mRNA_P-wetherbeei_contig6564.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6564.1.1
Unique NamemRNA_P-wetherbeei_contig6564.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A812NL42_9DINO (EEF2KMT protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NL42_9DINO)

HSP 1 Score: 80.5 bits (197), Expect = 5.950e-14
Identity = 96/243 (39.51%), Postives = 115/243 (47.33%), Query Frame = 1
Query:    1 LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALN-----LHPGAEGSGIRQGNGGGGNSDSCGASSDGNQXXXXXXXXXXXXXXXXXXXXXXXXXXXPD------NCGGGSSRWNPSGVPAL---AAGGRFDVIIAADFIYQPSDAVGALRVLRNFLRPGGAAHFLVPAPRNRFGTEALPRLLAEEGWRFESHAVADLRLLDGIEEAAYHTW----TRFLVHGAPQPPLE 675
            L+G+ VLEIGAG+GLTG++AA  A    L+DFN  VL NL RN ALN       P    + +   + G G  D          XXXXXXXXXXXXXXXX            D      +   GS     +  PA    A+ GRFD +IA D +   SD  G  RV    LRPGG A F V  P  RFGTE L   L   G       VA    + G  EAA  T      R +++ A +PP E
Sbjct:  223 LSGRDVLEIGAGMGLTGIVAAGQARRAVLSDFNWAVLCNLRRNIALNGGELCFEPAVATAKVGAEDEGAGQVDXXXXXXXXXXXXXXXXXXXXXXXXXXAGRSNALRDGLVDAQWLDWDALPGSESPRTASCPADFDDASSGRFDAVIATDMVISLSDCRGVARVCATCLRPGGFAVFAVAPPDVRFGTEHLGPALEAAGLAVTKQTVAPRFAVSGGGEAAAATGGGYEARIVMYCAVKPPAE 465          
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A5A8D717_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D717_CAFRO)

HSP 1 Score: 71.2 bits (173), Expect = 6.260e-11
Identity = 103/261 (39.46%), Postives = 121/261 (46.36%), Query Frame = 1
Query:    1 LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALN-----LHPGAEGSGIRQGNGGGGNSDSCGASSDGNQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDNCGGGSSRWNP------------------------SGVPAL---AAGGRFDVIIAADFIYQPSDAVGALRVLRNFLRPGGAAHFLVPAPRNRFGTEALPRLLAEEGWRFESHAVADLRLLDGIEEAAYHTW----TRFLVHGAPQPPLE 675
            L+G+ VLEIGAG+GLTG++AA  A    L+DFN  VL NL RN ALN       P                      S +G + XXXXXXXXXXXXXXXXXXXXXXXXXX       + R N                         +  PA    A+ GRFD +IA D +   SD  G  RV    LR GG A F V  P  RFGTE L   L   G       VA    + G  EAA  T      R +++ A +PP E
Sbjct:   98 LSGRDVLEIGAGMGLTGIVAAGQARRAVLSDFNWAVLCNLRRNIALNGGELCFEPAVA------------------TSKEGAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRSNALRDGLVDAQWLDWDALPGSESPRTASCPADFDDASSGRFDAVIATDMVISLSDCRGVARVCATCLRAGGFAVFAVAPPDVRFGTEHLGPALEAAGLAVTKQTVAPRFAVSGGGEAAAATGGGYEARIVMYCAVKPPAE 340          
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A4Z1SZ50_GIAMU (Methyltransferase n=1 Tax=Giardia muris TaxID=5742 RepID=A0A4Z1SZ50_GIAMU)

HSP 1 Score: 61.6 bits (148), Expect = 1.290e-7
Identity = 72/235 (30.64%), Postives = 92/235 (39.15%), Query Frame = 1
Query:    1 LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALN-----------LHPGAEGSGIR---QGNGGGGNSDSCGASSDGNQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDNCGGGSSRWNPSGVPALAAGGRFDVIIAADFIYQPSDAVGALRVLRNFLRPGGAAHFLVPAPRNRFGTEALPRLLAEEGWRFESHAVADLRLLDGIEEAA-------YHTWTRF 642
            L GKRVLE+G+GVGLTGL+A+ F+ EV LTD++  +L NLE N  LN           + P    +  R   QG           A S   +                           P N   G  R  P GV    A GRF +II ++  YQ S       V+  FL  GG    ++   R   G      L+ E GW  E+    DL L D I+          Y  WT F
Sbjct:   75 LQGKRVLELGSGVGLTGLIASRFSDEVVLTDYSESILENLEYNIWLNAADLTNEHLDDIFPEDRDAQARFRTQGQ----------AISRAAKVAYLDWFHPMLSEKPVESFESDTNRKLPLN---GFRRRVPGGV----ALGRFPMIIGSELTYQLSGVEELAEVIDIFLEEGGVFFEILSIYRGP-GPRRFMELMEENGWVVEARE-PDLGLCDNIDSVQSRNRNERYLFWTLF 290          
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A7S1TRJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRJ2_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 6.620e-7
Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1
Query:    1 LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALNLHPGAEGSGIR 174
            +AGK VLEIGAG+GL G  A   AA V L+D+N  VL NL  NAALN    A+  G++
Sbjct:  171 VAGKAVLEIGAGLGLAGFAAVPHAAHVTLSDYNDEVLENLRYNAALNFEARAQAPGLK 228          
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A7S3KYL4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KYL4_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 9.870e-7
Identity = 62/212 (29.25%), Postives = 79/212 (37.26%), Query Frame = 1
Query:   13 RVLEIGAGVGLTGLLAAFF----------AAEVC----------LTDFNPRVLRNLERNAALNLHPGAEGSGIRQGNGGGGNSDSCGASSDGNQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDNCGGGSSRWNPSGVPALAAGGRFDVIIAADFIYQPSDAVGALRVLRNFLRPGGAAHFLVPAPRNRFGTEALPRLLAEEGWRFESHAVAD 588
            R+LEIGAG GL GLLAA            A  +C          L+DFN  VL NLERN ALN                    D C                                       G   + W      A A     DVI+AAD I QPSDA+ A   + + L+PGG A+ +     +RFG +   R     G + +S +VA+
Sbjct:  231 RILEIGAGCGLVGLLAARVVQKQRCMQTRATSICTNDAIPCDLLLSDFNRTVLDNLERNIALNEVE-----------------DIC----------------------------HTVGLDFYQQTGTSQNGWKDMEGHAQAP---VDVILAADMICQPSDALYAANTIHDALKPGGQAYVVCADSAHRFGVDHFARECNRVGLQLKSCSVAE 394          
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A8BQA4_GIAIC (Methyltransferase n=2 Tax=Giardia intestinalis TaxID=5741 RepID=A8BQA4_GIAIC)

HSP 1 Score: 57.8 bits (138), Expect = 2.660e-6
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 1
Query:    1 LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALNLH 147
            L+GK VLE+G+GVGLTGL+AA +A ++ LTD++  +L NLE N  LN++
Sbjct:   78 LSGKVVLELGSGVGLTGLVAARYAEKIYLTDYSTSILENLEYNLWLNVN 126          
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A7S1U585_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U585_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.680e-6
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query:    4 AGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALNLHPG 153
            AG+RV E+GAG GL+GL+A+ FAA  CLTD    V+R LERNAAL    G
Sbjct:   82 AGRRVAELGAGCGLSGLVASQFAAGTCLTDGVDVVVRLLERNAALQKESG 131          
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A6H5JKR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKR7_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 4.830e-6
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1
Query:    1 LAGKRVLEIGAGVGLTGLLAAFF--AAEVCLTDFNPRVLRNLERNAALN 141
            L GKRVLE+GAG+G+TG+  A    AAEV LTD+ PRVL NL  N  +N
Sbjct:   12 LRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEIN 60          
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: D7FXM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM3_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 6.420e-6
Identity = 33/63 (52.38%), Postives = 40/63 (63.49%), Query Frame = 1
Query:    1 LAGKRVLEIGAGVGLTGLLAAFF--AAEVCLTDFNPRVLRNLERNAALNLHPGAEGSGIRQGN 183
            L GKRVLE+GAG+G+TG+  A    AAEV LTD+ PRVL NL  N  +N      G+G   GN
Sbjct:  191 LRGKRVLELGAGIGMTGMAVAATCGAAEVVLTDYAPRVLANLHHNLEINRALLEAGAGQSNGN 253          
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Match: A0A132NRG1_GIAIN (Methyltransferase n=3 Tax=Giardia intestinalis TaxID=5741 RepID=A0A132NRG1_GIAIN)

HSP 1 Score: 56.2 bits (134), Expect = 8.920e-6
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 1
Query:   10 KRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALNLH 147
            KR+LE+G+GVGLTG++AA +A  V LTD++  +L NLE N  LN++
Sbjct:   81 KRILELGSGVGLTGMVAARYAKRVYLTDYSTSILENLEYNLWLNVN 126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6564.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812NL42_9DINO5.950e-1439.51EEF2KMT protein n=1 Tax=Symbiodinium sp. KB8 TaxID... [more]
A0A5A8D717_CAFRO6.260e-1139.46Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A4Z1SZ50_GIAMU1.290e-730.64Methyltransferase n=1 Tax=Giardia muris TaxID=5742... [more]
A0A7S1TRJ2_9STRA6.620e-753.45Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3KYL4_9STRA9.870e-729.25Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A8BQA4_GIAIC2.660e-655.10Methyltransferase n=2 Tax=Giardia intestinalis Tax... [more]
A0A7S1U585_9STRA4.680e-660.00Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6H5JKR7_9PHAE4.830e-659.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXM3_ECTSI6.420e-652.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A132NRG1_GIAIN8.920e-654.35Methyltransferase n=3 Tax=Giardia intestinalis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6564contigP-wetherbeei_contig6564:1949..3088 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2903.EOD26803
PFAMsMethyltransf_16,SEP,UBA_4,UBX
Model size675
Max annot lvl2759|Eukaryota
KEGG koko:K11863,ko:K14012,ko:K21805
KEGG Pathwayko04141,map04141
Hectar predicted targeting categorysignal peptide
GOsGO:0000045,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006508,GO:0006511,GO:0006807,GO:0006914,GO:0006996,GO:0006997,GO:0006998,GO:0007030,GO:0007033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010256,GO:0010498,GO:0010921,GO:0016043,GO:0016236,GO:0019208,GO:0019220,GO:0019222,GO:0019538,GO:0019888,GO:0019941,GO:0022607,GO:0030163,GO:0030234,GO:0031323,GO:0031399,GO:0031468,GO:0032182,GO:0032268,GO:0035303,GO:0035304,GO:0043130,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0043666,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051174,GO:0051246,GO:0051336,GO:0051603,GO:0060255,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071840,GO:0080090,GO:0098772,GO:1901564,GO:1901565,GO:1901575,GO:1905037
Exons2
Evalue3.9e-07
EggNOG OGsKOG2086@1|root,KOG2793@1|root,KOG2086@2759|Eukaryota,KOG2793@2759|Eukaryota
Descriptionlysine N-methyltransferase activity
Cds size675
COG categoryS
BRITEko00000,ko00001,ko01000,ko01002,ko03110,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186922.5434754-CDS-P-wetherbeei_contig6564:1948..21101683186922.5434754-CDS-P-wetherbeei_contig6564:1948..2110Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6564 1949..2110 +
1683186922.554371-CDS-P-wetherbeei_contig6564:2575..30881683186922.554371-CDS-P-wetherbeei_contig6564:2575..3088Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6564 2576..3088 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6564.1.1prot_P-wetherbeei_contig6564.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6564 1949..3088 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6564.1.1

>prot_P-wetherbeei_contig6564.1.1 ID=prot_P-wetherbeei_contig6564.1.1|Name=mRNA_P-wetherbeei_contig6564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp
LAGKRVLEIGAGVGLTGLLAAFFAAEVCLTDFNPRVLRNLERNAALNLHP
GAEGSGIRQGNGGGGNSDSCGASSDGNQDGSNDHGSSSAGGGSCGGGDSG
GSDGGPDNCGGGSSRWNPSGVPALAAGGRFDVIIAADFIYQPSDAVGALR
VLRNFLRPGGAAHFLVPAPRNRFGTEALPRLLAEEGWRFESHAVADLRLL
DGIEEAAYHTWTRFLVHGAPQPPLE
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mRNA from alignment at P-wetherbeei_contig6564:1949..3088+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6564.1.1 ID=mRNA_P-wetherbeei_contig6564.1.1|Name=mRNA_P-wetherbeei_contig6564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1140bp|location=Sequence derived from alignment at P-wetherbeei_contig6564:1949..3088+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGCCGGAAAGCGCGTTTTGGAAATCGGTGCCGGCGTGGGGTTGACAGG GTTGCTGGCTGCCTTTTTCGCCGCCGAAGTTTGCCTGACGGACTTCAACC CGCGCGTGCTGCGCAACCTTGAGAGAAATGCGGCGCTCAACTTGCACCCG GGCGCCGAAGGGGTCGCCAGGCAAGAAATTTCTTCGCACTTCTCTTTTCG ACTTTTAGCTTGCCTTCTCGATCGCAACGACAGCCGTATGTCCCTTTTTA ATTTCAAAAAACCTTGCTGTTTGTCGCTTGCCTGCTGCTGTGTGCCGATC ACAATTGACTTCTGTTGGCTCCCTCTTATTCCTACCCCCCCCCTGCGGAA CATGGCGGGTTGGTTTCTTTCGGCGGTGTCCGTTTCCAAACTTTTCAGAA AAGTCGCCGTCCACACGGGAGCGCTCAGCGTGCGCTTTCTCGACTGGGAT CAGCTTCCATTAGTTTCCCGATCGACTTCGTTGGCGACTGGAACTGCCAC GGTTCCCGACAAAGGAGGAGGCCCGTGCGAACGCGGCGAAGCTGCGGCTC TGGCGAGCGAAGCATGTCGAGGCGAGCATGGCGCCGGCGCCAGCTCTGGG ACTGGCGCCTGCCGCAGCGGCGTTAAGAGTGGCATCCGCCAGGGAAACGG TGGTGGCGGGAACAGCGACAGTTGCGGAGCTAGCAGCGACGGTAACCAAG ATGGCAGCAACGACCATGGAAGCAGCAGTGCCGGCGGCGGCAGCTGCGGT GGCGGCGACAGCGGCGGCAGCGACGGCGGTCCTGACAACTGCGGCGGCGG CAGCAGCAGGTGGAATCCAAGCGGTGTCCCAGCTCTCGCCGCAGGCGGAC GCTTTGACGTCATCATCGCAGCCGACTTCATCTACCAGCCTTCCGATGCC GTCGGCGCCCTCCGCGTGCTGCGCAACTTCCTGCGGCCCGGCGGCGCCGC CCACTTCCTGGTGCCAGCGCCCCGCAACCGCTTCGGCACCGAGGCGCTGC CGCGGCTGCTGGCAGAAGAAGGATGGCGCTTTGAGAGCCATGCGGTGGCC GACCTGCGGCTGCTCGACGGGATCGAGGAGGCGGCCTACCACACCTGGAC GCGGTTTCTGGTACACGGAGCGCCACAGCCGCCGCTGGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6564:1949..3088+

>mRNA_P-wetherbeei_contig6564.1.1 ID=mRNA_P-wetherbeei_contig6564.1.1|Name=mRNA_P-wetherbeei_contig6564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig6564:1949..3088+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGCCGGAAAGCGCGTTTTGGAAATCGGTGCCGGCGTGGGGTTGACAGG
GTTGCTGGCTGCCTTTTTCGCCGCCGAAGTTTGCCTGACGGACTTCAACC
CGCGCGTGCTGCGCAACCTTGAGAGAAATGCGGCGCTCAACTTGCACCCG
GGCGCCGAAGGGAGTGGCATCCGCCAGGGAAACGGTGGTGGCGGGAACAG
CGACAGTTGCGGAGCTAGCAGCGACGGTAACCAAGATGGCAGCAACGACC
ATGGAAGCAGCAGTGCCGGCGGCGGCAGCTGCGGTGGCGGCGACAGCGGC
GGCAGCGACGGCGGTCCTGACAACTGCGGCGGCGGCAGCAGCAGGTGGAA
TCCAAGCGGTGTCCCAGCTCTCGCCGCAGGCGGACGCTTTGACGTCATCA
TCGCAGCCGACTTCATCTACCAGCCTTCCGATGCCGTCGGCGCCCTCCGC
GTGCTGCGCAACTTCCTGCGGCCCGGCGGCGCCGCCCACTTCCTGGTGCC
AGCGCCCCGCAACCGCTTCGGCACCGAGGCGCTGCCGCGGCTGCTGGCAG
AAGAAGGATGGCGCTTTGAGAGCCATGCGGTGGCCGACCTGCGGCTGCTC
GACGGGATCGAGGAGGCGGCCTACCACACCTGGACGCGGTTTCTGGTACA
CGGAGCGCCACAGCCGCCGCTGGAA
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