mRNA_P-wetherbeei_contig6857.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Match: A0A1F4FCE8_9PROT (Long-chain fatty acid--CoA ligase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4FCE8_9PROT) HSP 1 Score: 173 bits (439), Expect = 8.790e-49 Identity = 91/166 (54.82%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 1 TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAPGDRIGFYCANGYQTAAVFLGTMYGGYVSVPLNLVSQPSQLEYVLEHSGTRLVFTDMEHAEALAARVEAIGGGIEVIVIDVDAPSLFLEDRLPALEAVEPGEDMPALLMYTSGTTG 498
T+R + R +PD+ LVAPETGR L++ EL RQA L R+L AG GD++G Y NGYQ+AA+FLG M GGYV PLNL++Q +QL YVL H +++FT EH ALA + +G IEVIVID DAP+LFL+DRLPA + PALLMYTSGTTG
Sbjct: 4 TLRDVLARHLARQPDRPLLVAPETGRTLSYRELDRQARLLARWLRAAGLGRGDKVGLYLPNGYQSAALFLGAMIGGYVIAPLNLLAQRAQLAYVLAHCDCKVLFTSREHEPALAEALALVGRPIEVIVIDADAPALFLDDRLPAGGFGPIASEDPALLMYTSGTTG 169
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Match: A0A521VD60_9PROT (Long-chain fatty acid--CoA ligase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VD60_9PROT) HSP 1 Score: 173 bits (439), Expect = 8.790e-49 Identity = 93/166 (56.02%), Postives = 111/166 (66.87%), Query Frame = 1
Query: 1 TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAPGDRIGFYCANGYQTAAVFLGTMYGGYVSVPLNLVSQPSQLEYVLEHSGTRLVFTDMEHAEALAARVEAIGGGIEVIVIDVDAPSLFLEDRLPALEAVEPGEDMPALLMYTSGTTG 498
T+R + R +PD+T LVAPETGR L++ EL RQA L R+L AG PGD++G Y NGYQTA +FLG M GGYV PLNL++Q SQL YVL H +++FT EH LA + + IEVIVID DAP+LFLEDRLP D PALLMYTSGTTG
Sbjct: 4 TLRGVLARHVARQPDRTLLVAPETGRTLSYRELDRQARLLARWLRLAGLEPGDKVGLYLHNGYQTALLFLGAMLGGYVITPLNLLAQRSQLAYVLAHCDCKVLFTSREHEAMLAEALALVARRIEVIVIDPDAPALFLEDRLPQGGFGPVAADDPALLMYTSGTTG 169
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Match: A0A1F3Z523_9PROT (Long-chain fatty acid--CoA ligase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 TaxID=1797483 RepID=A0A1F3Z523_9PROT) HSP 1 Score: 171 bits (432), Expect = 9.000e-48 Identity = 89/166 (53.61%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 1 TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAPGDRIGFYCANGYQTAAVFLGTMYGGYVSVPLNLVSQPSQLEYVLEHSGTRLVFTDMEHAEALAARVEAIGGGIEVIVIDVDAPSLFLEDRLPALEAVEPGEDMPALLMYTSGTTG 498
T+R + +P+ T+LVAPETGR L++ E++RQ+ L R+L AG GD++G Y NGYQTA +FLG M GGYV+ PLNL+SQ SQL YVLEH +++FT E+ + L + A+ IE IVID DAP LFLE RLPA E G + PALLMYTSGTTG
Sbjct: 4 TLRDVLAGHVARQPEDTFLVAPETGRSLSYREMERQSRLLARWLRAAGLRRGDKVGLYLHNGYQTALLFLGAMVGGYVAAPLNLLSQRSQLAYVLEHCDCKVLFTAREYEKQLGEALAAVKRPIEAIVIDPDAPELFLEQRLPAGEYEPVGAEDPALLMYTSGTTG 169
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Match: A0A2W5HHD3_9RHOO (Long-chain fatty acid--CoA ligase (Fragment) n=1 Tax=Azospira oryzae TaxID=146939 RepID=A0A2W5HHD3_9RHOO) HSP 1 Score: 160 bits (406), Expect = 3.450e-47 Identity = 82/166 (49.40%), Postives = 110/166 (66.27%), Query Frame = 1
Query: 1 TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAPGDRIGFYCANGYQTAAVFLGTMYGGYVSVPLNLVSQPSQLEYVLEHSGTRLVFTDMEHAEALAARVEAIGGGIEVIVIDVDAPSLFLEDRLPALEAVEPGEDMPALLMYTSGTTG 498
TVRH +D QA RP+ YL+APETGR +T+A L+ + L R+LLG G GD++ NGYQTA +FLG MYGG+V P+NL+SQP+QL +VL+HS ++LVF + + + A ++ I I V VIDVDA +F +P + E E+ ALLMYTSGTTG
Sbjct: 3 TVRHVIDAQAAERPEHLYLIAPETGRGITYARLREHSVALTRYLLGRGLNKGDKVSLMLHNGYQTARLFLGVMYGGFVVSPVNLLSQPTQLRHVLDHSDSKLVFVGTDFEQRVRAMLKEIRRDIAVEVIDVDAEEIFDPAAVPQVPLPEVDEEDDALLMYTSGTTG 168
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Match: A0A7C2YN21_9PROT (Long-chain fatty acid--CoA ligase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YN21_9PROT) HSP 1 Score: 169 bits (427), Expect = 5.470e-47 Identity = 86/166 (51.81%), Postives = 112/166 (67.47%), Query Frame = 1
Query: 1 TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAPGDRIGFYCANGYQTAAVFLGTMYGGYVSVPLNLVSQPSQLEYVLEHSGTRLVFTDMEHAEALAARVEAIGGGIEVIVIDVDAPSLFLEDRLPALEAVEPGEDMPALLMYTSGTTG 498
T+RH VD +AR +PD YL+APETGR LT+ L+RQ+ +L R+L G G A GD+I NGYQTA +F+GTMY G+V PLNL+SQ SQL YVL+HS R VFT E A ++ + + ++ IVI+ +A +F D LPA+E + ED LLMYTSGTTG
Sbjct: 10 TIRHYVDTRAREQPDAPYLIAPETGRVLTYEALQRQSRDLARYLRGLGLAKGDKIALMLHNGYQTARLFIGTMYAGFVVAPLNLLSQKSQLAYVLDHSDARAVFTSKELAPRVSQALAEVKREVKTIVIEPNAEEIFDRDALPAVEPFDVTEDDDVLLMYTSGTTG 175
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Match: UPI001AC8E6CC (Fatty-acyl-CoA synthase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI001AC8E6CC) HSP 1 Score: 167 bits (422), Expect = 2.700e-46 Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 1
Query: 1 TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAPGDRIGFYCANGYQTAAVFLGTMYGGYVSVPLNLVSQPSQLEYVLEHSGTRLVFTDMEHAEALAARVEAIGGGIEVIVIDVDAPSLFLEDRLPALEAVEPGEDMPALLMYTSGTTG 498
T+R +DR+A ++PD YL+APETGR LT+A LKR++++L R+LL G A GD++ F NGYQ+A + LG MYGG+V P+NL+SQ SQL +VLEHS TR VF E+ + L ++AI I VI DVDA LF E PA ED ALLMYTSGTTG
Sbjct: 5 TIRQHIDRRAATQPDHPYLIAPETGRTLTYAGLKRESESLTRYLLMLGMAKGDKVSFMLHNGYQSARLLLGAMYGGFVVQPINLLSQHSQLRFVLEHSDTRAVFVASEYRQRLDDALQAIDRPIRVIPTDVDARELFEESAAPAPALPPVDEDDDALLMYTSGTTG 170
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Match: A0A522VWS2_9PROT (Long-chain fatty acid--CoA ligase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A522VWS2_9PROT) HSP 1 Score: 166 bits (420), Expect = 5.300e-46 Identity = 89/166 (53.61%), Postives = 109/166 (65.66%), Query Frame = 1
Query: 1 TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAPGDRIGFYCANGYQTAAVFLGTMYGGYVSVPLNLVSQPSQLEYVLEHSGTRLVFTDMEHAEALAARVEAIGGGIEVIVIDVDAPSLFLEDRLPALEAVEPGEDMPALLMYTSGTTG 498
T+R + R +PD+ L+APETGR L++ EL RQA L R+L AG GD++G Y NGYQTA +FLG M GGYV PLNL++Q SQL YVL H +++FT EH ALA + + IEVIVID DAP+LFL DRLP + PALLMYTSGTTG
Sbjct: 4 TLRDVLARHVARQPDRVLLLAPETGRTLSYRELDRQARLLARWLRAAGLERGDKVGLYLHNGYQTALLFLGAMIGGYVVAPLNLLAQRSQLAYVLGHCDCKVLFTSREHEAALAEALALLERPIEVIVIDPDAPALFLGDRLPRGGFAPVAAEDPALLMYTSGTTG 169
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Match: A0A3N5XEA2_9PROT (Long-chain fatty acid--CoA ligase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5XEA2_9PROT) HSP 1 Score: 164 bits (416), Expect = 1.970e-45 Identity = 83/166 (50.00%), Postives = 110/166 (66.27%), Query Frame = 1
Query: 1 TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAPGDRIGFYCANGYQTAAVFLGTMYGGYVSVPLNLVSQPSQLEYVLEHSGTRLVFTDMEHAEALAARVEAIGGGIEVIVIDVDAPSLFLEDRLPALEAVEPGEDMPALLMYTSGTTG 498
T+RH VDR+A +P+ T+L+APETG +++A+L+R + +L RFLLG G GD++ N YQTA + +G MYGG++ PLNL++QPSQL YVLEHS TR+VFT E AE L A + I I V+ ID DA +F LP + + ALLMYTSGTTG
Sbjct: 3 TIRHYVDRRAAEQPNATWLIAPETGATMSYAQLQRDSQDLTRFLLGQGLKKGDKVALMLHNSYQTARLLIGVMYGGFMVAPLNLLAQPSQLAYVLEHSDTRVVFTSEEFAERLQAALAGIPREITVVAIDPDATEIFDRSALPGVPLPDVTATDDALLMYTSGTTG 168
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Match: A0A5C7EFV4_9PROT (AMP-binding protein n=2 Tax=Pelomicrobium methylotrophicum TaxID=2602750 RepID=A0A5C7EFV4_9PROT) HSP 1 Score: 160 bits (404), Expect = 1.670e-43 Identity = 82/166 (49.40%), Postives = 110/166 (66.27%), Query Frame = 1
Query: 1 TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAPGDRIGFYCANGYQTAAVFLGTMYGGYVSVPLNLVSQPSQLEYVLEHSGTRLVFTDMEHAEALAARVEAIGGGIEVIVIDVDAPSLFLEDRLPALEAVEPGEDMPALLMYTSGTTG 498
TVRH +D QA RP+ YL+APETGR +T+A L+ + L R+LLG G GD++ NGYQTA +FLG MYGG+V P+NL+SQP+QL +VL+HS ++LVF + + + A ++ I I V VIDVDA +F +P + E E+ ALLMYTSGTTG
Sbjct: 12 TVRHVIDAQAAERPEHLYLIAPETGRGITYARLREHSVALTRYLLGRGLNKGDKVSLMLHNGYQTARLFLGVMYGGFVVSPVNLLSQPTQLRHVLDHSDSKLVFVGADFEQRVRAMLKEIRRDIAVEVIDVDAEEIFDPAAVPQVLLPEVDEEDDALLMYTSGTTG 177
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Match: A0A3N5UL30_9DELT (Long-chain fatty acid--CoA ligase (Fragment) n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3N5UL30_9DELT) HSP 1 Score: 150 bits (379), Expect = 1.130e-41 Identity = 79/167 (47.31%), Postives = 109/167 (65.27%), Query Frame = 1
Query: 1 TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAPGDRIGFYCANGYQTAAVFLGTMYGGYVSVPLNLVSQPSQLEYVLEHSGTRLVFTDMEHAEALAARVEAIGGGIEVIVIDVDAPSLFLEDR-LPALEAVEPGEDMPALLMYTSGTTG 498
T+RH +D +A +PDK +++APE LT+A+L+ + L + LL G GD+I + +NGYQT +FLG MY G+V PLNL++QPSQLEYVL+HS T+LVF + E L A+ IE++ ID D+P +F +D L AL E E+ ALL+YTSGTTG
Sbjct: 3 TIRHYIDMRAEQQPDKVFMIAPEPELSLTYAQLREDSIELGKQLLKRGLNKGDKISYMLSNGYQTTKIFLGAMYSGFVIAPLNLLAQPSQLEYVLDHSDTKLVFFTEDQRERLEKASGALSREIELMEIDNDSPWIFPKDGDLAALRLPEVEEEDDALLLYTSGTTG 169 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6857.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6857.3.1 >prot_P-wetherbeei_contig6857.3.1 ID=prot_P-wetherbeei_contig6857.3.1|Name=mRNA_P-wetherbeei_contig6857.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp TVRHCVDRQARSRPDKTYLVAPETGRELTFAELKRQADNLCRFLLGAGYAback to top mRNA from alignment at P-wetherbeei_contig6857:2779..3276+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6857.3.1 ID=mRNA_P-wetherbeei_contig6857.3.1|Name=mRNA_P-wetherbeei_contig6857.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig6857:2779..3276+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6857:2779..3276+ >mRNA_P-wetherbeei_contig6857.3.1 ID=mRNA_P-wetherbeei_contig6857.3.1|Name=mRNA_P-wetherbeei_contig6857.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig6857:2779..3276+ (Phaeothamnion wetherbeei SAG_119_79)back to top |