mRNA_P-wetherbeei_contig6418.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6418.2.1 vs. uniprot
Match: A0A6H5JNT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT6_9PHAE) HSP 1 Score: 284 bits (726), Expect = 1.020e-88 Identity = 165/254 (64.96%), Postives = 190/254 (74.80%), Query Frame = 1
Query: 70 VSFGAPSHSPTMRPKSAPNTGRQSWIDKQASNSSIREILKTVTPNYVVTAVIKNRLEEGRLRAQKKKRKTRQMVLAAMDLRELQASQAASFMERLAMARMGFLDKAREVEEYIESERRSMQKQREQKEQAILAQKLAGLDVMHRRRMVGLETELAAELRGSWARAEKERADLRAKHRRQYNMLIEETAQRAYGGVSHCQASGVCCQKPYLCRHNKTASYNTRKPTRDVIRLRQNAERLRATGRIEEAEEFERQV 831
V+FG P AP+ G + +A ++EILKTVTPNYVVTAVIKNRLEEG+++AQKKKR+TRQ +LA MDLRELQ MERLAMARMGFLDKAREVE +IESER QK+RE+KEQAILAQKL GLD+ HRRR +GLE + A+ +LR KH+R+Y+MLIEETAQRAYGGVS CQ C+K YLCRHNKTASYNTRKPTR+VIRLRQNAERLRATGR+EEAEEFE Q
Sbjct: 3 VTFGPPGGGAAGAAPVAPSAGSG---NTKAHPPGVKEILKTVTPNYVVTAVIKNRLEEGKIKAQKKKRRTRQEILAGMDLRELQ-------MERLAMARMGFLDKAREVEVWIESERLKTQKEREEKEQAILAQKLGGLDISHRRRFIGLENKQGEGEAQFRAKXXXXXXELRLKHKREYDMLIEETAQRAYGGVSSCQ-----CEKTYLCRHNKTASYNTRKPTREVIRLRQNAERLRATGRVEEAEEFEIQA 241
BLAST of mRNA_P-wetherbeei_contig6418.2.1 vs. uniprot
Match: A0A836CAU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU2_9STRA) HSP 1 Score: 242 bits (617), Expect = 3.280e-73 Identity = 142/214 (66.36%), Postives = 166/214 (77.57%), Query Frame = 1
Query: 211 VTAVIKNRLEEGRLRAQKKKRKTRQMVLAAMDLRELQASQAASFMERLAMARMGFLDKAREVEEYIESERRSMQKQREQKEQAILAQKLAGLD-------VMHRRRMVGLETELAAELRGSWARAEKERADLRAKHRRQYNMLIEETAQRAYGGVSHCQASGVCCQKPYLCRHNKTASYNTRKPTRDVIRLRQNAERLRATGRIEEAEEFERQV 831
+TAVIKNRL+EG+LRAQ+KKRKTR +LAAMD+RELQ MERLAMARMGFLDKA+EVE IE ER +M K+RE++EQ+IL+QKL+ L + HRRR+V LE+ L EL+ + KE +D + KHRR+Y LIEETAQRAYGGVS CQ C+K YLCRHNKTASYNTRKPTRDVI LRQNAERLRATGRIEEAEEF+RQ
Sbjct: 1 MTAVIKNRLQEGQLRAQRKKRKTRAEILAAMDIRELQ-------MERLAMARMGFLDKAKEVENVIERERVTMLKEREEREQSILSQKLSSLGKYHHAKAMGHRRRLVALESRLTRELQQFLGKCAKELSDTKDKHRREYEALIEETAQRAYGGVSSCQ-----CRKRYLCRHNKTASYNTRKPTRDVISLRQNAERLRATGRIEEAEEFDRQA 202
BLAST of mRNA_P-wetherbeei_contig6418.2.1 vs. uniprot
Match: D8LM25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM25_ECTSI) HSP 1 Score: 144 bits (362), Expect = 4.820e-35 Identity = 77/155 (49.68%), Postives = 109/155 (70.32%), Query Frame = 1
Query: 358 MARMGFLDKAREVEEYIESERRSMQKQREQKEQAILAQKLAGLDVMHRRRMVGLETELAAELRGSWARAEKERADLRAKHRRQYNMLIEETAQRAYGGVSHCQASGVCCQKPYLCRHNKTASYNTRKPTRDVIRLRQNAERLRATGRIEEAEEFE 822
MARMGFLDKA E++ +E+ER ++K+R+Q++QA+L QK+ GL + H RR + + A + + E DL+ K +++Y++L+ ETA RA GGVS C C P+ CRHNK+ASYNTRKPT+DVIRLRQN +RLRA+GR+ EA+E +
Sbjct: 1 MARMGFLDKAEELDVMVEAERARLKKERDQQDQAVLDQKMNGLRMSHTRRSAAMTSAHEARIASLLEKCATEIEDLKVKQKKEYDVLVGETATRATGGVSSC-----VCTDPFKCRHNKSASYNTRKPTKDVIRLRQNGQRLRASGRLAEADEVD 150
BLAST of mRNA_P-wetherbeei_contig6418.2.1 vs. uniprot
Match: A0A835Z9J4_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9J4_9STRA) HSP 1 Score: 120 bits (302), Expect = 4.790e-27 Identity = 76/184 (41.30%), Postives = 104/184 (56.52%), Query Frame = 1
Query: 388 REVEEYIESERRSMQKQREQKEQAILAQKLAGLDVMHRRRMVGLETELAAELRGSWARAEKERADL------------------------------------------RAKHRRQYNMLIEETAQRAYGGVSHCQASGVCCQKPYLCRHNKTASYNTRKPTRDVIRLRQNAERLRATGRIEEAE 813
+++++ I++ER+ ++ +RE KE +++ +LAGL++ H+RR+ LE LA ELR AR +E D RAK +RQY +L+ ETA RA GG+S C C Y CRHNK+ASY+TRKPTRDVIRLRQNA+RLRA+GR EEAE
Sbjct: 190 KDIDDRIDAERQRLKAEREGKEASLMVHRLAGLELAHKRRITALEARLAEELRSLAARQAQELDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASALLCSGLLVVTRAKQKRQYELLVGETATRATGGISSCT-----CADAYACRHNKSASYSTRKPTRDVIRLRQNAQRLRASGRQEEAE 368
BLAST of mRNA_P-wetherbeei_contig6418.2.1 vs. uniprot
Match: D7G884_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G884_ECTSI) HSP 1 Score: 110 bits (276), Expect = 8.000e-24 Identity = 65/163 (39.88%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 346 ERLAMARMGFLDKAREVEEYIESERRSMQKQREQKEQAILAQKLAGLDVMHRRRMVGLETELAAELRGSWARAEKERADLRAKHRRQYNMLIEETAQRAYGGVSHCQASGVCCQKPYLCRHNKTASYNTRKPTRDVIRLRQNAERLRATGRIEEAEEFERQVS 834
ERL +AR+GF DKA E++E+IE R ++ +RE+ + IL ++LA L + HR ++ LE EL + + E+ERA L K +Q+ L+++ +RA G K YLC HNKTAS+NTR+P ++VI R+NA+RLR GR++E+ +E + +
Sbjct: 13 ERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEEELAALAIQHREKLASLEQELKEDEQKVSRSFERERAVLLRKQEKQFVQLVDDAIKRAIGK-----------SKKYLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLDESAAWEEKAA 164
BLAST of mRNA_P-wetherbeei_contig6418.2.1 vs. uniprot
Match: A0A836CD74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD74_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.940e-21 Identity = 63/166 (37.95%), Postives = 96/166 (57.83%), Query Frame = 1
Query: 346 ERLAMARMGFLDKAREVEEYIESERRSMQKQREQKEQAILAQKLAGLDVMHRRRMVGLETELAAE---LRGSWARAEKERADLRAKHRRQYNMLIEETAQRAYGGVSHCQASGVCCQKPYLCRHNKTASYNTRKPTRDVIRLRQNAERLRATGRIEEAEEFERQVS 834
ERL +AR+GF +KA E++E ++ R ++ +R +++ +L +L L H R LE + E +RG + +E+ LR KH ++ L+ +RA G C C K YLC HNKTASYNTR+P +DVI R+NA RL+ GR+EEA+ +E + +
Sbjct: 86 ERLIVARLGFPEKAMEIDEMVQKIRDDLKTERAAEDERVLMVELERLQEAHAARAEALEQRIGEEEQQMRGKFC---EEQRRLRKKHDSEFLDLVTAATKRAIGRSKSCS-----CTKKYLCTHNKTASYNTRRPKKDVIHYRRNASRLKHGGRLEEAKAWEEKAA 243
BLAST of mRNA_P-wetherbeei_contig6418.2.1 vs. uniprot
Match: A0A6H5KND4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KND4_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 3.540e-14 Identity = 55/146 (37.67%), Postives = 75/146 (51.37%), Query Frame = 1
Query: 481 GLDVMHRRRMVGLETELAAELRGSWARAEKERADLRAKHRRQYNML-----------IEETAQRAYGGVSHCQASGVCCQKPYLCRHNKTASYNTRKPTRDVIRLRQNA---------------------ERLRATGRIEEAEEFE 822
GL + H RR + + A + + E DL+ K +++Y++L + ETA RA GGVS C C P+ CRHNK+ASYNTRKPT+DVIRLRQN +RLRA+GR+ EA+E +
Sbjct: 3 GLRMSHTRRSAAMTSAQEARIASLLEKCAAEIEDLKDKQKKEYDVLASTNFVHCSMWVGETATRATGGVSSC-----VCTDPFKCRHNKSASYNTRKPTKDVIRLRQNVSRPRHSPAEPPLMWLFFVSRGQRLRASGRLAEADEVD 143
BLAST of mRNA_P-wetherbeei_contig6418.2.1 vs. uniprot
Match: A0A6C0BWQ3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BWQ3_9ZZZZ) HSP 1 Score: 75.5 bits (184), Expect = 9.110e-12 Identity = 50/159 (31.45%), Postives = 84/159 (52.83%), Query Frame = 1
Query: 346 ERLAMARMGFLDKAREVEEYIESERRSMQKQREQKEQAILAQKLAGLDVMHRRRMVGLETELAAELRGSWARAEKERADLRAKHRRQYNMLIEETAQRAYGGVSHCQASGVCCQKPYLCRHNKTASYNTRKPTRDVIRLRQNAERLRATGRIEEAEEFE 822
ERL ++R+GF +KA +++ IE R + R+ +E+ ++A+ L L + R+ L+ + E KHR ++ +IE +++ G + C C+ YLC HNKT+S+N RKP VI R+N++RL+ GR E+A + E
Sbjct: 82 ERLIISRLGFAEKAYALDKQIEVMREKAKVVRKAEEEKLMAEMLETLHKKNERKQQRLDAVIKQEHDEXXXXXXXXXXXXIEKHRTEFLKIIENAERKSIGKIKSCN-----CENDYLCHHNKTSSWNIRKPKPIVILYRKNSKRLKQGGRTEDAIQIE 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6418.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6418.2.1 >prot_P-wetherbeei_contig6418.2.1 ID=prot_P-wetherbeei_contig6418.2.1|Name=mRNA_P-wetherbeei_contig6418.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp MSLSFVPQPPGGEHREVSFGAPSHSPTMRPKSAPNTGRQSWIDKQASNSSback to top mRNA from alignment at P-wetherbeei_contig6418:1946..3397+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6418.2.1 ID=mRNA_P-wetherbeei_contig6418.2.1|Name=mRNA_P-wetherbeei_contig6418.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1452bp|location=Sequence derived from alignment at P-wetherbeei_contig6418:1946..3397+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6418:1946..3397+ >mRNA_P-wetherbeei_contig6418.2.1 ID=mRNA_P-wetherbeei_contig6418.2.1|Name=mRNA_P-wetherbeei_contig6418.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig6418:1946..3397+ (Phaeothamnion wetherbeei SAG_119_79)back to top |