSGLT--GG--MAVFPGCGCDAALVNEIVAEMKKRQQERGDTAQLLRTEEQAEQMALLHAKMDAVMRQLG 589
G +L + ++ + C+ + C +L+L L V +KV+ LE EEAV + C C +RRPYGELGSVDS C C GV S L GG + G GCD EI M+ R ++RGDT Q+ E + ++ AV R+LG
Sbjct: 45 GVDLKFDVVTYNVTDTGCQTCCCIMCP-------ILYLPLVPGVMGTKVLTLEEEEAVLTVDCFLCTSRSRRPYGELGSVDSVRYCWCWGVNSNLLLIGGNPWPIIQGWGCDRETAEEIATIMRTRMKQRGDTGQIRMAERN-------YRELQAVRRELG 191
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Match: A0A7S3LHR4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LHR4_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.900e-11 Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = 2
Query: 281 EEAVFSSQCPCCNIETRRPYGELGSVDSTNCCCCVGVGSGLT-----GG--MAVFPGCGCDAALVNEIVAEMKKRQQERGDTAQLLRTEEQAEQMALLHAKMDAVMRQLGV 592
E + + C C + + PYGEL V +CCC VG +G GG ++++PG GC+A V EIV E+K RQ RGD A++ E Q +A + K+D +++ G+
Sbjct: 66 EATLKNDSCLCIKSQKKVPYGELAGVGEESCCCFVGFSAGALSPSGDGGQQLSIYPGTGCNADYVREIVEELKARQYHRGDAARMRVAETQNAALARIEGKLDLLLQNAGI 176 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6932.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6932.2.1 >prot_P-wetherbeei_contig6932.2.1 ID=prot_P-wetherbeei_contig6932.2.1|Name=mRNA_P-wetherbeei_contig6932.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp MAEFSSSALSCEVSFLVTCKPFPYFPTLLHLVLKTLVFFSKVVLEAEEAVback to top mRNA from alignment at P-wetherbeei_contig6932:1972..3167- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6932.2.1 ID=mRNA_P-wetherbeei_contig6932.2.1|Name=mRNA_P-wetherbeei_contig6932.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1196bp|location=Sequence derived from alignment at P-wetherbeei_contig6932:1972..3167- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6932:1972..3167- >mRNA_P-wetherbeei_contig6932.2.1 ID=mRNA_P-wetherbeei_contig6932.2.1|Name=mRNA_P-wetherbeei_contig6932.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig6932:1972..3167- (Phaeothamnion wetherbeei SAG_119_79)back to top |