mRNA_P-wetherbeei_contig6930.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Match: D8LL60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL60_ECTSI) HSP 1 Score: 247 bits (631), Expect = 2.200e-78 Identity = 134/225 (59.56%), Postives = 165/225 (73.33%), Query Frame = 3
Query: 132 TLLGNADFFARCDLVLASASPRRKEIFGLMQLSPRV--VISDFEENLDKKSFARPEDYAVTNARCKAAEVAARLFADRRKAEDGGGGAQNLPVVVVGADTIVDLDGEILEKPRDEQEAHEVLSRLSGRQHLVHSGVAVFTAACGAEQPAAEFCATTRVAFASLSAGEIAAYIKSGEPMDKAGSYGIQGLGGQMVTGVEGCYFNVMGFPFNRFAGTVAALIAEGKV 800
TLL DF ++CDLVLAS SPRR EI G+M L+ RV V+S+FEENLDK SF P DYA+ NA KA EVA+R D G GA+ P+VVVG+DTIVDLDG ILEKPRD++ A +LS LSGR+HLVHSGV++FT+ G ++ A FC TT+V F +LSA EI AYI++ EPMDK+GSYGIQG GGQ V V+GCYFNVMGFP + F+ +A +I +GK
Sbjct: 22 TLLAQGDFMSKCDLVLASQSPRRLEIVGMMGLADRVRVVVSEFEENLDKSSFKDPRDYAIANAEGKAREVASRALLDAE-----GEGAE--PIVVVGSDTIVDLDGVILEKPRDDEHAFSMLSSLSGRRHLVHSGVSIFTSKLGKDKAAVSFCETTQVLFTALSAEEIRAYIRTREPMDKSGSYGIQGEGGQFVRKVDGCYFNVMGFPMHAFSRRLAEVIRDGKA 239
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Match: A0A836CIZ2_9STRA (Inosine triphosphate pyrophosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ2_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.160e-77 Identity = 139/235 (59.15%), Postives = 165/235 (70.21%), Query Frame = 3
Query: 102 MSAPTVASRSTLLGNADFFARCDLVLASASPRRKEIFGLMQLSPR--VVISDFEENLDKKSFARPEDYAVTNARCKAAEVAARLFADRRKAEDGGGGAQNLPVVVVGADTIVDLDGEILEKPRDEQEAHEVLSRLSGRQHLVHSGVAVFTAACGAEQPAAEFCATTRVAFASLSAGEIAAYIKSGEPMDKAGSYGIQGLGGQMVTGVEGCYFNVMGFPFNRFAGTVAALIAEGKV 800
MSA T STLL + F C +VLAS SPRRKEIFGLM L R V++S+FEE+L K F +P DYA A+ KAAEVAA++ R + N P +VVG+DTIV+LDG ILEKP D Q A +L LSGR+HLVHSGVAVFT ACG+ QPAA + TT V F ++S EI AY++SGEPMDKAG+YGIQGLGGQ V GVEGCYFNVMGFP ++F +A LI GKV
Sbjct: 2 MSAAT-QQHSTLLAHKAFMDGCRVVLASKSPRRKEIFGLMGLDERLEVIVSEFEEDLRKADFPQPGDYAAATAKFKAAEVAAKVLPAR---------SDNRPTIVVGSDTIVELDGTILEKPDDAQHAFRMLKSLSGRRHLVHSGVAVFTGACGSAQPAACWYDTTSVEFLAMSDDEIWAYVESGEPMDKAGAYGIQGLGGQFVKGVEGCYFNVMGFPMSKFGTCLAKLIESGKV 226
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Match: A0A7S2S2U2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2U2_9STRA) HSP 1 Score: 218 bits (556), Expect = 8.550e-67 Identity = 123/223 (55.16%), Postives = 146/223 (65.47%), Query Frame = 3
Query: 138 LGNADFFARCDLVLASASPRRKEIFGLMQLSP---RVVISDFEENLDKKSFAR---PEDYAVTNARCKAAEVAARLFADRRKAEDGGGGAQNLPVVVVGADTIVDLDGEILEKPRDEQEAHEVLSRLSGRQHLVHSGVAVFTAACGAEQPAAEFCATTRVAFASLSAGEIAAYIKSGEPMDKAGSYGIQGLGGQMVTGVEGCYFNVMGFPFNRFAGTVAALIA 788
LG+ + +RC LVLAS SPRR+EIF LM L +V+SDFEE+L K F P+ Y A KA VA ++F+ G G PV VVGADTIVDLDGE+LEKP EQ+A L RLSGR H VHS VA+F++ G +P FC TTRV F LS EI+AY+ SGEPMDKAGSYGIQGLGGQ V +EGCYFNVMG P RF+ +A L+A
Sbjct: 36 LGSIEALSRCRLVLASKSPRRREIFDLMGLDRVGYDIVVSDFEEDLPKSDFPGEDGPQRYCEATATGKARSVAGKIFSQ------GSGTPSANPVFVVGADTIVDLDGEVLEKPSSEQDAAATLRRLSGRAHFVHSSVAIFSSRHGVAEPVISFCETTRVKFGQLSDAEISAYVASGEPMDKAGSYGIQGLGGQFVDQIEGCYFNVMGLPMRRFSTAIAGLVA 252
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Match: A0A1X6P3D6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3D6_PORUM) HSP 1 Score: 206 bits (525), Expect = 1.140e-62 Identity = 116/212 (54.72%), Postives = 145/212 (68.40%), Query Frame = 3
Query: 171 LVLASASPRRKEIFGLMQLSPRVVISDFEENLDKKSFARPEDYAVTNARCKAAEVAARLFADRRKAEDGGGGAQNLPVVVVGADTIVDLDGEILEKPRDEQEAHEVLSRLSGRQHLVHSGVAVFTAACGA--EQPAAEFCATTRVAFASLSAGEIAAYIKSGEPMDKAGSYGIQGLGGQMVTGVEGCYFNVMGFPFNRFAGTVAALIAEGKV 800
+VLAS SPRR+EI ++ L+ V S FEENLDK +F P +YA TNA KAA V A L A GGGA P +V+G+DTIV +DG ILEKPR E A+E+L+ LSGR+H V S VA+FT + ++PA FC TRV FA LS IAAYI++GEPMDKAGSYGIQG+GG +TG+ GCY+NVMGFP + F VA L+ G++
Sbjct: 15 IVLASGSPRRREILTMLGLAHEVHASAFEENLDKGAFPTPAEYAKTNASSKAAAVVAELAA--------GGGAGRCPDLVIGSDTIVVVDGRILEKPRSEAAAYEMLATLSGREHSVLSAVALFTPSRSEVRDKPATVFCEHTRVRFAPLSPETIAAYIRTGEPMDKAGSYGIQGVGGSFITGITGCYYNVMGFPLHAFTSAVARLLDAGEL 218
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Match: W7UAS6_9STRA (Acetylserotonin o-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAS6_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.570e-61 Identity = 120/247 (48.58%), Postives = 155/247 (62.75%), Query Frame = 3
Query: 96 ISMSAPTVASRSTLLGNADFFARCDLVLASASPRRKEIFGLMQLSPR---VVISDFEENLDKKSFARPEDYAVTNARCKAAEVAARLFADRRKAEDGGGGAQN----LPVVVVGADTIVDLDGEILEKPRDEQEAHEVLSRLSGRQHLVHSGVAVFTA-----ACGAEQPAAEFCATTRVAFASLSAGEIAAYIKSGEPMDKAGSYGIQGLGGQMVTGVEGCYFNVMGFPFNRFAGTVAALIAEGKV 800
+S +AP+ S + L + F + +L+LAS SPRR+EI LM + V+ SDF E+LDK++F P DYA NA CKA EVA +LF + G G Q +V+G+DTIVD DG ILEKP D Q A+ +LS LSGR HLVHSGVA++++ G P FC T RV FA LS EI YI+SGEPMDKAG YGIQGLGGQ+V G+EGCYF VMG P ++ + +A + ++
Sbjct: 46 MSAAAPSRTSSTLLPYLSIFKTKVNLILASKSPRRQEILQLMGFDSKDFVVLPSDFPEDLDKRNFINPADYAQKNAECKAQEVATKLFGGSSSGDVGKVGGQRDAGKKTTIVIGSDTIVDRDGIILEKPEDAQHAYAMLSSLSGRTHLVHSGVAIYSSKGPKSGDGIPLPVVSFCETARVDFAPLSEEEIWNYIRSGEPMDKAGGYGIQGLGGQVVRGIEGCYFTVMGMPMHKLSVALAQFAEDDQI 292
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Match: A0A7S1TQE1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQE1_9STRA) HSP 1 Score: 203 bits (516), Expect = 2.590e-61 Identity = 119/220 (54.09%), Postives = 142/220 (64.55%), Query Frame = 3
Query: 132 TLLGNADFFARCDLVLASASPRRKEIFGLMQLSPRVVISDFEENLDKKSFARPEDYAVTNARCKAAEVAARLFADRRKAEDGGGGAQNLPVVVVGADTIVDLDGEILEKPRDEQEAHEVLSRLSGRQHLVHSGVAVFTAACG--AEQPAAEFCATTRVAFASLSAGEIAAYIKSGEPMDKAGSYGIQGLGGQMVTGVEGCYFNVMGFPFNRFAGTVAALI 785
TLLG D VL SASPRR EIFGLM L P +V+S F E+L K SFA YA A KA EVA RL D GAQ P V+VG+DT+V++DG++LEKP D +EA +L R+SGR H VHSGVAVF+ G A P F TT V F L+ +I Y+ S EPMDKAG YGIQGLGGQMV G+ GCYFNVMGFP +RF+ ++A L+
Sbjct: 4 TLLGAGDAARSVRWVLGSASPRRAEIFGLMGLQPEIVVSGFAEDLAKSSFATAAAYAEGTATEKAREVAGRLLPDA--------GAQ--PTVIVGSDTVVEIDGDVLEKPGDVEEAKAMLRRMSGRNHFVHSGVAVFSNLGGRDAGAPTMTFAETTEVTFVELTELDIENYVASREPMDKAGGYGIQGLGGQMVCGLSGCYFNVMGFPMHRFSKSMAELL 213
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Match: A0A7S2UUT0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUT0_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.920e-59 Identity = 124/238 (52.10%), Postives = 153/238 (64.29%), Query Frame = 3
Query: 129 STLLGNADFF-ARCDLVLASASPRRKEIFGLMQLSP----RVVISDFEENLDKKSFARPEDYAVTNARCKAAEVAARLFADRRKAEDGGGGAQNLPVVVVGADTIVDLDGEILEKPRDEQEAHEVLSRLSGRQHLVHSGVAVFT----AACGAEQPAAE-----FCATTRVAFASLSAGEIAAYIKSGEPMDKAGSYGIQGLGGQMVTGVEGCYFNVMGFPFNRFAGTVAALIAEGKV 800
ST+L ++ + C +VLAS SPRR+EIF +M ++ VV+S+FEENLDK SF P YA NA CKA +V ++ D + A++L VV ADTIVDL G+ILEKP DEQ A ++LS LSG HLVHSGVA+FT A GA E F TT V LS EI AYI++GEPMDK+GSYGIQG+GGQ V GV GCYFNVMGFP +RF+ +A LI K+
Sbjct: 62 STILDRLEYLKSSCGIVLASQSPRRREIFDMMGINNSFDINVVVSNFEENLDKSSFDNPGIYAQINAECKAQDVYNQIRNDESRH------AKSLAVVA--ADTIVDLRGKILEKPSDEQHAFQMLSELSGTSHLVHSGVALFTRPPVANSGASSEDIEPNIVSFYETTEVEIVPLSEDEIWAYIRTGEPMDKSGSYGIQGIGGQFVKGVRGCYFNVMGFPMHRFSAAMAELIQSKKI 291
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Match: A0A0G4GLH8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLH8_VITBC) HSP 1 Score: 196 bits (499), Expect = 9.620e-58 Identity = 118/242 (48.76%), Postives = 152/242 (62.81%), Query Frame = 3
Query: 99 SMSAPTVASRSTLLGNADFFARCD---LVLASASPRRKEIFGLMQLSPRVVISDFEENLDKKSFARPEDYAVTNARCKAAEVAARLFADRRKAEDGGGGAQNLPV-----VVVGADTIVDLDGEILEKPRDEQEAHEVLSRLSGRQHLVHSGVAVFTAACGAEQPAAEFCATTRVAFASLSAGEIAAYIKSGEPMDKAGSYGIQGLGGQMVTGVEGCYFNVMGFPFNRFAGTVAALIAEGKV 800
S S+ A+ +++LG+ + + D ++LAS SPRRKEI GLM L V S F E+LD +F+ P+ YA NA KAAEVA R A GG ++ VV+GADTIVDLDG ILEKP + +A +LSR+SGR H VH+GVA+FT G +P A F +T+V FA LS EI +Y+ SGEPMDKAG YGIQGLGG V +EGCYFNVMG P + + +A L A ++
Sbjct: 60 SRSSSLSATSTSILGSCFYPSAGDCLRVILASKSPRRKEICGLMGLDVTVYPSTFAEDLDHGAFSSPQSYAAANAAHKAAEVA-------RGALGAGGDDESSTCPPAADVVIGADTIVDLDGVILEKPANHDDAVSMLSRMSGRCHAVHTGVAIFTRRAGPAEPVAHFVESTKVKFAPLSRSEIDSYVASGEPMDKAGGYGIQGLGGMFVESIEGCYFNVMGLPMHHLSKVLAQLDANRQI 294
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Match: A0A7S0BNY9_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNY9_9RHOD) HSP 1 Score: 185 bits (469), Expect = 3.680e-54 Identity = 106/210 (50.48%), Postives = 136/210 (64.76%), Query Frame = 3
Query: 171 LVLASASPRRKEIFGLMQLSPRVVISDFEENLDKKSFARPEDYAVTNARCKAAEVAARLFADRRKAEDGGGGAQNLPVVVVGADTIVDLDGEILEKPRDEQEAHEVLSRLSGRQHLVHSGVAVFTAACGAEQPAAEFCATTRVAFASLSAGEIAAYIKSGEPMDKAGSYGIQGLGGQMVTGVEGCYFNVMGFPFNRFAGTVAALIAEGKV 800
+VLAS SPRR+EI L++L VV+S FEENLDK F+ P +Y + NAR KA EVA RL G+ P +V+G+DT+V LD +ILEKP E EA +L LS R H V + VA+F A++ +A F T V FA L+ I YI++ EPMDKAG+YGIQG+GG +V GV+GCYFNVMGFP +RFA +A L+ G V
Sbjct: 28 IVLASQSPRRREILDLLELKHDVVVSGFEENLDKSMFSHPSEYVLENARRKAEEVAKRLI-----------GSDTPPDLVIGSDTVVVLDNKILEKPLSEAEAFTMLKSLSNRNHTVLTSVALFLK--DAKKCSASFYEATNVRFAELNDDLIWEYIRTREPMDKAGAYGIQGIGGSLVKGVDGCYFNVMGFPMHRFATELAELVDRGAV 224
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Match: C1MWX6_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MWX6_MICPC) HSP 1 Score: 179 bits (455), Expect = 3.760e-52 Identity = 108/225 (48.00%), Postives = 138/225 (61.33%), Query Frame = 3
Query: 135 LLGNADFFARCDLVLASASPRRKEIFGLMQLSPRVVISDFEENLDKKSFARPEDYAVTNARCKAAEVAARLFADRRKAEDGGGGAQNLPVVVVGADTIVD-LDGEILEKPRDEQEAHEVLSRLSGRQHLVHSGVAVF--TAACGAEQPAAEFCATTRVAFASLSAGEIAAYIKSGEPMDKAGSYGIQGLGGQMVTGVEGCYFNVMGFPFNRFAGTVAALIAEGKV 800
+L +A+ L+LASASPRRKEI G + L VV+S+F+E+LDK +F +YA A KA EVA RL ++ P VV+GADT+V+ DG ILEKP+D EA ++L L G H VH+GV V G E+ F TT+V FA L EIAAYIK+GEP DKAG YGIQG G V+ + GCYFNVMGFP ++FA V+ +I EG +
Sbjct: 2 ILQHAEALCARRLILASASPRRKEILGNLGLKFDVVVSNFDEDLDKSTFTGGAEYASATATHKAMEVATRLEKEKPA-----------PFVVIGADTVVEGPDGAILEKPKDANEAMKMLLSLQGITHQVHTGVGVIFPNNGGGGERLVKTFSETTKVTFAPLGEAEIAAYIKTGEPFDKAGGYGIQGPAGAFVSSISGCYFNVMGFPVHKFADVVSKMIKEGVI 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6930.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6930.1.2 >prot_P-wetherbeei_contig6930.1.2 ID=prot_P-wetherbeei_contig6930.1.2|Name=mRNA_P-wetherbeei_contig6930.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=259bp MRLSASRTVLGIIFPYVERSGSRISMSAPTVASRSTLLGNADFFARCDLVback to top mRNA from alignment at P-wetherbeei_contig6930:676..2779- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6930.1.2 ID=mRNA_P-wetherbeei_contig6930.1.2|Name=mRNA_P-wetherbeei_contig6930.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2104bp|location=Sequence derived from alignment at P-wetherbeei_contig6930:676..2779- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6930:676..2779- >mRNA_P-wetherbeei_contig6930.1.2 ID=mRNA_P-wetherbeei_contig6930.1.2|Name=mRNA_P-wetherbeei_contig6930.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig6930:676..2779- (Phaeothamnion wetherbeei SAG_119_79)back to top |