mRNA_P-wetherbeei_contig6522.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Match: A0A7S2FVB6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVB6_9STRA) HSP 1 Score: 174 bits (441), Expect = 6.320e-52 Identity = 95/131 (72.52%), Postives = 103/131 (78.63%), Query Frame = 1
Query: 4 MNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKNAKGGAAQNIKRRAMEALXXKKMYENQRDQMAGQQFNVEQTSFAIDSIKDTQTTVAAMKAANKQLKMETKKINISEVRQRQ 396
MNRIFG KK+ PPPSL+DA GRID RV+A+D KIA LD EL KYK LK AKG A NIKRRAME L KKMYE QRDQMAGQ FN+EQTSFAIDSIKDTQTTVAAMK A K LK ETKK+NI ++ Q
Sbjct: 27 MNRIFGKKKDVAPPPSLTDASGRIDSRVQAMDEKIAKLDLELRKYKEQLKKAKGPTAANIKRRAMETLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKDAAKTLKAETKKLNIDQIEDTQ 157
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Match: A0A835ZMU4_9STRA (Snf7 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMU4_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.370e-50 Identity = 90/127 (70.87%), Postives = 104/127 (81.89%), Query Frame = 1
Query: 4 MNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKNAKGGAAQNIKRRAMEALXXKKMYENQRDQMAGQQFNVEQTSFAIDSIKDTQTTVAAMKAANKQLKMETKKINISEV 384
MNRIFG KK+ P PSLSDAG R+DER + +D KI LDQEL+++K+AL AKG AA NIKRRAME L KKMYE QRDQ+AGQQFN+EQT+F IDSIKDTQTTV AMK ANKQ+K E KK+NISE+
Sbjct: 1 MNRIFGKKKDTGPAPSLSDAGARVDERTRNLDEKIKVLDQELLRHKHALAKAKGQAAVNIKRRAMETLKRKKMYEAQRDQLAGQQFNIEQTNFTIDSIKDTQTTVQAMKGANKQIKSEFKKMNISEI 127
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Match: D8LTZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ1_ECTSI) HSP 1 Score: 165 bits (418), Expect = 2.710e-47 Identity = 89/127 (70.08%), Postives = 101/127 (79.53%), Query Frame = 1
Query: 4 MNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKNAKGGAAQNIKRRAMEALXXKKMYENQRDQMAGQQFNVEQTSFAIDSIKDTQTTVAAMKAANKQLKMETKKINISEV 384
M R+FG KKEK P PSLS+AGGR+DERV I LDQEL+KY+NALK AKG A NIK+RAME L KKMYE QRDQMAGQQFN+EQT FAIDSIKDT TTVAAMK A+K LK + KKI+I++V
Sbjct: 75 MKRVFGKKKEKGPAPSLSEAGGRVDERVAKIXXXXXGLDQELVKYRNALKKAKGPTATNIKKRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKV 201
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Match: A0A7S4EE62_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EE62_9STRA) HSP 1 Score: 147 bits (372), Expect = 5.830e-42 Identity = 79/131 (60.31%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 4 MNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKNAKGGAAQNIKRRAMEALXXKKMYENQRDQMAGQQFNVEQTSFAIDSIKDTQTTVAAMKAANKQLKMETKKINISEVRQRQ 396
M RIFG +K K P PSL DA R+DER A+D KI LD EL YK LK A+G A Q +KRRAM L K+MYE QRDQ+AGQ FNVEQT+FAIDS+KDT TTV AMK A+K LK E KK+++S++ Q
Sbjct: 1 MRRIFGARKAKAPAPSLGDASQRLDERTTALDEKIRKLDIELAGYKEKLKKARGAAQQTLKRRAMGVLRRKRMYEQQRDQLAGQAFNVEQTNFAIDSVKDTLTTVQAMKTASKTLKKEVKKVDLSQIEDLQ 131
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Match: A0A7S2ALR0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALR0_9STRA) HSP 1 Score: 143 bits (360), Expect = 4.590e-41 Identity = 81/131 (61.83%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 4 MNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKNAKGGAAQNIKRRAMEALXXKKMYENQRDQMAGQQFNVEQTSFAIDSIKDTQTTVAAMKAANKQLKMETKKINISEVRQRQ 396
MNRIFG KK P PSLSDA GRID+RV A+D AKG A NIKRRAM+ L KKMYE QRDQMAGQ FN+EQTSFAIDSIKDTQTTVAAMK A LK ETKK+NI + Q
Sbjct: 1 MNRIFGKKKPTAPAPSLSDASGRIDQRVSAVDXXXXXXXXXXXXXXXXXXXAKGPTAANIKRRAMDTLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKVAASTLKAETKKLNIDSIEDTQ 131
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Match: A0A7S3K2P3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2P3_9STRA) HSP 1 Score: 145 bits (366), Expect = 6.730e-41 Identity = 77/132 (58.33%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 1 RMNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKNAKGGAAQNIKRRAMEALXXKKMYENQRDQMAGQQFNVEQTSFAIDSIKDTQTTVAAMKAANKQLKMETKKINISEVRQRQ 396
+M RIFG KK+ PPP+L DAG ++D RV A+D KI L+ EL YK LK A+G A + +K+RAM L KKMYE QRDQ+AGQ FN+EQT+F IDS+KDT TTV AMKAA+K LK E KK+NI ++ Q
Sbjct: 9 KMKRIFGQKKDVAPPPTLGDAGAKVDSRVAALDEKIKKLEVELSGYKEKLKRARGPAQKTLKQRAMGVLKRKKMYEQQRDQLAGQAFNIEQTNFTIDSVKDTITTVDAMKAASKTLKTEFKKVNIDKIDDLQ 140
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Match: A0A7S2AMY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMY1_9STRA) HSP 1 Score: 140 bits (353), Expect = 5.650e-39 Identity = 80/131 (61.07%), Postives = 86/131 (65.65%), Query Frame = 1
Query: 4 MNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKNAKGGAAQNIKRRAMEALXXKKMYENQRDQMAGQQFNVEQTSFAIDSIKDTQTTVAAMKAANKQLKMETKKINISEVRQRQ 396
MNRIFG KK P PSLSDA GRID+RV A+ AKG A NIKRRAM+ L KKMYE QRDQMAGQ FN+EQTSFAIDSIKDTQTTVAAMK A LK ETKK+NI + Q
Sbjct: 1 MNRIFGKKKPTAPAPSLSDASGRIDQRVSAVXXXXXXXXXXXXXXXXXXXXAKGPTAANIKRRAMDTLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKVAASTLKAETKKLNIDSIEDTQ 131
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Match: A0A485L0R2_9STRA (Aste57867_14479 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0R2_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.120e-37 Identity = 71/131 (54.20%), Postives = 93/131 (70.99%), Query Frame = 1
Query: 4 MNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKNAKGGAAQNIKRRAMEALXXKKMYENQRDQMAGQQFNVEQTSFAIDSIKDTQTTVAAMKAANKQLKMETKKINISEVRQRQ 396
MNRIFG KK + PP + D GR+D RV+ +D KIA L++EL+KY+ + AKG A +IK+RA++ L KKMYE QRD MA Q FN+EQ SFAI++ KD+ TV+AMK+A QLK ETKK N +E+ Q
Sbjct: 1 MNRIFGKKKPEAPPVDIGDVRGRVDGRVETLDMKIAKLEEELLKYRQQMAKAKGAALTSIKQRALQTLKRKKMYEQQRDAMASQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQ 131
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Match: A0A0N5AP19_9BILA (Uncharacterized protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AP19_9BILA) HSP 1 Score: 131 bits (329), Expect = 2.630e-35 Identity = 72/132 (54.55%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 4 MNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKNAKGGAAQN-IKRRAMEALXXKKMYENQRDQMAGQQFNVEQTSFAIDSIKDTQTTVAAMKAANKQLKMETKKINISEVRQRQ 396
M RIFGT +K PPPSLSDA ID R ++I+ KIA LD EL+KYK+ +K + G +N +K++A+ L K+MYENQRDQ+A Q FN+EQ++FAI +KDTQTTV AMK+ K +K E KKI+I E+ Q
Sbjct: 1 MRRIFGTSGKKEPPPSLSDAIANIDSRGESIEKKIAKLDAELVKYKDEMKKMREGPGKNQVKQKALRILKQKRMYENQRDQLAQQSFNMEQSNFAIQGMKDTQTTVNAMKSGLKAMKKEYKKIDIDEIENLQ 132
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Match: E4WZN8_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4WZN8_OIKDI) HSP 1 Score: 128 bits (322), Expect = 1.850e-34 Identity = 68/132 (51.52%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 4 MNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKNAKGGAAQN-IKRRAMEALXXKKMYENQRDQMAGQQFNVEQTSFAIDSIKDTQTTVAAMKAANKQLKMETKKINISEVRQRQ 396
MNRIFG+ K K PPP+L+D +D R +ID KIA LD EL+KYKN +K + G +N +K++AM L +KMYE QR+Q++ Q FN++Q +F I S+KDTQ TV AMKA K +K E KKINI ++ Q
Sbjct: 1 MNRIFGSGKPKAPPPNLNDCVQNLDSRGDSIDKKIAKLDAELVKYKNQMKTMRNGPGKNAVKQKAMRVLKQRKMYEGQREQISNQSFNMDQANFTIQSLKDTQDTVTAMKAGAKAMKKEYKKINIDKIEDLQ 132 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6522.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6522.1.1 >prot_P-wetherbeei_contig6522.1.1 ID=prot_P-wetherbeei_contig6522.1.1|Name=mRNA_P-wetherbeei_contig6522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp MNRIFGTKKEKVPPPSLSDAGGRIDERVKAIDAKIAALDQELIKYKNALKback to top mRNA from alignment at P-wetherbeei_contig6522:2879..3316+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6522.1.1 ID=mRNA_P-wetherbeei_contig6522.1.1|Name=mRNA_P-wetherbeei_contig6522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig6522:2879..3316+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6522:2879..3316+ >mRNA_P-wetherbeei_contig6522.1.1 ID=mRNA_P-wetherbeei_contig6522.1.1|Name=mRNA_P-wetherbeei_contig6522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig6522:2879..3316+ (Phaeothamnion wetherbeei SAG_119_79)back to top |