mRNA_P-wetherbeei_contig6419.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Match: A0A7S0TPG2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TPG2_HEMAN) HSP 1 Score: 154 bits (389), Expect = 7.950e-45 Identity = 77/125 (61.60%), Postives = 95/125 (76.00%), Query Frame = 2
Query: 179 LPMVFVSAAEARWTFDGAFVGTPVEWLHAYLVAKRAVEDKLLNDLGGGDQPSLRPIVLRPSLVWTPSRPFALPPVAAFTIGNFLGLPFVDRPVRVDTLAAAAMAAVGDQAARGVFDYSRMEALAR 553
LP FVSAAEARWTFDGAF GTPVEWLH YL+AKRAVE L+++ G +LRPI++RPSLVWT S+P + PV AFT+GN LGLPFVDRPV+V TLA + + A+ D G+FD+ ME +A+
Sbjct: 19 LPFAFVSAAEARWTFDGAFKGTPVEWLHRYLIAKRAVESDLVDNHGKAG--ALRPIIVRPSLVWTWSKPASFLPVGAFTVGNALGLPFVDRPVQVSTLAKSIVGAILDPKESGIFDFRGMERVAK 141
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Match: A0A6H5KTE1_9PHAE (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTE1_9PHAE) HSP 1 Score: 150 bits (379), Expect = 1.560e-41 Identity = 80/123 (65.04%), Postives = 96/123 (78.05%), Query Frame = 2
Query: 182 PMVFVSAAEARWTFDGAFVGTPVEWLHAYLVAKRAVEDKLLNDLGGGDQPSLRPIVLRPSLVWTPSRPFALPPVAAFTIGNFLGLPFVDRPVRVDTLAAAAMAAVGDQAARGVFDYSRMEALA 550
P VF+SAAEA+W FDG F G+PV +LH YLVAKRAVED+LLN+ +PSLR +VLRPSLVWT RP AL PVAAF IG+ LGLPF+DRPV V+TLA+AA+ A+ D + RGV D+ ME LA
Sbjct: 150 PFVFISAAEAKWGFDGIFEGSPVGFLHDYLVAKRAVEDELLNN-----KPSLRGVVLRPSLVWTKRRPGALLPVAAFQIGSRLGLPFIDRPVHVETLASAAVEALFDSSVRGVQDWRGMEKLA 267
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Match: L1I751_GUITC (Epimerase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I751_GUITC) HSP 1 Score: 142 bits (358), Expect = 1.240e-38 Identity = 69/126 (54.76%), Postives = 94/126 (74.60%), Query Frame = 2
Query: 179 LPMVFVSAAEARWTFDGAFVGTPVEWLHAYLVAKRAVEDKLLNDLGGGDQPSLRPIVLRPSLVWTPSRPFALPPVAAFTIGNFLGLPFVDRPVRVDTLAAAAMAAVGDQAARGVFDYSRMEALARQ 556
+P FVSAAE RWTFD +F GTP++WL YL+AKRAVE +L++ G G L+PI++RPSL+WT RP AL PVAAFT GN LGLPFVD+PV+V TL+ A + + ++ +GV+++ ME LA++
Sbjct: 143 IPFAFVSAAEVRWTFDKSFEGTPLDWLRRYLIAKRAVESELIDVYGAGGL--LKPIIVRPSLIWTWDRPGALLPVAAFTFGNRLGLPFVDKPVQVSTLSKAILKGLESKSEKGVYNFEGMERLAKE 266
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Match: A0A7S0SD09_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SD09_9CHLO) HSP 1 Score: 130 bits (326), Expect = 2.700e-35 Identity = 73/123 (59.35%), Postives = 85/123 (69.11%), Query Frame = 2
Query: 182 PMVFVSAAEARWTFDGAFVGTPVEWLHAYLVAKRAVEDKLLNDLGGGDQPSLRPIVLRPSLVWTPSRPFALPPVAAFTIGNFLGLPFVDRPVRVDTLAAAAMAAVGDQAARGVFDYSRMEALA 550
P VF+SAAEA+WTF PV+WL YLVAKRAVE K+ + G +R LRPSLV+T RP ALP VAAF +GN LGLPFVDRPV VDTLAAAA+AAV D+ G+ D+ ME LA
Sbjct: 23 PFVFISAAEAKWTFKA-----PVQWLEEYLVAKRAVETKVSDMTASG---KIRGSCLRPSLVYTFDRPQALPAVAAFMVGNALGLPFVDRPVTVDTLAAAAVAAVEDRNVSGILDFREMERLA 137
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Match: A0A835YPV7_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV7_9STRA) HSP 1 Score: 132 bits (333), Expect = 9.410e-35 Identity = 73/128 (57.03%), Postives = 87/128 (67.97%), Query Frame = 2
Query: 182 PMVFVSAAEARWTFDGAFVGTPVEWLHAYLVAKRAVEDKLLNDLGGGDQPSLRPIVLRPSLVWTPSRPFALPPVAAFTIGNFLGLPFVDRPVRVDTLAAAAMAAVGDQAARGVFDYSRMEALARQRKR 565
P VFVSAAEA WT D F GTP+ +L YLVAKRA E++LL+D +LR VLRPSLVWT RP ALP V+AFT N +G+PF+DRPV V TLAAAA+ A+ D + G +Y ME LA Q R
Sbjct: 158 PFVFVSAAEAAWTKDALFEGTPLAFLRRYLVAKRAAEERLLSDAR-----NLRATVLRPSLVWTKERPAALPAVSAFTAANAIGIPFIDRPVSVTTLAAAAVEALEDASCSGTQNYKGMERLAAQAMR 280
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Match: C1E365_MICCC (Epimerase domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E365_MICCC) HSP 1 Score: 123 bits (308), Expect = 9.800e-31 Identity = 69/126 (54.76%), Postives = 82/126 (65.08%), Query Frame = 2
Query: 179 LPMVFVSAAEARWTFDGAFVGTPVEWLHAYLVAKRAVEDKLLNDLGGGDQPSLRPIVLRPSLVWTPSRPFALPPVAAFTIGNFLGLPFVDRPVRVDTLAAAAMAAVGDQAARGVFDYSRMEALARQ 556
+P VFVSAAEARWTF PV WL YL+AKRAVE +L G+ +R LRPSLV+ +P A+P V AF +GN LGLPFVDRPV VDTLA+AA+ V D + G DY ME LAR+
Sbjct: 196 VPFVFVSAAEARWTFKA-----PVAWLEDYLIAKRAVEARLREMTDAGE---VRAACLRPSLVYCLDKPAAMPAVGAFYLGNLLGLPFVDRPVTVDTLASAAVRCVEDGRSTGALDYREMERLARE 313
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Match: A0A7S0W2Z8_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W2Z8_9CRYP) HSP 1 Score: 116 bits (291), Expect = 1.790e-30 Identity = 59/103 (57.28%), Postives = 75/103 (72.82%), Query Frame = 2
Query: 245 PVEWLHAYLVAKRAVEDKLLNDLGGGDQPSLRPIVLRPSLVWTPSRPFALPPVAAFTIGNFLGLPFVDRPVRVDTLAAAAMAAVGDQAARGVFDYSRMEALAR 553
P EWLH YL+AKRAVE L+++ G +LRPI++RPSLVWT S+P + PV AFT+GN LGLPFVDRPV+V TLA + + A+ D G+FDY ME +AR
Sbjct: 5 PAEWLHRYLIAKRAVESDLIDNHGKSG--ALRPIIVRPSLVWTWSKPASFLPVGAFTVGNALGLPFVDRPVQVSTLAKSVVGAILDPKESGIFDYKGMERVAR 105
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Match: C1N367_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N367_MICPC) HSP 1 Score: 117 bits (294), Expect = 1.540e-28 Identity = 67/127 (52.76%), Postives = 82/127 (64.57%), Query Frame = 2
Query: 170 RRCLPMVFVSAAEARWTFDGAFVGTPVEWLHAYLVAKRAVEDKLLNDLGGGDQPSLRPIVLRPSLVWTPSRPFALPPVAAFTIGNFLGLPFVDRPVRVDTLAAAAMAAVGDQAARGVFDYSRMEALA 550
+R P VFVSAAEA+W F PVEWL YLVAKRAVE+KL G +LR +LRPSLV+ +P + P VAAF IGN +GLPFVDRPV LA AA+ AV ++A G+ DY +E L+
Sbjct: 201 KRSPPFVFVSAAEAKWDFRA-----PVEWLEEYLVAKRAVEEKLGAMTAAG---ALRATILRPSLVYAFDKPASFPAVAAFVIGNAIGLPFVDRPVTAGALATAAVRAVKEEAVEGILDYVGIEELS 319
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Match: A0A7S0QX38_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QX38_9CHLO) HSP 1 Score: 114 bits (285), Expect = 3.350e-27 Identity = 65/123 (52.85%), Postives = 85/123 (69.11%), Query Frame = 2
Query: 182 PMVFVSAAEARWTFDGAFVGTPVEWLHAYLVAKRAVEDKLLNDLGGGDQPSLRPIVLRPSLVWTPSRPFALPPVAAFTIGNFLGLPFVDRPVRVDTLAAAAMAAVGDQAARGVFDYSRMEALA 550
P VFVSAAEA WT D PV +L +YL AKRAVED+LLN+ G ++ RP++LRPSLV++ R +LP V AF +GN L LP +DRPV V+TLA AA+ A+ D++ GV ++ ME LA
Sbjct: 216 PFVFVSAAEAGWTQD-----PPVPFLVSYLKAKRAVEDELLNNYGASNK--FRPVILRPSLVYSMDRTASLPAVGAFFLGNMLKLPGIDRPVLVETLAKAALKAMEDESVAGVQNFEAMEDLA 331
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Match: A0A7S4JXS3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXS3_9STRA) HSP 1 Score: 103 bits (256), Expect = 4.160e-24 Identity = 62/133 (46.62%), Postives = 84/133 (63.16%), Query Frame = 2
Query: 170 RRCLPMVFVSAAEARWTF--DGAFVGTPVE--WLHAYLVAKRAVEDKL--LNDLGGGDQPSLRPIVLRPSLVWTPSRPFALPPVAAFTIGNFLGLPFVDRPVRVDTLAAAAMAAVGDQAARGVFDYSRMEALA 550
++ LP VF+SAAEA W G FV + W+ YL AKRAVE KL + GGG +RP++ RPSL+++ RP +LPPVAAF GN +GLPFVDRPV V L+ A + A+G GV ++ ++AL+
Sbjct: 72 KKALPFVFLSAAEAGWPDVPGGKFVENYLAPGWMRRYLSAKRAVEGKLEEVRQAGGGR--IVRPVIFRPSLIYSLDRPASLPPVAAFFAGNRIGLPFVDRPVTVQALSCAVVRAIGRDDVVGVQRFADVDALS 202 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6419.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6419.1.1 >prot_P-wetherbeei_contig6419.1.1 ID=prot_P-wetherbeei_contig6419.1.1|Name=mRNA_P-wetherbeei_contig6419.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp MTRSHVRRRWRRPKRSQPRHDQRRCLPMVFVSAAEARWTFDGAFVGTPVEback to top mRNA from alignment at P-wetherbeei_contig6419:118..1286+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6419.1.1 ID=mRNA_P-wetherbeei_contig6419.1.1|Name=mRNA_P-wetherbeei_contig6419.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1169bp|location=Sequence derived from alignment at P-wetherbeei_contig6419:118..1286+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6419:118..1286+ >mRNA_P-wetherbeei_contig6419.1.1 ID=mRNA_P-wetherbeei_contig6419.1.1|Name=mRNA_P-wetherbeei_contig6419.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig6419:118..1286+ (Phaeothamnion wetherbeei SAG_119_79)back to top |