mRNA_P-wetherbeei_contig6473.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Match: A0A835Z5E2_9STRA (Peroxisomal membrane protein-related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E2_9STRA) HSP 1 Score: 158 bits (399), Expect = 2.880e-47 Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1
Query: 1 QVIWNPIFGVMFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSQRLLYINSIQIGYNVFLSFIGNKDASAEAKEGEVVTKLE 297
Q IWNPIFG+MFFSYLGLTEGKS +QI KIKADL TAV+GSWTVWIPAHTINF+FVP SQRLLYINSIQIGYNVFLSF+GNK A +A V+ K+E
Sbjct: 92 QTIWNPIFGIMFFSYLGLTEGKSVDQIYQKIKADLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINSIQIGYNVFLSFLGNKKAPEDA----VIEKVE 186
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Match: D8LGB2_ECTSI (Peroxisomal membrane protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB2_ECTSI) HSP 1 Score: 149 bits (375), Expect = 2.090e-43 Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = 1
Query: 1 QVIWNPIFGVMFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSQRLLYINSIQIGYNVFLSFIGNKDASAEAKEGEVV 285
Q IWNPIFGVMFF+YLGL EGKS + I KIK DL TAV+GSWTVWIPAHTINF+FVP SQRLLYIN+IQIGYN+FLSF+GNK A ++ + +V
Sbjct: 92 QTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKADDDSVKSALV 186
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Match: A0A7S2LHQ9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHQ9_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.710e-43 Identity = 67/93 (72.04%), Postives = 76/93 (81.72%), Query Frame = 1
Query: 1 QVIWNPIFGVMFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSQRLLYINSIQIGYNVFLSFIGNKDASAEAKEGE 279
Q IWNPIFG+MFF YL L EGKS + KI++DLKTAV+GSW VW+PAHTINF F+PPSQRLLYINSIQIGYNVFLSF+GNK E EG+
Sbjct: 92 QTIWNPIFGLMFFGYLNLVEGKSFDDYKKKIQSDLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYNVFLSFLGNKKVDGEEAEGD 184
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Match: A0A6U6CAW4_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6CAW4_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.960e-43 Identity = 67/94 (71.28%), Postives = 78/94 (82.98%), Query Frame = 1
Query: 1 QVIWNPIFGVMFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSQRLLYINSIQIGYNVFLSFIGNKDASAEAKEGEV 282
Q IWNPIFG+MFF YL + EGKS +KIKADLKTAV+GSW VW+PAHTINF FVPPSQRLLYIN+IQIGYNVFLSF+GNKD + ++ E+
Sbjct: 98 QTIWNPIFGLMFFGYLNIMEGKSFETYTNKIKADLKTAVMGSWAVWVPAHTINFAFVPPSQRLLYINTIQIGYNVFLSFLGNKDVEEDEEKKEL 191
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Match: K0SKR3_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKR3_THAOC) HSP 1 Score: 147 bits (371), Expect = 3.490e-43 Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 1
Query: 1 QVIWNPIFGVMFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSQRLLYINSIQIGYNVFLSFIGNKDASAEAKE 273
Q +WNPIFG+MFF YL + EGKS + K+KADLKTAV+GSW VW+PAHTINF FVPPSQRLLYINSIQIGYN+FLSF+GNK E KE
Sbjct: 82 QTMWNPIFGLMFFGYLNVCEGKSFEEYTKKVKADLKTAVMGSWAVWVPAHTINFAFVPPSQRLLYINSIQIGYNIFLSFLGNKKVDGEDKE 172
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Match: A0A7R9Z9F5_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9Z9F5_9STRA) HSP 1 Score: 148 bits (373), Expect = 5.290e-43 Identity = 68/91 (74.73%), Postives = 75/91 (82.42%), Query Frame = 1
Query: 1 QVIWNPIFGVMFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSQRLLYINSIQIGYNVFLSFIGNKDASAEAKE 273
Q IWNPIFG MFF YL L EGKS +KIKADLKTAV+GSW VW+PAHTINF FVPPSQRLLYIN+IQIGYNVFLSF+GNK+ E K+
Sbjct: 119 QTIWNPIFGCMFFGYLNLMEGKSFEDYKNKIKADLKTAVMGSWAVWVPAHTINFAFVPPSQRLLYINTIQIGYNVFLSFLGNKEVDGEEKK 209
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Match: A0A7S2V4A9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4A9_9STRA) HSP 1 Score: 147 bits (370), Expect = 6.860e-43 Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 1
Query: 1 QVIWNPIFGVMFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSQRLLYINSIQIGYNVFLSFIGNKDASAEAKE 273
Q+ WNPIFG +FF+YLGL EGKS +I +KIK+DLKTAV+GSWTVW+PAH INF+FVP SQRLLYIN+IQIGYN+FLSF+GNK A K+
Sbjct: 92 QLFWNPIFGTVFFTYLGLAEGKSGGEIVNKIKSDLKTAVMGSWTVWVPAHIINFKFVPSSQRLLYINTIQIGYNIFLSFLGNKSADEPEKK 182
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Match: A0A7S2RA66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA66_9STRA) HSP 1 Score: 147 bits (370), Expect = 8.190e-43 Identity = 66/83 (79.52%), Postives = 73/83 (87.95%), Query Frame = 1
Query: 1 QVIWNPIFGVMFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSQRLLYINSIQIGYNVFLSFIGNK 249
QV WNP FG+MFF+YLGL EGKS I KIKADLKTAV+GSW VW+PAHTINF F+PPSQRLLYINSIQIGYN+FLSF+GNK
Sbjct: 101 QVFWNPCFGIMFFTYLGLAEGKSFADIMKKIKADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYNIFLSFLGNK 183
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Match: B8BUR3_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUR3_THAPS) HSP 1 Score: 146 bits (368), Expect = 9.950e-43 Identity = 66/93 (70.97%), Postives = 76/93 (81.72%), Query Frame = 1
Query: 1 QVIWNPIFGVMFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSQRLLYINSIQIGYNVFLSFIGNKDASAEAKEGE 279
Q IWNPIFG+MFF YL + EGKS +KIKADLKTAV+GSW VW+PAHTINF F+PP QRLLYINSIQIGYNVFLSF+GNK +A++ E
Sbjct: 77 QTIWNPIFGLMFFGYLNVMEGKSFEDYKNKIKADLKTAVMGSWAVWVPAHTINFAFIPPQQRLLYINSIQIGYNVFLSFLGNKKVEGDAEKKE 169
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Match: A0A6S9LPN5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LPN5_HETAK) HSP 1 Score: 145 bits (366), Expect = 2.620e-42 Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 1
Query: 1 QVIWNPIFGVMFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSQRLLYINSIQIGYNVFLSFIGNKDASAEAKE 273
Q+IWNPIFGV FFS+LG EGKS +I DKIK DL TAV GSWTVW+PAH INFRF+P SQRLLYINSIQIGYN+FLSF+GNK E ++
Sbjct: 92 QLIWNPIFGVCFFSFLGAAEGKSGGEIVDKIKNDLMTAVTGSWTVWVPAHIINFRFIPSSQRLLYINSIQIGYNMFLSFLGNKKVDGEEEK 182 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6473.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6473.1.1 >prot_P-wetherbeei_contig6473.1.1 ID=prot_P-wetherbeei_contig6473.1.1|Name=mRNA_P-wetherbeei_contig6473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=90bp MFFSYLGLTEGKSPNQIADKIKADLKTAVVGSWTVWIPAHTINFRFVPPSback to top mRNA from alignment at P-wetherbeei_contig6473:67..366+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6473.1.1 ID=mRNA_P-wetherbeei_contig6473.1.1|Name=mRNA_P-wetherbeei_contig6473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig6473:67..366+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6473:67..366+ >mRNA_P-wetherbeei_contig6473.1.1 ID=mRNA_P-wetherbeei_contig6473.1.1|Name=mRNA_P-wetherbeei_contig6473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig6473:67..366+ (Phaeothamnion wetherbeei SAG_119_79)back to top |