mRNA_P-wetherbeei_contig6690.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Match: A0A077ZNL9_TRITR (Uncharacterized protein n=1 Tax=Trichuris trichiura TaxID=36087 RepID=A0A077ZNL9_TRITR) HSP 1 Score: 162 bits (410), Expect = 7.180e-47 Identity = 96/169 (56.80%), Postives = 107/169 (63.31%), Query Frame = 1
Query: 1 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRHCCLTGPLNLPAPGRSQSVYIVLQLRTDLCFYYGGILPSSLTMVLSIALVFST*SPESVWGTGGSLLARGF--SRQHRITHFTHTGSAS-NLRLHHQVRH---GRNFAGTGISTRCPSTTPVGLALGPDLPRAD 489
YAIRAG+NLPDKEFRYLR VIVT AVY GLNS LR CLT PLNLPAPGR Q +Y++ + DLCF YG LPSSLT +L +AL FS P SV GTG R F S R+ ++ A N RL + G F G GIST C STTP GLAL P LP AD
Sbjct: 83 YAIRAGQNLPDKEFRYLRTVIVTAAVYRGLNSMLR--CLTSPLNLPAPGRRQPIYVIFRFSIDLCFCYGVNLPSSLTTLLPLALGFSPHLPVSVCGTGTLAYLRAFLASEHRRLPYYISVPYAQLNQRLGSAISKCPSGLRFGGYGISTVCASTTPCGLALAPGLPWAD 249
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Match: A0A0K2YNZ4_9NOCA (Uncharacterized protein n=1 Tax=Rhodococcus sp. RD6.2 TaxID=260936 RepID=A0A0K2YNZ4_9NOCA) HSP 1 Score: 130 bits (327), Expect = 9.180e-37 Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 1
Query: 1 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRHCCLTGPLNLPAPGRSQSVYIVLQLRTDLCF 198
YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRH LTGPLNLPAPGR QSVYIVL+LRTDLCF
Sbjct: 8 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRHYWLTGPLNLPAPGRRQSVYIVLRLRTDLCF 73
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Match: K9IR67_DESRO (Putative conserved protein with signal anchor (Fragment) n=1 Tax=Desmodus rotundus TaxID=9430 RepID=K9IR67_DESRO) HSP 1 Score: 122 bits (305), Expect = 3.180e-33 Identity = 60/66 (90.91%), Postives = 62/66 (93.94%), Query Frame = 1
Query: 1 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRHCCLTGPLNLPAPGRSQSVYIVLQLRTDLCF 198
Y+IRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQL LTGPLNLPAPGRSQSVYIVL+LRTDLCF
Sbjct: 25 YSIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLXXX-LTGPLNLPAPGRSQSVYIVLRLRTDLCF 89
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Match: Q8CM04_COREF (Uncharacterized protein n=1 Tax=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) TaxID=196164 RepID=Q8CM04_COREF) HSP 1 Score: 119 bits (297), Expect = 5.560e-30 Identity = 86/184 (46.74%), Postives = 99/184 (53.80%), Query Frame = 1
Query: 1 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRHCC-LTGPLNLPAPGRSQSVYIVLQLRTDLCFYYGGILPSSLTMVLSI--------------------ALVFST*SPESV----------WGTGGSL-LARGFSRQHRITHFTH---TGSASNLRLHHQVRHGRNFAGTGISTRCPSTT 447
YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLR LTGPLNLPAPGR QSVYI + C + LPS L + A + SPE + G G ++ +ARGFSRQ+RIT FT T ASN+ +R+G F T T P +T
Sbjct: 8 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRRLTQLTGPLNLPAPGRRQSVYINFNVFARTCVFSKQSLPSILCDPHQLQKQIPSPVQAPLLPKLRGHFAEFLNHSSPERLSILYLTTCVGLGYGPNMHIARGFSRQYRITEFTPLRATHHASNI-----MRYG--FTNTSFHTLTPQST 184
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Match: W8YNE0_9BACL (Uncharacterized protein ORF91 n=1 Tax=Paenibacillus sp. P22 TaxID=483908 RepID=W8YNE0_9BACL) HSP 1 Score: 112 bits (279), Expect = 5.570e-29 Identity = 52/66 (78.79%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 1 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRHCCLTGPLNLPAPGRSQSVYIVLQLRTDLCF 198
YAIRAG+NLPDKEFRYLR VIVT AVYWG SQLR C LT PLNLPAPGR Q VY L+LRT LCF
Sbjct: 47 YAIRAGQNLPDKEFRYLRTVIVTAAVYWGFGSQLRDCSLTAPLNLPAPGRRQPVYFALRLRTGLCF 112
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Match: Q79VK1_COREF (Uncharacterized protein n=1 Tax=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) TaxID=196164 RepID=Q79VK1_COREF) HSP 1 Score: 105 bits (261), Expect = 7.760e-27 Identity = 53/59 (89.83%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 1 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRHCC-LTGPLNLPAPGRSQSVYIVL 174
YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLR LTGPLNLPAPGR QSVYI L
Sbjct: 8 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRRLTQLTGPLNLPAPGRRQSVYINL 66
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Match: A0A0B0HC60_9BACL (Uncharacterized protein n=1 Tax=Paenibacillus sp. P1XP2 TaxID=1472719 RepID=A0A0B0HC60_9BACL) HSP 1 Score: 103 bits (258), Expect = 6.860e-25 Identity = 65/124 (52.42%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 1 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRHCCLTGPLNLPAPGRSQSVYIVLQLRTDLCFY--------------------------YGGILPSSLTMVLSIALVFST*SPESVWGTG 294
YAIRAG+NLPDKEFRYLR VIVT AVYWG SQLR LT PLNLPAPGR Q Y C + YG ILPSSLT VL AL FS+ P SV GTG
Sbjct: 55 YAIRAGQNLPDKEFRYLRTVIVTAAVYWGFGSQLRSYSLTAPLNLPAPGRRQP-YTSPYGFAQTCVFAKQSLGPFHCGPLVLFTLPGHPFSRSYGVILPSSLTRVLPRALEFSSRLPVSVCGTG 177
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Match: A7A2I7_BIFAD (Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 TaxID=411481 RepID=A7A2I7_BIFAD) HSP 1 Score: 100 bits (248), Expect = 1.440e-24 Identity = 50/67 (74.63%), Postives = 53/67 (79.10%), Query Frame = 1
Query: 1 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRHCCLTGPLNLPAPGRSQSVYIVLQLRTDLCFY 201
YAIRAGRNLPDKEFRYLRMVIVTTAVY GLNS L LT PLNLPAPGR Q +Y +LR LCF+
Sbjct: 25 YAIRAGRNLPDKEFRYLRMVIVTTAVYRGLNSPLHPEGLTDPLNLPAPGRRQCIYSGFRLRMHLCFW 91
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Match: UPI0019932E9C (Uncharacterized protein n=1 Tax=Nocardioides deserti TaxID=1588644 RepID=UPI0019932E9C) HSP 1 Score: 98.6 bits (244), Expect = 2.020e-24 Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = -2
Query: 204 KWVILCCREKPLASNEPPVPQTDSGDQVENTKAIERTMVKELGKMPP 344
KW+ILCCREKPLAS EPPVPQTDSGDQVENTKAIERTMVKELGKMPP
Sbjct: 7 KWMILCCREKPLASYEPPVPQTDSGDQVENTKAIERTMVKELGKMPP 53
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Match: B0MGJ9_ANACD (Uncharacterized protein n=2 Tax=Anaerostipes caccae (strain DSM 14662 / CCUG 47493 / JCM 13470 / NCIMB 13811 / L1-92) TaxID=411490 RepID=B0MGJ9_ANACD) HSP 1 Score: 100 bits (249), Expect = 2.580e-24 Identity = 47/66 (71.21%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 1 YAIRAGRNLPDKEFRYLRMVIVTTAVYWGLNSQLRHCCLTGPLNLPAPGRSQSVYIVLQLRTDLCF 198
YA RAGRNLPDKEFRYLR VIVT AVYWGL+S LR L+ PLNLPAPGR Q +Y L+ DLCF
Sbjct: 58 YAFRAGRNLPDKEFRYLRTVIVTAAVYWGLSSDLRANALSPPLNLPAPGRRQPIYFTLRFCIDLCF 123 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6690.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6690.4.1 >prot_P-wetherbeei_contig6690.4.1 ID=prot_P-wetherbeei_contig6690.4.1|Name=mRNA_P-wetherbeei_contig6690.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=71bp MVIVTTAVYWGLNSQLRHCCLTGPLNLPAPGRSQSVYIVLQLRTDLCFYYback to top mRNA from alignment at P-wetherbeei_contig6690:2569..3336- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6690.4.1 ID=mRNA_P-wetherbeei_contig6690.4.1|Name=mRNA_P-wetherbeei_contig6690.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig6690:2569..3336- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6690:2569..3336- >mRNA_P-wetherbeei_contig6690.4.1 ID=mRNA_P-wetherbeei_contig6690.4.1|Name=mRNA_P-wetherbeei_contig6690.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig6690:2569..3336- (Phaeothamnion wetherbeei SAG_119_79)back to top |