mRNA_P-wetherbeei_contig6564.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A812NL42_9DINO (EEF2KMT protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NL42_9DINO) HSP 1 Score: 80.5 bits (197), Expect = 5.950e-14 Identity = 96/243 (39.51%), Postives = 115/243 (47.33%), Query Frame = 1
Query: 1 LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALN-----LHPGAEGSGIRQGNGGGGNSDSCGASSDGNQXXXXXXXXXXXXXXXXXXXXXXXXXXXPD------NCGGGSSRWNPSGVPAL---AAGGRFDVIIAADFIYQPSDAVGALRVLRNFLRPGGAAHFLVPAPRNRFGTEALPRLLAEEGWRFESHAVADLRLLDGIEEAAYHTW----TRFLVHGAPQPPLE 675
L+G+ VLEIGAG+GLTG++AA A L+DFN VL NL RN ALN P + + + G G D XXXXXXXXXXXXXXXX D + GS + PA A+ GRFD +IA D + SD G RV LRPGG A F V P RFGTE L L G VA + G EAA T R +++ A +PP E
Sbjct: 223 LSGRDVLEIGAGMGLTGIVAAGQARRAVLSDFNWAVLCNLRRNIALNGGELCFEPAVATAKVGAEDEGAGQVDXXXXXXXXXXXXXXXXXXXXXXXXXXAGRSNALRDGLVDAQWLDWDALPGSESPRTASCPADFDDASSGRFDAVIATDMVISLSDCRGVARVCATCLRPGGFAVFAVAPPDVRFGTEHLGPALEAAGLAVTKQTVAPRFAVSGGGEAAAATGGGYEARIVMYCAVKPPAE 465
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A5A8D717_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D717_CAFRO) HSP 1 Score: 71.2 bits (173), Expect = 6.260e-11 Identity = 103/261 (39.46%), Postives = 121/261 (46.36%), Query Frame = 1
Query: 1 LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALN-----LHPGAEGSGIRQGNGGGGNSDSCGASSDGNQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDNCGGGSSRWNP------------------------SGVPAL---AAGGRFDVIIAADFIYQPSDAVGALRVLRNFLRPGGAAHFLVPAPRNRFGTEALPRLLAEEGWRFESHAVADLRLLDGIEEAAYHTW----TRFLVHGAPQPPLE 675
L+G+ VLEIGAG+GLTG++AA A L+DFN VL NL RN ALN P S +G + XXXXXXXXXXXXXXXXXXXXXXXXXX + R N + PA A+ GRFD +IA D + SD G RV LR GG A F V P RFGTE L L G VA + G EAA T R +++ A +PP E
Sbjct: 98 LSGRDVLEIGAGMGLTGIVAAGQARRAVLSDFNWAVLCNLRRNIALNGGELCFEPAVA------------------TSKEGAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRSNALRDGLVDAQWLDWDALPGSESPRTASCPADFDDASSGRFDAVIATDMVISLSDCRGVARVCATCLRAGGFAVFAVAPPDVRFGTEHLGPALEAAGLAVTKQTVAPRFAVSGGGEAAAATGGGYEARIVMYCAVKPPAE 340
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A4Z1SZ50_GIAMU (Methyltransferase n=1 Tax=Giardia muris TaxID=5742 RepID=A0A4Z1SZ50_GIAMU) HSP 1 Score: 61.6 bits (148), Expect = 1.290e-7 Identity = 72/235 (30.64%), Postives = 92/235 (39.15%), Query Frame = 1
Query: 1 LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALN-----------LHPGAEGSGIR---QGNGGGGNSDSCGASSDGNQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDNCGGGSSRWNPSGVPALAAGGRFDVIIAADFIYQPSDAVGALRVLRNFLRPGGAAHFLVPAPRNRFGTEALPRLLAEEGWRFESHAVADLRLLDGIEEAA-------YHTWTRF 642
L GKRVLE+G+GVGLTGL+A+ F+ EV LTD++ +L NLE N LN + P + R QG A S + P N G R P GV A GRF +II ++ YQ S V+ FL GG ++ R G L+ E GW E+ DL L D I+ Y WT F
Sbjct: 75 LQGKRVLELGSGVGLTGLIASRFSDEVVLTDYSESILENLEYNIWLNAADLTNEHLDDIFPEDRDAQARFRTQGQ----------AISRAAKVAYLDWFHPMLSEKPVESFESDTNRKLPLN---GFRRRVPGGV----ALGRFPMIIGSELTYQLSGVEELAEVIDIFLEEGGVFFEILSIYRGP-GPRRFMELMEENGWVVEARE-PDLGLCDNIDSVQSRNRNERYLFWTLF 290
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A7S1TRJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRJ2_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 6.620e-7 Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 1 LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALNLHPGAEGSGIR 174
+AGK VLEIGAG+GL G A AA V L+D+N VL NL NAALN A+ G++
Sbjct: 171 VAGKAVLEIGAGLGLAGFAAVPHAAHVTLSDYNDEVLENLRYNAALNFEARAQAPGLK 228
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A7S3KYL4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KYL4_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 9.870e-7 Identity = 62/212 (29.25%), Postives = 79/212 (37.26%), Query Frame = 1
Query: 13 RVLEIGAGVGLTGLLAAFF----------AAEVC----------LTDFNPRVLRNLERNAALNLHPGAEGSGIRQGNGGGGNSDSCGASSDGNQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDNCGGGSSRWNPSGVPALAAGGRFDVIIAADFIYQPSDAVGALRVLRNFLRPGGAAHFLVPAPRNRFGTEALPRLLAEEGWRFESHAVAD 588
R+LEIGAG GL GLLAA A +C L+DFN VL NLERN ALN D C G + W A A DVI+AAD I QPSDA+ A + + L+PGG A+ + +RFG + R G + +S +VA+
Sbjct: 231 RILEIGAGCGLVGLLAARVVQKQRCMQTRATSICTNDAIPCDLLLSDFNRTVLDNLERNIALNEVE-----------------DIC----------------------------HTVGLDFYQQTGTSQNGWKDMEGHAQAP---VDVILAADMICQPSDALYAANTIHDALKPGGQAYVVCADSAHRFGVDHFARECNRVGLQLKSCSVAE 394
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A8BQA4_GIAIC (Methyltransferase n=2 Tax=Giardia intestinalis TaxID=5741 RepID=A8BQA4_GIAIC) HSP 1 Score: 57.8 bits (138), Expect = 2.660e-6 Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALNLH 147
L+GK VLE+G+GVGLTGL+AA +A ++ LTD++ +L NLE N LN++
Sbjct: 78 LSGKVVLELGSGVGLTGLVAARYAEKIYLTDYSTSILENLEYNLWLNVN 126
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A7S1U585_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U585_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 4.680e-6 Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 4 AGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALNLHPG 153
AG+RV E+GAG GL+GL+A+ FAA CLTD V+R LERNAAL G
Sbjct: 82 AGRRVAELGAGCGLSGLVASQFAAGTCLTDGVDVVVRLLERNAALQKESG 131
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A6H5JKR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKR7_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 4.830e-6 Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 1 LAGKRVLEIGAGVGLTGLLAAFF--AAEVCLTDFNPRVLRNLERNAALN 141
L GKRVLE+GAG+G+TG+ A AAEV LTD+ PRVL NL N +N
Sbjct: 12 LRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEIN 60
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: D7FXM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM3_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 6.420e-6 Identity = 33/63 (52.38%), Postives = 40/63 (63.49%), Query Frame = 1
Query: 1 LAGKRVLEIGAGVGLTGLLAAFF--AAEVCLTDFNPRVLRNLERNAALNLHPGAEGSGIRQGN 183
L GKRVLE+GAG+G+TG+ A AAEV LTD+ PRVL NL N +N G+G GN
Sbjct: 191 LRGKRVLELGAGIGMTGMAVAATCGAAEVVLTDYAPRVLANLHHNLEINRALLEAGAGQSNGN 253
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A132NRG1_GIAIN (Methyltransferase n=3 Tax=Giardia intestinalis TaxID=5741 RepID=A0A132NRG1_GIAIN) HSP 1 Score: 56.2 bits (134), Expect = 8.920e-6 Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 10 KRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALNLH 147
KR+LE+G+GVGLTG++AA +A V LTD++ +L NLE N LN++
Sbjct: 81 KRILELGSGVGLTGMVAARYAKRVYLTDYSTSILENLEYNLWLNVN 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6564.1.1 >prot_P-wetherbeei_contig6564.1.1 ID=prot_P-wetherbeei_contig6564.1.1|Name=mRNA_P-wetherbeei_contig6564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALNLHPback to top mRNA from alignment at P-wetherbeei_contig6564:1949..3088+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6564.1.1 ID=mRNA_P-wetherbeei_contig6564.1.1|Name=mRNA_P-wetherbeei_contig6564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1140bp|location=Sequence derived from alignment at P-wetherbeei_contig6564:1949..3088+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6564:1949..3088+ >mRNA_P-wetherbeei_contig6564.1.1 ID=mRNA_P-wetherbeei_contig6564.1.1|Name=mRNA_P-wetherbeei_contig6564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig6564:1949..3088+ (Phaeothamnion wetherbeei SAG_119_79)back to top |