mRNA_P-wetherbeei_contig6399.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A6H5JHB7_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB7_9PHAE) HSP 1 Score: 326 bits (836), Expect = 2.950e-106 Identity = 175/275 (63.64%), Postives = 216/275 (78.55%), Query Frame = 1
Query: 1 MSRGVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDVLVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGEADMDTELARKELLALQL 825
MSR + QP+ QVRLTNVA+VRL++ GKRFEIACYRNKVVNWRN++ETD+DEVLQI S+F+NVSKGVLAK KD++ AFGT ++ E C+ +IL+KGEMQVSDKERQ A++S FRD+ATIVSEKCV+P SNRPYTV MI+ AMRD+H++ TRSAKQQAL+VI++L VMPI RA M+LR+ D + P L+ AL LGVD G + E LD LVDPGL+R VEE VR GG+ ++VLQL+VQ+EGEADMD EL RKELLA++L
Sbjct: 1 MSRAITQPVNQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACR----IILDKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRISTDEDSTP-LKEALGELGVDSFENGGGAAAGSSGE-VLDFLVDPGLYRDVEEAVRTAAGGRCALEVLQLSVQQEGEADMDVELMRKELLAVKL 269
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A835Z759_9STRA (SBDS protein C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z759_9STRA) HSP 1 Score: 318 bits (815), Expect = 8.560e-104 Identity = 174/275 (63.27%), Postives = 215/275 (78.18%), Query Frame = 1
Query: 1 MSRGVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDVLVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGEADMDTELARKELLALQL 825
MSR VFQP+ QVRLTNVA+VR++R GKRFEIACYRNKVVNWRN++ETD++EVLQI ++FQNVSKGVLA KKD+ AFGT DE E+ + IL+KGE+QVSDKER+A +S FRD+ATIVSEKCV+P SNRPYTV MI+NAMRD+H+A +SAK QAL++I +L VMPIARA M LRV A A ++ A+L ALGV + RT AE ++DVLVDPGLFR +EE +R GG +V+VLQL+VQ+EGEAD+D E ARK +LALQ+
Sbjct: 1 MSRAVFQPVGQVRLTNVAVVRVTRTGKRFEIACYRNKVVNWRNRVETDLNEVLQITTVFQNVSKGVLANKKDMAKAFGTEDEDEIIR----YILDKGEVQVSDKERRAQYESAFRDVATIVSEKCVNPHSNRPYTVSMIENAMRDVHFAVAPNKSAKAQALELIPRLKEVMPIARASMLLRVTAPAALAQSVEASLSALGVTHFE----KQTRTEAEHSVDVLVDPGLFRGIEEALRGSGGGAARVEVLQLSVQQEGEADIDLEAARKGVLALQV 267
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: UPI001B88E1FB (LOW QUALITY PROTEIN: ribosome maturation protein SBDS-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88E1FB) HSP 1 Score: 261 bits (667), Expect = 4.660e-84 Identity = 138/262 (52.67%), Postives = 193/262 (73.66%), Query Frame = 1
Query: 10 GVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDV----LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGEADM 783
+F P Q+RLTNVAIVR+ + GKRFEIACY+NKVV+WRNK+E DIDEVLQ +++F NVSKG ++K+ D++ AFGT D++E+CK IL KGE+QVS++ERQA ++STFRDIATIV++KCV+P + RPYTVG+I+ AM+D+HYA TR+AKQQALDVIR L MP+ RA MR+R+V + +R +++L + +E+ +WT ++ L+DPG +R+++ELVR +T GQG V+VL L EEG+ +
Sbjct: 2 SIFTPTNQIRLTNVAIVRMKKGGKRFEIACYKNKVVSWRNKIEKDIDEVLQTHTVFTNVSKGQVSKRDDLVAAFGTDDQSEICKQ----ILSKGELQVSERERQAQLESTFRDIATIVADKCVNPETKRPYTVGLIERAMKDVHYAVKPTRNAKQQALDVIRLLKTHMPLERARMRMRLVLPVKEARRIREKIKSLLAN-------IEQE---DWTPNMEIICLIDPGAYREIDELVRSETKGQGTVEVLNLKDIEEGDESL 249
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A0C9Q0K3_9HYME (Ribosome maturation protein SBDS n=2 Tax=Opiinae TaxID=68883 RepID=A0A0C9Q0K3_9HYME) HSP 1 Score: 258 bits (660), Expect = 5.910e-83 Identity = 140/256 (54.69%), Postives = 186/256 (72.66%), Query Frame = 1
Query: 13 VFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDV--LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 774
+F PI Q+RLTNVA+VR+ + GKRFEIACYRNKVV+WRNKLE DIDEVLQ +++F NVSKG ++KK+D+L AFGT ++TE+CK IL KGE+QVSDKER +A+DS F+DIAT V++KCV+P S RPY V MI+ AM+D+H++ R+AKQQAL+VI QL +VMP+ RA MRLRVV + LR + + VE AE TLD+ L+DPG +RK++EL+R +T G G ++++ L EGE
Sbjct: 4 LFTPINQIRLTNVAVVRMKKQGKRFEIACYRNKVVSWRNKLEKDIDEVLQTHTVFTNVSKGQMSKKEDLLKAFGTDNQTEICKE----ILSKGELQVSDKERHSALDSMFKDIATTVADKCVNPDSKRPYPVSMIEKAMKDVHFSVKPHRNAKQQALEVIPQLKSVMPLERAQMRLRVVISGKEARKLRDKIVKMTTS-------VESENWAEGTLDLTCLIDPGNYRKIDELIRSETRGTGILELVNLKEVTEGE 248
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A7M7R6S1_APIME (Ribosome maturation protein SBDS n=21 Tax=Apoidea TaxID=34735 RepID=A0A7M7R6S1_APIME) HSP 1 Score: 258 bits (658), Expect = 1.310e-82 Identity = 139/259 (53.67%), Postives = 186/259 (71.81%), Query Frame = 1
Query: 13 VFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEW---TLDV--LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 774
+F P Q+RLTNVA+VR+ +AGKRFEIACYRNKV++WRNKLE DIDEVLQ +++F NVSKG +AKK+D++ AFGT ++TE+CK IL KGE+QVSDKER +A+DS F+DIAT V+ KC++P + RPYT+ MI+ AM+D+H++ R+AKQQALDVI QL AVMP+ RA MRLRV+ + LR +E L V + EW TLD+ L+DPG +R++ ELVR +T G G +++L L EG+
Sbjct: 7 IFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFINVSKGQVAKKEDLIKAFGTDNQTEICKE----ILTKGELQVSDKERHSALDSMFKDIATTVANKCINPETKRPYTITMIEKAMKDVHFSVKPNRNAKQQALDVIPQLKAVMPLERAQMRLRVLVSGKEAKKLRDKIEKL----------VTKLETEEWDNGTLDLVCLIDPGHYREINELVRSETKGSGLLELLNLKEIVEGD 251
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A7M7G5I7_NASVI (Ribosome maturation protein SBDS n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7G5I7_NASVI) HSP 1 Score: 257 bits (656), Expect = 2.380e-82 Identity = 138/256 (53.91%), Postives = 185/256 (72.27%), Query Frame = 1
Query: 13 VFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDV--LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 774
+F P+ Q+RLTNVA+VR+ +AGKRFEIACYRNKV++WRNKLE DIDEVLQ +++F NVSKG +AKK+D++ AFG D+TE+CK ILEKGE+QVSDKER +A+DS F+DIAT V++KCV+P S RPY+V +I+ AM+DIH++ R+AKQQAL+VI QL VMP+ RA MRLRV+ + LR + L VE +LD+ L+DPG +R+++ELVR +T G G +++L L EGE
Sbjct: 4 IFTPVNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFMNVSKGQVAKKEDLIKAFGKDDQTEICKE----ILEKGELQVSDKERHSALDSMFKDIATTVADKCVNPESKRPYSVSLIEKAMKDIHFSVKPNRNAKQQALEVITQLKTVMPLERAQMRLRVLVSGKEARKLREKIVKLTTK-------VESEDWNSGSLDLVCLIDPGHYREIDELVRAETKGSGVLELLNLKEITEGE 248
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: UPI000771B1AA (ribosome maturation protein SBDS n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B1AA) HSP 1 Score: 254 bits (649), Expect = 2.740e-81 Identity = 138/254 (54.33%), Postives = 180/254 (70.87%), Query Frame = 1
Query: 13 VFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDVLVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 774
+F PI Q+RLTNVA+VR+ + GKRFEIACYRNKVV+WRNKLE DI+EVLQ +++F NVSKG +AKK+D++ AFG D+TE+CK ILEKGE+QVSDKER +A+DS +DIAT V+EKCV+P + RPY V MI+ AM+DIH++ R+AKQQALDVI+QL VMP+ RA MRLRV+ + LR + L S E L L+DPG +R+++ELVR +T G G +++L L EGE
Sbjct: 4 IFTPINQIRLTNVAVVRMKKGGKRFEIACYRNKVVSWRNKLEKDINEVLQTHTVFTNVSKGQVAKKEDLIKAFGKEDQTEICKD----ILEKGELQVSDKERHSALDSMLKDIATTVAEKCVNPETKRPYPVSMIEKAMKDIHFSVKPNRNAKQQALDVIQQLKTVMPLERAQMRLRVLITGKEARKLREKIMKLAAKVES-----EDWDSGSLNLICLIDPGQYREIDELVRSETKGHGILELLNLKEVTEGE 248
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A4D9CZ78_9STRA (C2H2-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ78_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.810e-80 Identity = 150/269 (55.76%), Postives = 194/269 (72.12%), Query Frame = 1
Query: 1 MSRGVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADA-EGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDVLVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGEADMDTELARK 804
MSR + QP+ QVRLTNVA+VR+ + GKRFEIACYRNKV++WR +E DIDEVLQ ++IF NVSKGVLA KD++D FG D + + +ILEKGE SDKER+A +S +RDIATIV+ K V+PTSNRPYTV MI + M+DIH+A TR AKQQAL+VIR+L VMP+ RA MRL+VV E + + + G+D G T + +D+LVDPGLFR+V+ELVR + G+G + VL+L+VQ+EGEAD+D E+ARK
Sbjct: 1 MSRRIGQPVNQVRLTNVAMVRVHKGGKRFEIACYRNKVLSWRQGVEKDIDEVLQTHAIFLNVSKGVLASSKDLMDCFGQDDVEALLR----LILEKGEYHPSDKEREAMHESLYRDIATIVAIKSVNPTSNRPYTVNMILSGMKDIHFAVNPTRGAKQQALEVIRRLQDVMPLERAKMRLKVVCPTTEDLAQVVEGMASFGID-----GNTVEATGKKEEVDLLVDPGLFRRVDELVRGK--GKGALHVLELSVQQEGEADVDLEIARK 258
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A1X7V953_AMPQE (Ribosome maturation protein SBDS n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V953_AMPQE) HSP 1 Score: 251 bits (642), Expect = 2.940e-80 Identity = 137/259 (52.90%), Postives = 186/259 (71.81%), Query Frame = 1
Query: 10 GVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWT--LDV--LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 774
+F P Q+RLTNVAIVR+ + GKRFEIACY+NKVV+WRNK+E DIDEVLQ +++F NVSKG +AK+ D+ AFGT D+TE+CK IL KGE+Q+S++ERQ+ ++S FRDI+TIV++KCV+P + RPYTVGMI+ AM+D+HYA TRSAKQQ+LDVIR L MP+ RA MRL++V + +R + L +VE+ +W L++ L+DPG FR+++E+VR T G G V+VL L EEG+
Sbjct: 2 SIFTPTNQIRLTNVAIVRIKKGGKRFEIACYKNKVVSWRNKVEKDIDEVLQTHTVFNNVSKGQVAKRDDLASAFGTEDQTEICKT----ILSKGELQISERERQSQLESLFRDISTIVADKCVNPDTKRPYTVGMIERAMKDVHYAVKPTRSAKQQSLDVIRLLKDHMPLERARMRLKLVLPVKEARKVREKIVGL-------LASVEQE---DWRPQLEIVCLIDPGRFREIDEIVRGDTKGSGIVEVLNLKDVEEGD 246
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A834JRM0_VESGE (Ribosome maturation protein SBDS n=4 Tax=Vespinae TaxID=7439 RepID=A0A834JRM0_VESGE) HSP 1 Score: 251 bits (642), Expect = 3.140e-80 Identity = 138/256 (53.91%), Postives = 180/256 (70.31%), Query Frame = 1
Query: 13 VFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDV--LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 774
+F P Q+RLTNVAIVR+ + GKRFEIACY+NKVV+WRNKLE DIDEVLQ +++F NVSKG +AKK+D++ +FGT D+TE+CK IL KGE+QVSDKER A+DS F+DIAT V++KCV+P S RPY V MI+ AM+D+H++ R+AKQQALDVI QL AVMP+ RA MRL+V + LR + L VE TLD+ L+DPG FR+++ELVR +T G +++L L EG+
Sbjct: 4 IFTPTNQIRLTNVAIVRMKKTGKRFEIACYKNKVVSWRNKLEKDIDEVLQTHTVFTNVSKGQVAKKEDLIKSFGTDDQTEICKE----ILAKGELQVSDKERHLALDSMFKDIATTVADKCVNPESKRPYPVSMIEKAMKDVHFSVKPNRNAKQQALDVIPQLKAVMPLERAQMRLKVTISGKEARKLREKIIKLATK-------VESENWDNGTLDLICLIDPGQFREIDELVRSETKRTGLLELLNLKEIAEGD 248 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6399.1.1 >prot_P-wetherbeei_contig6399.1.1 ID=prot_P-wetherbeei_contig6399.1.1|Name=mRNA_P-wetherbeei_contig6399.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=282bp MSRGVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDback to top mRNA from alignment at P-wetherbeei_contig6399:60..2440+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6399.1.1 ID=mRNA_P-wetherbeei_contig6399.1.1|Name=mRNA_P-wetherbeei_contig6399.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2381bp|location=Sequence derived from alignment at P-wetherbeei_contig6399:60..2440+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6399:60..2440+ >mRNA_P-wetherbeei_contig6399.1.1 ID=mRNA_P-wetherbeei_contig6399.1.1|Name=mRNA_P-wetherbeei_contig6399.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=846bp|location=Sequence derived from alignment at P-wetherbeei_contig6399:60..2440+ (Phaeothamnion wetherbeei SAG_119_79)back to top |