prot_P-wetherbeei_contig6187.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6187.1.1
Unique Nameprot_P-wetherbeei_contig6187.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length148
Homology
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A6H5JEX9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX9_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 8.780e-69
Identity = 105/144 (72.92%), Postives = 117/144 (81.25%), Query Frame = 0
Query:    1 MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREV 144
            M   G VVSAEVQ HADSGRSKGWGLVTY+ PA A AAI+ L NA+L  RP+HIRLDR +V+ SGGF VFVGNLPWSTTDE+L  +FA + PYD HVKTNMAGRSRGF ILRFA PE G+RAI+EM N QI  RPIQVREDRE+
Sbjct:   50 MGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREI 193          
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A835ZG94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG94_9STRA)

HSP 1 Score: 216 bits (550), Expect = 7.020e-68
Identity = 105/147 (71.43%), Postives = 119/147 (80.95%), Query Frame = 0
Query:    1 MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREVPAG 147
            M+  G+V+S+ VQCHADSGRSKGWGLV YS+  EA AAI+ L NAEL  R VH+RLDRS +DTSGGFAVFVGNLPWSTT E+L  +FA F PYD HVKTNMAGRSRGFAILRF+ PE G++AIA MN   I GRPIQVREDR+V  G
Sbjct:   27 MASVGTVLSSAVQCHADSGRSKGWGLVEYSTDGEAMAAIEQLNNAELGGRAVHVRLDRSNIDTSGGFAVFVGNLPWSTTTEDLQTLFAQFQPYDVHVKTNMAGRSRGFAILRFSAPEPGQQAIAAMNGFDIDGRPIQVREDRDVGGG 173          
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: D8LK87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK87_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 6.700e-67
Identity = 105/144 (72.92%), Postives = 117/144 (81.25%), Query Frame = 0
Query:    1 MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREV 144
            M   G VVSAEVQ HADSGRSKGWGLVTY+ PA A AAI+ L NA+L  RP+HIRLDR +V+ SGGF VFVGNLPWSTTDE+L  +FA + PYD HVKTNMAGRSRGF ILRFA PE G+RAI+EM N QI  RPIQVREDRE+
Sbjct:   72 MGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREI 215          
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A835YWJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ3_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.090e-64
Identity = 100/148 (67.57%), Postives = 116/148 (78.38%), Query Frame = 0
Query:    1 MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREVPAGG 148
            M+  G +VS+EVQCHADSGRSKGWGLV YS+P EA AAI+ L NA+L  R VH+R DR+ ++TSGGFAVFVGNLPWS TD +L+A+FA F P+DAHVKTNM GRSRGF ILRF  PE GR AI  MN  +I+GR IQVREDRE    G
Sbjct:   27 MASQGEIVSSEVQCHADSGRSKGWGLVQYSTPEEATAAIELLNNADLGGRSVHLRFDRTTIETSGGFAVFVGNLPWSVTDLDLTALFAKFNPFDAHVKTNMTGRSRGFGILRFHSPEEGREAIEAMNGFEIEGRHIQVREDREGEVRG 174          
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A7S2V6P6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6P6_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.120e-53
Identity = 88/148 (59.46%), Postives = 108/148 (72.97%), Query Frame = 0
Query:    1 MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREVPAGG 148
            MS+ G+VVSA+VQ HADSGRSKGWGLV YS+  EA+ AI  L +  L  R +H+RLDRS +D + G +VFVGNLPWSTT E L+ +F  + P+D HVKTNMAGRSRGFAILRF + +    AI +MN   ++ R IQVREDR V  GG
Sbjct:   26 MSQCGNVVSADVQAHADSGRSKGWGLVEYSTAEEAQNAIQLLNSTTLQERQIHVRLDRSNLDETAGVSVFVGNLPWSTTSETLAELFGSYEPFDVHVKTNMAGRSRGFAILRFNNQDQANAAITDMNGYNLEERNIQVREDRGVAEGG 173          
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A7S2DGC6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGC6_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.360e-47
Identity = 79/144 (54.86%), Postives = 102/144 (70.83%), Query Frame = 0
Query:    1 MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREV 144
            M+  G+V S +VQ HAD+GRSKGW LVTY++  E    I      E + R +++R DRS+++   GF VFVGNLPWSTT E+LS +F DFGP+D HVKT MAGRSRGFAILRF   E  ++A A MN  +++GR I+VREDR+ 
Sbjct:   54 MANYGTVASCQVQAHADTGRSKGWALVTYTTAEECTYTIQQTNGQEFNGRNLNVRQDRSQMEELSGFPVFVGNLPWSTTSEDLSDLFRDFGPFDVHVKTTMAGRSRGFAILRFESLEVAQQATAAMNGHELEGRSIEVREDRQT 197          
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A6U4FSY9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FSY9_9STRA)

HSP 1 Score: 161 bits (408), Expect = 6.020e-47
Identity = 76/138 (55.07%), Postives = 97/138 (70.29%), Query Frame = 0
Query:    5 GSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDR 142
            G V++A VQ HADS RSKGWGL TY++P  A  A+  L  +EL  RPVH+R DRSK++  GG  +FVGN+PW  T E+L   F  F P D HVKTNMAGRSRGFAI +F + E    A+A+MN  +++GR +QVRED+
Sbjct:   28 GEVLNASVQRHADSQRSKGWGLATYAAPEGAALAVSQLDQSELKGRPVHVRFDRSKIENVGGVNIFVGNIPWEITSEQLYESFFPFQPIDVHVKTNMAGRSRGFAIAKFPNQELADAAVAQMNGKELQGRQLQVREDK 165          
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A7S2GAK8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GAK8_9STRA)

HSP 1 Score: 154 bits (390), Expect = 8.530e-44
Identity = 76/140 (54.29%), Postives = 96/140 (68.57%), Query Frame = 0
Query:    5 GSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREV 144
            G+V+S EVQ HAD+GRSKGW LVTYS+  EA  AI  L   + + RP+++R+DRS V+  GG  VFVGNLPWSTT+E+L  +F  F P+D +VKT M GRSRGFAI+RF  PE    AI  M     +GR + VR DR +
Sbjct:   47 GNVLSVEVQSHADTGRSKGWALVTYSTSEEAAVAITQLHGHDFNDRPLNVRVDRSNVEQMGGTLVFVGNLPWSTTNEQLLELFGQFNPFDVNVKTTMNGRSRGFAIVRFDTPERAEVAIGTMQGFIFEGRTLDVRIDRPL 186          
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: K8YWK2_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWK2_NANGC)

HSP 1 Score: 151 bits (381), Expect = 3.350e-43
Identity = 69/142 (48.59%), Postives = 98/142 (69.01%), Query Frame = 0
Query:    1 MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDR 142
            M  AG V+  EVQ H+D+GRSKGW LVT+ +  +A  A++ L   E++ RP+++R DR++++   GF VFVGNLPW  T   L  +F++F PYD H+KTNM+GRSRGF +LRF   E  +RAI +M+ + ++ R I VR DR
Sbjct:   23 METAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 164          
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A4D9CR95_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR95_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.380e-41
Identity = 69/142 (48.59%), Postives = 98/142 (69.01%), Query Frame = 0
Query:    1 MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDR 142
            M  AG V+  EVQ H+D+GRSKGW LVT+ +  +A  A++ L   E++ RP+++R DR++++   GF VFVGNLPW  T   L  +F++F PYD H+KTNM+GRSRGF +LRF   E  +RAI +M+ + ++ R I VR DR
Sbjct:    1 METAGRVLDVEVQAHSDTGRSKGWALVTFEAAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFRPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEX9_9PHAE8.780e-6972.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZG94_9STRA7.020e-6871.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LK87_ECTSI6.700e-6772.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YWJ3_9STRA3.090e-6467.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V6P6_9STRA1.120e-5359.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2DGC6_9STRA1.360e-4754.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6U4FSY9_9STRA6.020e-4755.07Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2GAK8_9STRA8.530e-4454.29Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
K8YWK2_NANGC3.350e-4348.59Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CR95_9STRA1.380e-4148.59Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 1..55
e-value: 0.67
score: 8.1
coord: 68..139
e-value: 4.5E-22
score: 89.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 2..53
e-value: 1.6E-7
score: 31.1
coord: 69..136
e-value: 2.3E-17
score: 62.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 1..59
score: 10.667186
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 67..143
score: 15.732639
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..65
e-value: 1.3E-12
score: 49.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 66..148
e-value: 2.6E-21
score: 78.1
NoneNo IPR availablePANTHERPTHR23003:SF3FI21236P1coord: 2..142
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 2..142
NoneNo IPR availableCDDcd00590RRM_SFcoord: 69..139
e-value: 1.19936E-22
score: 83.1233
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 2..63
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 63..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6187contigP-wetherbeei_contig6187:5..1229 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6187.1.1mRNA_P-wetherbeei_contig6187.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6187 5..1804 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6187.1.1 ID=prot_P-wetherbeei_contig6187.1.1|Name=mRNA_P-wetherbeei_contig6187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSR
PVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTN
MAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREVPAGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf