mRNA_P-wetherbeei_contig6191.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Match: A0A6H5KZB1_9PHAE (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZB1_9PHAE) HSP 1 Score: 112 bits (281), Expect = 4.470e-24 Identity = 62/107 (57.94%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 244 QPMAAVSSGTDALNANNLEAAILDVNPDEAIEMRQKQRVLHWDKRKHKYIKTSVAELAEQR--GAKKIRTESGVVVRGKDAKQNKGELYDAWKKRSHRAVGRLGEEE 558
QP + SG D A LE AILDVNPDEA++M +KQR+LHWD RK K++KT++AEL E++ G++KIRTESGVVV+ K+A Q GE+Y WK+ S+R VGR G+EE
Sbjct: 792 QPRSVEKSG-DGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELGERKTGGSRKIRTESGVVVKAKNAPQ--GEIYAKWKRASNRQVGREGDEE 895
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Match: A0A835Z3G9_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G9_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.000e-21 Identity = 83/219 (37.90%), Postives = 117/219 (53.42%), Query Frame = 1
Query: 244 QPMAAVSSGTDALNANNLEAAILDVNPDEAIEMRQKQRVLHWDKRKHKYIKTSVAELAEQRGAKKIRTESGVVVRGKDAKQNKGELYDAWKKRSHRAVGRLGEEEAARGPR-----------PAGGGGGAYGRNSXXXXRYGPGGGEVANANAKDELRGKAQMRKEKKKVEFLKLKNMPAAKRRAVASKQKAAYMAKRGAKERSPAQGGGALRRRSRQL 867
QP + +G D + L A+LDVNPDEA++M +KQRVLHWD RKHK++KTS+AE+++ + + +R E+GV+V K KQ GE++ W+K+S R VGR G+EE P G GGA G A A+DELR Q+RK + K + L++MP KR A + KA + + K + QG R RSR +
Sbjct: 730 QPRSVEKAG-DGFATDRLAEAMLDVNPDEAVDMVRKQRVLHWDARKHKFVKTSLAEMSDNK-KRTVRNEAGVMVTAK--KQKAGEIFSKWQKKSRREVGREGDEEXXXXXXXXXXXXXXXXXPRGAKGGAAG---------------APGARARDELRSAGQVRKLRDKQKNDALRSMPKEKRAAALRRSKADFQRRAAEKRAASFQG----RTRSRAI 925
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Match: W7TM98_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM98_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.550e-20 Identity = 51/101 (50.50%), Postives = 74/101 (73.27%), Query Frame = 1
Query: 256 AVSSGTDALNANNLEAAILDVNPDEAIEMRQKQRVLHWDKRKHKYIKTSVAELAEQRGAKKIRTESGVVVRGKDAKQNKGELYDAWKKRSHRAVGRLGEEE 558
+V G++AL AN LE A+LDV PDEA+EM +++R++HWD RK KY++ +++EL E RG KK+RTESGV V G + Q GE+Y W+KR+++ V G +E
Sbjct: 784 SVEKGSEALLANRLEEALLDVQPDEALEMVKRKRIMHWDARKKKYVRATMSELGEGRGQKKLRTESGVTVSG--SSQATGEIYKKWQKRTNKTVSLAGGDE 882
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Match: A0A7S4DFA2_HETAK (RNA helicase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFA2_HETAK) HSP 1 Score: 90.1 bits (222), Expect = 5.250e-18 Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = 1
Query: 295 LEAAILDVNPDEAIEMRQKQRVLHWDKRKHKYIKTSVAELAEQRGAKKIRTESGVVVRGKDAKQNKGELYDAWKKRSHRAVGRLG-EEEAA 564
LE ++LD+NPD A EM +K++ +HWD RK KYIKT+V ELA+QRG K+RTESG +V K GELY WK ++H+ V G EEEAA
Sbjct: 102 LEDSLLDINPDTAQEMHKKKQFMHWDARKKKYIKTTVQELAKQRGNSKLRTESGAIVNKKVVPT--GELYQKWKSKTHKEVAGEGIEEEAA 190
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Match: A0A7S3LXT9_9STRA (RNA helicase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LXT9_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.280e-16 Identity = 59/174 (33.91%), Postives = 102/174 (58.62%), Query Frame = 1
Query: 244 QPMAAVSSGTDALNANNLEAAILDVNPDEAIEMRQKQRVLHWDKRKHKYIKTSVAELAE--QRGAKKIRTESGVVVRGKDAKQNKGELYDAWKKRSHRAVGRLGEEEAARGPRPAGGGGGAYGRNSXXXXRYGPGGGEVANANAKDELRGKAQMRKEKKKVEFLKLKNMPAAKR 759
QP + + S ++++NA ++ A+LD++PD+A+++ K+R+L WD +K K++K ++ E+AE +RG K++RTE+G++ K + +GE+Y+ WKKR+H+ +G G P G R GP N+ +DELR +++R K + +KLKNM KR
Sbjct: 313 QPQSNLRS-SESMNAMKMDRALLDISPDDAVDLNNKKRILRWDAKKRKFVKQTLQEMAENQKRGVKRMRTETGII--SKKSALPQGEMYEKWKKRTHKEIG---------GNDPDAG-----------TTRMGPN--VKVNSKVRDELRSASEIRSLKAGKDNMKLKNMKKDKR 461
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Match: H3GSH8_PHYRM (RNA helicase n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GSH8_PHYRM) HSP 1 Score: 87.8 bits (216), Expect = 1.320e-15 Identity = 65/152 (42.76%), Postives = 83/152 (54.61%), Query Frame = 1
Query: 295 LEAAILDVNPDEAIEMRQKQRVLHWDKRKHKYIKTSVAELAEQRGAKKIRTESGVVVRGKDAKQNKGELYDAWKKRSHRAVGRLGEE------------EAARGPRPAGGGGGAYGRNSXXXXRYGPGGGEVANANAKDELRGKAQMRKEKK 714
LE AILDVNPDEAIEM +K+R+LHWD RK K++KT+ EL Q G K R ESGV VR KQ GE+Y W+++ H+ V G E + G +P GG G+ S N NAKDEL + ++RKE+K
Sbjct: 658 LEEAILDVNPDEAIEMNKKRRILHWDVRKKKFVKTTAGELTSQ-GTLKRRNESGVNVR---KKQQVGEVYRKWQQKQHKRVAGGGVEIEDDDDTSSRKLDYRHGRKPRGGAA-VMGKRSS------------VNKNAKDELMSEGKIRKEEK 792
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Match: A0A7S2WEZ0_9STRA (RNA helicase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEZ0_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.430e-15 Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 316 VNPDEAIEMRQKQRVLHWDKRKHKYIKTSVAELAE-QRGAKKIRTESGVVVRGKDAKQNKGELYDAWKKRSHRAV 537
+ PDE E +KQR+ HWDKRK KY+K S++E+A+ QRGAKK+RTESG V K K++ GELY WK+ + R++
Sbjct: 1 LTPDETSEQWKKQRLYHWDKRKRKYVKQSISEMADSQRGAKKLRTESGASVLSKKMKESAGELYQKWKQSTRRSI 75
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Match: D0N6Y7_PHYIT (RNA helicase n=6 Tax=Phytophthora TaxID=4783 RepID=D0N6Y7_PHYIT) HSP 1 Score: 86.3 bits (212), Expect = 4.370e-15 Identity = 65/149 (43.62%), Postives = 83/149 (55.70%), Query Frame = 1
Query: 295 LEAAILDVNPDEAIEMRQKQRVLHWDKRKHKYIKTSVAELAEQRGAKKIRTESGVVVRGKDAKQNKGELYDAWKKRSHRAVGRLG---EEEAARGPRPAGGGGGAYGRNSXXXXRYGPGGGEV------ANANAKDELRGKAQMRKEKK 714
LE AILDVNPDEAIEM +K+R+LHWD RK K++KT+ EL Q G K R ESGV VR KQ GE+Y W+++ H+ V G E++ G GR P GG V N +AKDEL + ++RKE+K
Sbjct: 673 LEEAILDVNPDEAIEMNKKRRILHWDVRKKKFVKTTAGELTSQ-GTLKRRNESGVSVR---KKQQVGEVYRKWQQKQHKRVAGGGVEVEDDDNTG-----------GRKLDYRNGRKPRGGAVMAKRSGVNKHAKDELMSEGKIRKEEK 806
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Match: A0A662XA09_9STRA (RNA helicase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XA09_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.040e-14 Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 295 LEAAILDVNPDEAIEMRQKQRVLHWDKRKHKYIKTSVAELAEQRGAKKIRTESGVVVRGKDAKQNKGELYDAWKKRSHRAV 537
LE AILDVNPDEAIEM +K+R+LHWD RK K++KT+ EL Q G K R ESGV VR KQ GE+Y W+++ H+ V
Sbjct: 348 LEEAILDVNPDEAIEMNKKRRILHWDVRKKKFVKTTAGELTSQ-GTLKRRNESGVSVR---KKQQVGEVYRKWQQKQHKRV 424
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Match: A0A484EF95_BRELC (RNA helicase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF95_BRELC) HSP 1 Score: 81.3 bits (199), Expect = 4.230e-14 Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 295 LEAAILDVNPDEAIEMRQKQRVLHWDKRKHKYIKTSVAELAEQRGAKKIRTESGVVVRGKDAKQNKGELYDAWKKRSHRAV 537
LE AILDVNPDEAIEM +K+R+LHWD RK K++KT+ EL Q G K R ESGV R KQ GE+Y W+++ H+ V
Sbjct: 114 LEEAILDVNPDEAIEMNKKRRILHWDVRKKKFVKTTAGELTSQ-GTLKRRNESGVNFR---KKQQFGEVYRKWQQKQHKRV 190 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6191.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6191.1.1 >prot_P-wetherbeei_contig6191.1.1 ID=prot_P-wetherbeei_contig6191.1.1|Name=mRNA_P-wetherbeei_contig6191.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=212bp MAAVSSGTDALNANNLEAAILDVNPDEAIEMRQKQRVLHWDKRKHKYIKTback to top mRNA from alignment at P-wetherbeei_contig6191:142..1583+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6191.1.1 ID=mRNA_P-wetherbeei_contig6191.1.1|Name=mRNA_P-wetherbeei_contig6191.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1442bp|location=Sequence derived from alignment at P-wetherbeei_contig6191:142..1583+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6191:142..1583+ >mRNA_P-wetherbeei_contig6191.1.1 ID=mRNA_P-wetherbeei_contig6191.1.1|Name=mRNA_P-wetherbeei_contig6191.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=636bp|location=Sequence derived from alignment at P-wetherbeei_contig6191:142..1583+ (Phaeothamnion wetherbeei SAG_119_79)back to top |