mRNA_P-wetherbeei_contig6525.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Match: A0A835YPT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.120e-20 Identity = 40/67 (59.70%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 19 YGVTFNAGRTAYYFNLEYLTVDVDHNYEIWWVQRTMYNYIVRKRKAFTVSSPDCNFDEVNNQYFPYA 219
Y VTFN GRT Y F +++ +++D+NYE+WWVQRT +V+KRK FTV++P C FD VNNQYFPYA
Sbjct: 387 YRVTFNGGRTDYAFEPQHVALELDYNYELWWVQRTRSALVVQKRKPFTVTAPRCTFDAVNNQYFPYA 453
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Match: A0A7S4A5W8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5W8_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.570e-18 Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 1 DGDETQYGVTFNAGRTAYYFNLEYLTVDVD-----HNYEIWWVQRTMYNYIVRKRKAFTVSSPDCNFDEVNNQYFPYAI 222
D DE VTFN GRT Y F T DV+ HNY+IWWVQRT YN++V+++KAF V+ P C FD VN++YFPY +
Sbjct: 665 DNDEDYILVTFNGGRTHYPFR----TSDVELHQPRHNYQIWWVQRTRYNFVVQQKKAFRVTEPTCTFDSVNDRYFPYTM 739
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Match: A0A7S2FKQ0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKQ0_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.920e-18 Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 16 QYGVTFNAGRTAYYFNLEYLTVDV-DHNYEIWWVQRTMYNYIVRKRKAFTVSSPDCNFDEVNNQYFPYAI 222
QY V+FN GRT Y F L ++ D NYE+WWV+RT YNYIVRK+K F V +P+C FD VN+QY P+A+
Sbjct: 583 QYKVSFNDGRTEYDFAEADLVLEKEDFNYEVWWVERTRYNYIVRKKKPFRVVAPECTFDRVNDQYLPFAL 652
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Match: F0YQ04_AURAN (SRCR domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQ04_AURAN) HSP 1 Score: 84.0 bits (206), Expect = 3.460e-17 Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 1 DGDETQYGVTFNAGRTAYYFNLEYLTVDVD-HNYEIWWVQRTMYNYIVRKRKAFTVSSPDCNFDEVNNQYFPYAI 222
D D Y VTFN RT Y F L + HNY++WWVQRT YN+IV+K+KA V+ P C FD +N++YFPY I
Sbjct: 340 DEDSIYYLVTFNDNRTNYAFRSTDLELHQPRHNYQLWWVQRTRYNFIVQKKKAIRVTEPTCTFDSINDRYFPYTI 414
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Match: F0Y987_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y987_AURAN) HSP 1 Score: 84.0 bits (206), Expect = 3.610e-17 Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 1 DGDETQYGVTFNAGRTAYYFNLEYLTVDVD-HNYEIWWVQRTMYNYIVRKRKAFTVSSPDCNFDEVNNQYFPYAI 222
D D Y VTFN RT Y F L + HNY++WWVQRT YN+IV+K+KA V+ P C FD +N++YFPY I
Sbjct: 243 DEDSIYYLVTFNDNRTNYAFRSTDLELHQPRHNYQLWWVQRTRYNFIVQKKKAIRVTEPTCTFDSINDRYFPYTI 317
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Match: A0A7S2JR29_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JR29_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.890e-13 Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 16 QYGVTFNAGRTAYYFNLEYLT-VDVDHNYEIWWVQRTMYNYIVRKRKAFTVSSPDCNFDEVNNQYFPYAI 222
+YG++FN GRT Y+F+ ++ V +NYE+W+VQRT I+ +K F V+ P C FD ++++YFPYAI
Sbjct: 135 KYGISFNNGRTKYFFDEDHFDLVHPRNNYELWFVQRTRREKIILMKKPFQVTWPPCTFDALSDEYFPYAI 204
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Match: A0A7S2DUE1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUE1_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.370e-12 Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 19 YGVTFNAGRTAY-YFNLEYLTVDVDHNYEIWWVQRTMYNYIVRKRKAFTVSSPDCNFDEVNNQYFPYAI 222
Y V+FN GRT Y +++ E Y++WWVQRT + +IVR++K F V +P C +D N++Y+PYA+
Sbjct: 136 YLVSFNDGRTQYEFYDFEIDLRKPPSYYQVWWVQRTRFEFIVRRKKNFKVVAPMCTYDTTNDRYYPYAV 204
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Match: H3GRN3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRN3_PHYRM) HSP 1 Score: 60.8 bits (146), Expect = 4.260e-9 Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 94 NYEIWWVQRTMYNYIVRKRKAFTVSSPDCNFDEVNNQYFPY 216
+YEIWWVQRT YN+IV+K+K F V+SP C+FD N+Y Y
Sbjct: 296 DYEIWWVQRTRYNFIVQKKKKFRVTSPQCDFDFATNKYKNY 336
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Match: W2PYN6_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2PYN6_PHYPN) HSP 1 Score: 60.8 bits (146), Expect = 4.300e-9 Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 94 NYEIWWVQRTMYNYIVRKRKAFTVSSPDCNFDEVNNQYFPY 216
+YEIWWVQRT YN+IV+K+K F V+SP C+FD N+Y Y
Sbjct: 300 DYEIWWVQRTRYNFIVQKKKKFRVTSPQCDFDFATNKYKNY 340
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Match: A0A6A3U1K2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3U1K2_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 4.750e-9 Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 94 NYEIWWVQRTMYNYIVRKRKAFTVSSPDCNFDEVNNQYFPY 216
+YEIWWVQRT YN+IV+K+K F ++SP C+FD N+Y Y
Sbjct: 237 DYEIWWVQRTRYNFIVQKKKKFRITSPQCDFDFATNKYKNY 277 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6525.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6525.2.1 >prot_P-wetherbeei_contig6525.2.1 ID=prot_P-wetherbeei_contig6525.2.1|Name=mRNA_P-wetherbeei_contig6525.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=76bp DGDETQYGVTFNAGRTAYYFNLEYLTVDVDHNYEIWWVQRTMYNYIVRKRback to top mRNA from alignment at P-wetherbeei_contig6525:2060..2718+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6525.2.1 ID=mRNA_P-wetherbeei_contig6525.2.1|Name=mRNA_P-wetherbeei_contig6525.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=659bp|location=Sequence derived from alignment at P-wetherbeei_contig6525:2060..2718+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6525:2060..2718+ >mRNA_P-wetherbeei_contig6525.2.1 ID=mRNA_P-wetherbeei_contig6525.2.1|Name=mRNA_P-wetherbeei_contig6525.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=228bp|location=Sequence derived from alignment at P-wetherbeei_contig6525:2060..2718+ (Phaeothamnion wetherbeei SAG_119_79)back to top |