mRNA_P-wetherbeei_contig66.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Match: D8LNP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP5_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 3.710e-14 Identity = 37/81 (45.68%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 1 LAQRLATADLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRCKTVRKQGCVFELAVGDCICSLQGSLMVGRQ 243
L QR+ +ADLQG Y+ V+RA+A+S + VAG+V+RE NTF+LVTP ++ T+ K+ C LA D + +L G ++GR+
Sbjct: 105 LQQRILSADLQGCYLTVSRASASSLVNVAGIVLREAANTFQLVTPAGKTL--TIPKRSCAVRLAFADRVVTLDGGALMGRR 183
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Match: A0A6H5K6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H7_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 4.520e-12 Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 1
Query: 1 LAQRLATADLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRCKTVRKQGCVFELAVGDCICSLQGSLMVGRQ 243
L QR +A+LQG Y+ V+RA+ +S + VAG+V+RETVN F+LVTP + T+ K+ C LA GD + + G ++GR+
Sbjct: 1222 LQQRTLSAELQGCYLTVSRASVSSLVNVAGIVLRETVNIFQLVTPA--GKMLTIPKRSCAVRLAFGDRMVTRNGGTLMGRR 1300
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Match: A0A1Y1IMU1_KLENI (Ribonuclease P family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMU1_KLENI) HSP 1 Score: 59.3 bits (142), Expect = 1.500e-8 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 1 LAQRLATADLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRCKTVRKQGCVFELAVGDCICSLQGSLMV 234
L RL TAD GA++ V+ + +YIG G+++RET NTF++VT ++R + V K+G +F++ +G+ + SL G+ +V
Sbjct: 180 LMSRLLTADYHGAFLSVSASKDPTYIGTEGLIVRETQNTFQMVTT--QNRLQVVPKRGSIFQMKLGNNLVSLFGNQIV 255
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Match: A0A6A7C131_9PEZI (Ribonuclease P protein subunit n=1 Tax=Piedraia hortae CBS 480.64 TaxID=1314780 RepID=A0A6A7C131_9PEZI) HSP 1 Score: 54.7 bits (130), Expect = 4.400e-7 Identity = 25/70 (35.71%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 13 LATADLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRCKTVRKQGCVFELAVGDCICSLQG 222
L TAD GA + V ++ S +G+ G+V+++T+ TFE+VT + + K + K+G +F + +G+C+ L G
Sbjct: 119 LLTADYHGALITVVKSTCPSRVGIRGIVVKDTMFTFEVVTK--KDQLKVLPKEGSIFRVIIGECVVELNG 186
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Match: A0A2G8KGC1_STIJA (Ribonuclease P protein subunit p29 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KGC1_STIJA) HSP 1 Score: 52.4 bits (124), Expect = 3.130e-6 Identity = 24/71 (33.80%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 10 RLATADLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRCKTVRKQGCVFELAVGDCICSLQG 222
+L DL G++M+V ++ +YIG+ G++++ET NTF+++T + KTV K C F V + + ++ G
Sbjct: 113 KLLKCDLHGSFMKVTKSTCPTYIGMCGILLQETKNTFKIITQA--DQLKTVPKANCEFTFVVDELVVTIHG 181
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Match: A0A6B2LNY3_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LNY3_9EUKA) HSP 1 Score: 50.8 bits (120), Expect = 3.280e-6 Identity = 28/80 (35.00%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 1 LAQRLATADLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRCKTVRKQGCVFELAVGDCICSLQGSLMVGR 240
L +L AD G + V ++ S +G+ G+VI+ET NTF+L+T + K V K+ VF + +C+L G+L + R
Sbjct: 21 LKAKLTRADFHGCILSVIKSQTPSSVGITGIVIKETQNTFQLITK--ENTLKVVMKRDTVFTFVYENNLCTLYGNLFLVR 98
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Match: A0A2G8KG20_STIJA (Ribonuclease P protein subunit p29 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KG20_STIJA) HSP 1 Score: 52.4 bits (124), Expect = 3.450e-6 Identity = 24/71 (33.80%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 10 RLATADLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRCKTVRKQGCVFELAVGDCICSLQG 222
+L DL G++M+V ++ +YIG+ G++++ET NTF+++T + KTV K C F V + + ++ G
Sbjct: 124 KLLKCDLHGSFMKVTKSTCPTYIGMCGILLQETKNTFKIITQT--DQLKTVPKANCEFTFVVDELVVTIHG 192
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Match: J9M4K8_ACYPI (Ribonuclease P protein subunit p29 n=8 Tax=Aphidinae TaxID=133076 RepID=J9M4K8_ACYPI) HSP 1 Score: 51.6 bits (122), Expect = 7.140e-6 Identity = 30/72 (41.67%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 25 DLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRCKTVRKQGCVFELAVGDCICSLQGSLMVGR 240
D GA+++V + SYI VAGV+I ET NTF+++ ++ KTV K C+FEL I L G V R
Sbjct: 140 DFHGAHIKVVSSKCCSYISVAGVIILETKNTFQIIGVD--NKLKTVPKDQCIFELEFEGYIIQLYGKHFVVR 209
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Match: UPI0014584726 (ribonuclease P protein subunit p29-like isoform X1 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI0014584726) HSP 1 Score: 51.6 bits (122), Expect = 7.550e-6 Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 7 QRLATADLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRCKTVRKQGCVFELAVGD 201
QRL ADL G+ + V R+ SY+GV G++++ET NTF L+T + +C + KQ VF +G
Sbjct: 143 QRLLKADLHGSLLTVQRSKCPSYVGVTGIILQETRNTFLLITKENKVKC--IPKQHSVFTFMLGS 205
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Match: A0A7J4B3P9_9ARCH (Ribonuclease P protein component 1 n=1 Tax=Candidatus Micrarchaeota archaeon TaxID=2250274 RepID=A0A7J4B3P9_9ARCH) HSP 1 Score: 48.9 bits (115), Expect = 1.190e-5 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 25 DLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRCKTVRKQGCVFELAVGD 201
++ G ++V +A+ SYIG++GVV+ ET+NTF + TP + K V K+ CVFE + D
Sbjct: 11 EIIGLKVKVVSSASKSYIGISGVVLDETLNTFVIETP--ERKLKRVPKKNCVFEFTLPD 67 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig66.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig66.4.1 >prot_P-wetherbeei_contig66.4.1 ID=prot_P-wetherbeei_contig66.4.1|Name=mRNA_P-wetherbeei_contig66.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp LAQRLATADLQGAYMRVARAAAASYIGVAGVVIRETVNTFELVTPPPRSRback to top mRNA from alignment at P-wetherbeei_contig66:15321..15563- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig66.4.1 ID=mRNA_P-wetherbeei_contig66.4.1|Name=mRNA_P-wetherbeei_contig66.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig66:15321..15563- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig66:15321..15563- >mRNA_P-wetherbeei_contig66.4.1 ID=mRNA_P-wetherbeei_contig66.4.1|Name=mRNA_P-wetherbeei_contig66.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig66:15321..15563- (Phaeothamnion wetherbeei SAG_119_79)back to top |