mRNA_P-wetherbeei_contig6187.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A6H5JEX9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX9_9PHAE) HSP 1 Score: 251 bits (640), Expect = 1.470e-79 Identity = 121/165 (73.33%), Postives = 136/165 (82.42%), Query Frame = 3
Query: 513 TSTVFVGNLSWSTTNDDLREFMSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREV 1007
+STVFVGNLSW TT++DLR FM G VVSAEVQ HADSGRSKGWGLVTY+ PA A AAI+ L NA+L RP+HIRLDR +V+ SGGF VFVGNLPWSTTDE+L +FA + PYD HVKTNMAGRSRGF ILRFA PE G+RAI+EM N QI RPIQVREDRE+
Sbjct: 29 SSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREI 193
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A835ZG94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG94_9STRA) HSP 1 Score: 249 bits (636), Expect = 7.410e-78 Identity = 120/170 (70.59%), Postives = 138/170 (81.18%), Query Frame = 3
Query: 507 ADTSTVFVGNLSWSTTNDDLREFMSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREVPAG 1016
A TVFVGNL+W+TT D+LR+FM+ G+V+S+ VQCHADSGRSKGWGLV YS+ EA AAI+ L NAEL R VH+RLDRS +DTSGGFAVFVGNLPWSTT E+L +FA F PYD HVKTNMAGRSRGFAILRF+ PE G++AIA MN I GRPIQVREDR+V G
Sbjct: 4 AGNRTVFVGNLAWNTTADELRDFMASVGTVLSSAVQCHADSGRSKGWGLVEYSTDGEAMAAIEQLNNAELGGRAVHVRLDRSNIDTSGGFAVFVGNLPWSTTTEDLQTLFAQFQPYDVHVKTNMAGRSRGFAILRFSAPEPGQQAIAAMNGFDIDGRPIQVREDRDVGGG 173
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: D8LK87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK87_ECTSI) HSP 1 Score: 251 bits (640), Expect = 1.400e-77 Identity = 121/165 (73.33%), Postives = 136/165 (82.42%), Query Frame = 3
Query: 513 TSTVFVGNLSWSTTNDDLREFMSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREV 1007
+STVFVGNLSW TT++DLR FM G VVSAEVQ HADSGRSKGWGLVTY+ PA A AAI+ L NA+L RP+HIRLDR +V+ SGGF VFVGNLPWSTTDE+L +FA + PYD HVKTNMAGRSRGF ILRFA PE G+RAI+EM N QI RPIQVREDRE+
Sbjct: 51 SSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREI 215
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A835YWJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ3_9STRA) HSP 1 Score: 241 bits (616), Expect = 7.870e-75 Identity = 115/171 (67.25%), Postives = 137/171 (80.12%), Query Frame = 3
Query: 507 ADTSTVFVGNLSWSTTNDDLREFMSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREVPAGG 1019
A+ TVFVGNLSW+TT+++LR+FM+ G +VS+EVQCHADSGRSKGWGLV YS+P EA AAI+ L NA+L R VH+R DR+ ++TSGGFAVFVGNLPWS TD +L+A+FA F P+DAHVKTNM GRSRGF ILRF PE GR AI MN +I+GR IQVREDRE G
Sbjct: 4 ANNRTVFVGNLSWNTTSEELRDFMASQGEIVSSEVQCHADSGRSKGWGLVQYSTPEEATAAIELLNNADLGGRSVHLRFDRTTIETSGGFAVFVGNLPWSVTDLDLTALFAKFNPFDAHVKTNMTGRSRGFGILRFHSPEEGREAIEAMNGFEIEGRHIQVREDREGEVRG 174
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A7S2V6P6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6P6_9STRA) HSP 1 Score: 214 bits (546), Expect = 2.530e-64 Identity = 103/170 (60.59%), Postives = 127/170 (74.71%), Query Frame = 3
Query: 510 DTSTVFVGNLSWSTTNDDLREFMSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREVPAGG 1019
+ TVFVGNL WSTTN++L+EFMS+ G+VVSA+VQ HADSGRSKGWGLV YS+ EA+ AI L + L R +H+RLDRS +D + G +VFVGNLPWSTT E L+ +F + P+D HVKTNMAGRSRGFAILRF + + AI +MN ++ R IQVREDR V GG
Sbjct: 4 EMKTVFVGNLKWSTTNEELQEFMSQCGNVVSADVQAHADSGRSKGWGLVEYSTAEEAQNAIQLLNSTTLQERQIHVRLDRSNLDETAGVSVFVGNLPWSTTSETLAELFGSYEPFDVHVKTNMAGRSRGFAILRFNNQDQANAAITDMNGYNLEERNIQVREDRGVAEGG 173
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A7S2DGC6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGC6_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.690e-57 Identity = 93/163 (57.06%), Postives = 120/163 (73.62%), Query Frame = 3
Query: 519 TVFVGNLSWSTTNDDLREFMSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREV 1007
T+FVGNLSW+TTN++L EFM+ G+V S +VQ HAD+GRSKGW LVTY++ E I E + R +++R DRS+++ GF VFVGNLPWSTT E+LS +F DFGP+D HVKT MAGRSRGFAILRF E ++A A MN +++GR I+VREDR+
Sbjct: 35 TLFVGNLSWATTNEELSEFMANYGTVASCQVQAHADTGRSKGWALVTYTTAEECTYTIQQTNGQEFNGRNLNVRQDRSQMEELSGFPVFVGNLPWSTTSEDLSDLFRDFGPFDVHVKTTMAGRSRGFAILRFESLEVAQQATAAMNGHELEGRSIEVREDRQT 197
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A6U4FSY9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FSY9_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.560e-54 Identity = 85/164 (51.83%), Postives = 116/164 (70.73%), Query Frame = 3
Query: 510 DTSTVFVGNLSWSTTNDDLREFMSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDR 1001
+ + +++GNL+W TT+++L EF+ G V++A VQ HADS RSKGWGL TY++P A A+ L +EL RPVH+R DRSK++ GG +FVGN+PW T E+L F F P D HVKTNMAGRSRGFAI +F + E A+A+MN +++GR +QVRED+
Sbjct: 2 ENTDIYIGNLTWDTTDEELLEFLGSVGEVLNASVQRHADSQRSKGWGLATYAAPEGAALAVSQLDQSELKGRPVHVRFDRSKIENVGGVNIFVGNIPWEITSEQLYESFFPFQPIDVHVKTNMAGRSRGFAIAKFPNQELADAAVAQMNGKELQGRQLQVREDK 165
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A7S2GAK8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GAK8_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.330e-53 Identity = 89/168 (52.98%), Postives = 119/168 (70.83%), Query Frame = 3
Query: 504 IADTSTVFVGNLSWSTTNDDLREFMSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDREV 1007
+ T+T+FVGNL+WSTT++DL+++ + G+V+S EVQ HAD+GRSKGW LVTYS+ EA AI L + + RP+++R+DRS V+ GG VFVGNLPWSTT+E+L +F F P+D +VKT M GRSRGFAI+RF PE AI M +GR + VR DR +
Sbjct: 19 VPSTATLFVGNLAWSTTSEDLKKYCAAVGNVLSVEVQSHADTGRSKGWALVTYSTSEEAAVAITQLHGHDFNDRPLNVRVDRSNVEQMGGTLVFVGNLPWSTTNEQLLELFGQFNPFDVNVKTTMNGRSRGFAIVRFDTPERAEVAIGTMQGFIFEGRTLDVRIDRPL 186
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: K8YWK2_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWK2_NANGC) HSP 1 Score: 178 bits (451), Expect = 5.370e-51 Identity = 82/163 (50.31%), Postives = 112/163 (68.71%), Query Frame = 3
Query: 513 TSTVFVGNLSWSTTNDDLREFMSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDR 1001
+ TVFVGNLSW TT D L M AG V+ EVQ H+D+GRSKGW LVT+ + +A A++ L E++ RP+++R DR++++ GF VFVGNLPW T L +F++F PYD H+KTNM+GRSRGF +LRF E +RAI +M+ + ++ R I VR DR
Sbjct: 2 SKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 164
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Match: A0A4D9CR95_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR95_9STRA) HSP 1 Score: 151 bits (382), Expect = 2.110e-39 Identity = 69/142 (48.59%), Postives = 98/142 (69.01%), Query Frame = 3
Query: 576 MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRPVHIRLDRSKVDTSGGFAVFVGNLPWSTTDEELSAMFADFGPYDAHVKTNMAGRSRGFAILRFADPEAGRRAIAEMNNLQIKGRPIQVREDR 1001
M AG V+ EVQ H+D+GRSKGW LVT+ + +A A++ L E++ RP+++R DR++++ GF VFVGNLPW T L +F++F PYD H+KTNM+GRSRGF +LRF E +RAI +M+ + ++ R I VR DR
Sbjct: 1 METAGRVLDVEVQAHSDTGRSKGWALVTFEAAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFRPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 142 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6187.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6187.1.1 >prot_P-wetherbeei_contig6187.1.1 ID=prot_P-wetherbeei_contig6187.1.1|Name=mRNA_P-wetherbeei_contig6187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp MSRAGSVVSAEVQCHADSGRSKGWGLVTYSSPAEARAAIDTLTNAELDSRback to top mRNA from alignment at P-wetherbeei_contig6187:5..1804- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6187.1.1 ID=mRNA_P-wetherbeei_contig6187.1.1|Name=mRNA_P-wetherbeei_contig6187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1800bp|location=Sequence derived from alignment at P-wetherbeei_contig6187:5..1804- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6187:5..1804- >mRNA_P-wetherbeei_contig6187.1.1 ID=mRNA_P-wetherbeei_contig6187.1.1|Name=mRNA_P-wetherbeei_contig6187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig6187:5..1804- (Phaeothamnion wetherbeei SAG_119_79)back to top |