mRNA_P-wetherbeei_contig6502.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 163 bits (413), Expect = 4.720e-43 Identity = 105/274 (38.32%), Postives = 146/274 (53.28%), Query Frame = 1
Query: 13 AAAAVDGPVPQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSHVPHGRNVIGCRLVFAKKRAADGAILLYKARIVAQGFSQRPGVHYGAMFAPVMSADAMRFIFALAAEFDFEVHQMDVATAYLSAPRTDLLWMRVPPG-PFGFVDCAALQLLKAIYGLKQAANLWHFCLRSRLLSDGFRAVDADCCVSVHGDVSPVVAAGGKGTYLVVGIHVDDLLAAGAPTSAITGFKASISQRFAMKDFGRVHTMFGILVQQNKAG-TIRLPQPHYL 828
AA DG P++V EA E +W AA+++EL + TW + P G NV+G VF KR A GAI YKAR+VAQGFSQ PGV Y FAPV ++R + ALAA FD+E+HQMDV AYL+ + ++M+ PPG P + L K IYGLKQA W+ L + L GF D V G G +V + VDDL A ++ K+++ +F M D G +H + G+ +++++ G TI + Q Y+
Sbjct: 21 AAGGGDGVEPRTVDEAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPP-GANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFR--------HGPNGEIAIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYI 285
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Match: A0A075B3L7_ROZAC (Integrase, catalytic core domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B3L7_ROZAC) HSP 1 Score: 164 bits (416), Expect = 2.340e-42 Identity = 92/268 (34.33%), Postives = 143/268 (53.36%), Query Frame = 1
Query: 37 VPQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSHVPHGRNVIGCRLVFAKKRAADGAILLYKARIVAQGFSQRPGVHYGAMFAPVMSADAMRFIFALAAEFDFEVHQMDVATAYLSAPRTDLLWMRVPPGPFGFV----DCAALQLLKAIYGLKQAANLWHFCLRSRLLSDGFRAVDADCCVSVHGDVSPVVAAGGKGTYLVVGIHVDDLLAAGAPTSAITGFKASISQRFAMKDFGRVHTMFGILVQQNKAGTIRLPQPHYL 828
+P++V EAL G+E EW AM+ E + + NKTW+ +P R +GCR VFAKK ++G + YKAR+VAQGFSQRPG+ +APV ++R + AL + D+ +HQMD+ TAYL+ +++M+ P G F+ + L K++YGLKQ+ LW+ + L +GF+ AD C+ V + G +V+ I+VDD++ I K + + +KD G + GI + + L Q Y+
Sbjct: 372 IPRNVKEALSGAEANEWKQAMETEYKSLEENKTWK-LCELPASRTAVGCRWVFAKKFDSEGKLQRYKARLVAQGFSQRPGIDVEQTYAPVTRIQSVRILIALGVQLDWHMHQMDMVTAYLNGTLDTMIYMKQPEG---FIKEGSENLVCDLQKSLYGLKQSGRLWNIKIDCDLRKNGFKRCRADWCIYVKQE---------NGVIIVIAIYVDDIIIMSKEIELINKTKDLLKTLYKVKDMGNIGWCLGIKINRIGENVTELSQKQYI 626
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 160 bits (406), Expect = 1.610e-41 Identity = 97/263 (36.88%), Postives = 146/263 (55.51%), Query Frame = 1
Query: 40 PQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSHVPHGRNVIGCRLVFAKKRAADGAILLYKARIVAQGFSQRPGVHYGAMFAPVMSADAMRFIFALAAEFDFEVHQMDVATAYLSAPRTDLLWMRVPPG-PFGFVDCAALQLLKAIYGLKQAANLWHFCLRSRLLSDGFRAVDADCCVSVHGDVSPVVAAGGKGTYLVVGIHVDDLLAAGAPTSAITGFKASISQRFAMKDFGRVHTMFGILVQQNKAGTIRLPQPHY 825
P +V+EAL G W AMQ+E+ + + W + +P R +GC+ VF K ADG+I +KAR+VAQGFSQR GV Y F+PV+ +++R + AL+ + ++HQMDV A+L+ D ++M+ P G + A +L K++YGLKQ++ W+ L L S GF ++D C+ V + G VV IHVDD++ AG I K SI++RF +KD G + + G+ V Q A + + QP Y
Sbjct: 146 PTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWE-LTELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEE---------DGNIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDA-KVWIGQPTY 397
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Match: A0A1M2VVQ8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VVQ8_TRAPU) HSP 1 Score: 160 bits (405), Expect = 1.940e-41 Identity = 105/265 (39.62%), Postives = 146/265 (55.09%), Query Frame = 1
Query: 4 LTAAAAAVDGPVPQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSHVPHGRNVIGCRLVFAKKRAADGAILLYKARIVAQGFSQRPGVHYGAMFAPVMSADAMRFIFALAAEFDFEVHQMDVATAYLSAP--RTDLLWMRVPPGPFGFVDCA-ALQLLKAIYGLKQAANLWHFCLRSRLLSD--GFRAVDADCCVSVHGDVSPVVAAGGKGTYLVVGIHVDDLLAAGAPTSAITGFKASISQRFAMKDFGRVHTMFGILVQ 783
+ A A V+G P S+AEA E W AM+EEL A + +KTWR P G N++ CR VF K+ A G + Y+AR+VA+GFSQ PGV + +APV ++R A AA DFEVHQ+DV +AYL+ +++WM VPPG D + AL+LL+ +YGLKQ+A WH L R+L D G D D V D + ++ V+ +HVDDL A + I KA + + F + D G +H + G V+
Sbjct: 391 MAAQMAEVEGLDPCSLAEAKRRPEWPHWEEAMEEELHALEAHKTWRLEKPPP-GANIVSCRWVFHAKKDASGNVYRYRARLVARGFSQIPGVDFFDTYAPVAKTASIRIALAFAARHDFEVHQVDVKSAYLNGEFEENEVIWMAVPPGSNITNDKSLALRLLRPLYGLKQSARHWHKKLL-RVLRDKLGMSQSDVDQAVFYRVDGTDLI---------VIVVHVDDLTVVAATDALIREVKAKLREAFEISDEGEIHWILGFAVE 644
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Match: A0A060SJQ5_PYCCI (Uncharacterized protein (Fragment) n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SJQ5_PYCCI) HSP 1 Score: 161 bits (408), Expect = 3.160e-41 Identity = 102/262 (38.93%), Postives = 150/262 (57.25%), Query Frame = 1
Query: 19 AAVDGPVPQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSHVPHGRNVIGCRLVFAKKRAADGAILLYKARIVAQGFSQRPGVHYGAMFAPVMSADAMRFIFALAAEFDFEVHQMDVATAYLSAPRTD--LLWMRVPPGPFGFVD-CAALQLLKAIYGLKQAANLWHFCLRSRLLSDGFRAVDADCCVSVHGDVSPVVAAGGKGTYLVV-GIHVDDLLAAGAPTSAITGFKASISQRFAMKDFGRVHTMFGILVQQNK 792
A V+G P+S+AEA++ E W AM+EEL A + +KTWR P N++ CR VF K+ A G + Y+AR+VA+GFSQ PGV + +APV ++R A AA +FEVHQ+DV +AYL+ D ++WM VPPG D AL+LL+ +YGLKQ+A WH L R+L + R +D +V V +GT L+V +HVDDL + + + KA + + F + D G +H + G V++++
Sbjct: 1009 AEVEGLDPRSLAEAMQRPEWPRWEEAMEEELRALEAHKTWRLERPPPDA-NIVSCRWVFHAKKDASGNVYRYRARLVARGFSQVPGVDFFDTYAPVAKTASIRVSLAFAARHNFEVHQLDVKSAYLNGEFEDNEVIWMAVPPGSNLTTDKTLALRLLRPLYGLKQSARHWHKKLL-RVLQEKLRMAQSDVDQAVFFRV--------EGTELIVIVVHVDDLTVVTSSDALVAEVKAKLREAFEISDEGEIHWILGFAVERDR 1260
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Match: A0A7D9ESN8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ESN8_PARCT) HSP 1 Score: 159 bits (403), Expect = 1.470e-40 Identity = 103/270 (38.15%), Postives = 152/270 (56.30%), Query Frame = 1
Query: 40 PQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSHVPHG--RNVIGCRLVFAKKRAADGAILLYKARIVAQGFSQRPGVHYGAMFAPVMSADAMRFIFALAAEFDFEVHQMDVATAYLSAPRTDLLWMRVPPGPFGFVDCAA----LQLLKAIYGLKQAANLWHFCLRSRLLSDGFRAVDADCCVSVHGDVSPVVAAGGKGTYLVVGIHVDDLLAAGAPTSAITGFKASISQRFAMKDFGRVHTMFGILVQQN-KAGTIRLPQPHYL 828
P+SV AL G EW AM E S+ N TW VP +NV+G R V KR DG+I +KAR+VAQG+SQ G Y +F+PV ++R + ALA E+D EVHQMDV TA+L+ ++M+ P G FV+ +L K+IYGLKQ+A W+ L L S G+R AD C+ V V GG+ +++++G++VDD++ + K ++S+RF M D G VH + G+L++++ KA + Q +Y+
Sbjct: 864 PESVQRALNGKYAKEWKDAMISEYSSLLENDTW---ELVPPSDDQNVVGSRWVLKVKRKEDGSIDRFKARVVAQGYSQTKGADYDEVFSPVARHTSLRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQPEG---FVNPDKPDYLCKLQKSIYGLKQSARCWNDTLNGYLKSRGYRKSGADGCIYVKS----VKKDGGRISFVILGVYVDDIIPVSNDIQMLNSEKKALSERFKMDDRGEVHYLLGMLIKRDRKARVTTISQRNYV 1123
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Match: A0A177VM49_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VM49_9BASI) HSP 1 Score: 159 bits (401), Expect = 2.620e-40 Identity = 94/254 (37.01%), Postives = 145/254 (57.09%), Query Frame = 1
Query: 40 PQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSHVPHGRNVIGCRLVFAKKRAADGAILLYKARIVAQGFSQRPGVHYGAMFAPVMSADAMRFIFALAAEFDFEVHQMDVATAYLSAPRTDLLWMRVPPG-PFGFVDCAALQLLKAIYGLKQAANLWHFCLRSRLLSDGFRAVDADCCVSVHGDVSPVVAAGGKGTYLVVGIHVDDLLAAGAPTSAITGFKASISQRFAMKDFGRVHTMFGILVQQNKAG 798
P ++ +A+ ++ W+ AM+EE++++ TW +P R+++G R VF K DG + YKAR+VAQGFSQ PGV + ++PV +R + ALAA + VHQ+DV TAYL D ++MR PP + A +L++AIYGLKQ+ W F LRS LL+ GF+ AD + ++G + + VV ++VDD+L G I GFKA +++RF MKD G + G+ ++++ G
Sbjct: 635 PNTLKDAMRRTDWGLWLEAMKEEIASHTEMGTWV-LEELPADRDLVGSRWVFKLKLDTDGCVARYKARLVAQGFSQVPGVDFHETYSPVTRFVTIRTLLALAAYLGWHVHQLDVVTAYLYGFLKDTVYMRQPPAFEVPGQEHLACRLIRAIYGLKQSGREWFFTLRSALLALGFQQSIADQAIFIYGSGTEAI---------VVAVYVDDVLVFGKDEKEIVGFKAELAKRFRMKDQGTIGQFLGMKIERSVDG 878
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Match: A0A1M2V5M2_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V5M2_TRAPU) HSP 1 Score: 157 bits (397), Expect = 3.410e-40 Identity = 106/275 (38.55%), Postives = 150/275 (54.55%), Query Frame = 1
Query: 19 AAVDGPVPQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSHVPHGRNVIGCRLVFAKKRAADGAILLYKARIVAQGFSQRPGVHYGAMFAPVMSADAMRFIFALAAEFDFEVHQMDVATAYLSAPRTD--LLWMRVPPGPFGFVD-CAALQLLKAIYGLKQAANLWHFCLRSRLLSDGFRAVDADCCVSVHGDVSPVVAAGGKGTYLVV-GIHVDDLLAAGAPTSAITGFKASISQRFAMKDFGRVHTMFGILVQQNKAGT-IRLPQPHYL 828
A V+G P+S+AEA E W AM EEL A + ++TWR P G N+I CR VF K+ A G + Y+AR+VA+GFSQ PGV + +APV ++R A AA DFEVHQ+DV +AYL+ D ++WM VPPG D L+LL+ +YGLKQ+A WH L +L + R +D V V +GT L+V +HVDDL A + + KA + + F + D G +H + G V ++++ + L Q Y+
Sbjct: 373 AEVEGLDPRSLAEAKRRPEWPRWEEAMAEELCALEAHETWRLEKPPP-GANIISCRWVFHAKKDASGNVYRYRARLVARGFSQVPGVDFFDTYAPVAKTASIRVALAFAARHDFEVHQVDVKSAYLNGEFEDNEVIWMAVPPGSNLTNDKTLVLRLLRPLYGLKQSARHWHKKLL-HVLCEKLRMAQSD--------VDQAVFYRAEGTDLIVIVVHVDDLTVVTATVALVVEVKAKLREAFDISDKGEIHFILGFAVLRDRSNRRLSLSQTAYI 637
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Match: A0A2N9EBY4_FAGSY (Integrase catalytic domain-containing protein n=4 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EBY4_FAGSY) HSP 1 Score: 158 bits (399), Expect = 4.850e-40 Identity = 97/265 (36.60%), Postives = 148/265 (55.85%), Query Frame = 1
Query: 40 PQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSHVPHGRNVIGCRLVFAKKRAADGAILLYKARIVAQGFSQRPGVHYGAMFAPVMSADAMRFIFALAAEFDFEVHQMDVATAYLSAPRTDLLWMRVPPG-PFGFVDCAALQLLKAIYGLKQAANLWHFCLRSRLLSDGFRAVDADCCVSVHGDVSPVVAAGGKGTYLVVGIHVDDLLAAGAPTSAITGFKASISQRFAMKDFGRVHTMFGILVQQNKA-GTIRLPQPHYL 828
P S ++A++ S+ T+W+ AM +EL + D N W +P+G IGC+ VF K+ + G I YKAR+VA+GFSQ+ GV Y F+PV S D+ R + AL A FDFE+HQMDV TA+L+ T+ ++M P G + +L K+IYGLKQA+ W+ + + S GF+ D C+ + +G K +LV ++VDD+L A + K + F MKD G + GI + ++++ G + L Q Y+
Sbjct: 636 PSSYSQAIQSSQSTKWIDAMVDELKSMDNNNVWDLVD-LPNGCRPIGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDFELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYLK-------ISGSKIIFLV--LYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYI 890
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 158 bits (399), Expect = 4.930e-40 Identity = 96/263 (36.50%), Postives = 144/263 (54.75%), Query Frame = 1
Query: 40 PQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSHVPHGRNVIGCRLVFAKKRAADGAILLYKARIVAQGFSQRPGVHYGAMFAPVMSADAMRFIFALAAEFDFEVHQMDVATAYLSAPRTDLLWMRVPPG-PFGFVDCAALQLLKAIYGLKQAANLWHFCLRSRLLSDGFRAVDADCCVSVHGDVSPVVAAGGKGTYLVVGIHVDDLLAAGAPTSAITGFKASISQRFAMKDFGRVHTMFGILVQQNKAGTIRLPQPHY 825
P +V+EAL G W AMQ+E+ + + W + +P R +GC+ VF K ADG+I +KAR+VAQGFSQR GV Y F+PV+ + +R + AL+ + ++HQMDV A+L+ D ++M+ P G + +L K++YGLKQ++ W+ L L S GF ++D C+ V + G VV IHVDD++ AG I K SI++RF +KD G + + G+ V Q A + + QP Y
Sbjct: 760 PTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWE-LTELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEE---------DGDIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDA-KVWIGQPTY 1011 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6502.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6502.1.1 >prot_P-wetherbeei_contig6502.1.1 ID=prot_P-wetherbeei_contig6502.1.1|Name=mRNA_P-wetherbeei_contig6502.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp ILTAAAAAVDGPVPQSVAEALEGSEVTEWMAAMQEELSANDRNKTWRRSSback to top mRNA from alignment at P-wetherbeei_contig6502:2587..3414+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6502.1.1 ID=mRNA_P-wetherbeei_contig6502.1.1|Name=mRNA_P-wetherbeei_contig6502.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig6502:2587..3414+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6502:2587..3414+ >mRNA_P-wetherbeei_contig6502.1.1 ID=mRNA_P-wetherbeei_contig6502.1.1|Name=mRNA_P-wetherbeei_contig6502.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig6502:2587..3414+ (Phaeothamnion wetherbeei SAG_119_79)back to top |