mRNA_P-wetherbeei_contig59272.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Match: UPI001F1550D2 (ATP-binding cassette domain-containing protein n=1 Tax=unclassified Nocardioides TaxID=2615069 RepID=UPI001F1550D2) HSP 1 Score: 260 bits (665), Expect = 1.290e-84 Identity = 132/162 (81.48%), Postives = 148/162 (91.36%), Query Frame = 1
Query: 7 SLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEAATRQVKHYSGGMRRRIDIAASLVVTPDLIFLDEPTTGLDPRSRNQVWDIVRTLVAAGTTVLLTTQYLEEADQLADRIAVIDRGKVIAEGTTGELKASVGAGSLHVRLSDASCR 492
+LTGQFASLDEDLTGLENLTLL+R++GYR ARRRA +LL AFDL++AA RQVK YSGGMRRRID+A SLVV PDLIFLDEPTTGLDPRSRNQVW+IVR LV AGTTVLLTTQYLEEADQLADRIAVID G+VIAEGT+GELKASVG+G+LHVR++D + R
Sbjct: 81 ALTGQFASLDEDLTGLENLTLLARMYGYRAAAARRRAAELLEAFDLADAAKRQVKAYSGGMRRRIDVAGSLVVRPDLIFLDEPTTGLDPRSRNQVWEIVRALVGAGTTVLLTTQYLEEADQLADRIAVIDHGRVIAEGTSGELKASVGSGALHVRVADPATR 242
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Match: A0A8A4Z928_9MICO (ATP-binding cassette domain-containing protein n=1 Tax=Pengzhenrongella sicca TaxID=2819238 RepID=A0A8A4Z928_9MICO) HSP 1 Score: 260 bits (664), Expect = 2.200e-84 Identity = 130/165 (78.79%), Postives = 148/165 (89.70%), Query Frame = 1
Query: 1 RGSLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEAATRQVKHYSGGMRRRIDIAASLVVTPDLIFLDEPTTGLDPRSRNQVWDIVRTLVAAGTTVLLTTQYLEEADQLADRIAVIDRGKVIAEGTTGELKASVGAGSLHVRLSDASCRP 495
R SLTGQFAS+DEDLTG ENL LLSRLWGY P AR+RAGDLL AF L++A RQVK+YSGGMRRR+DIAAS+VVTPDLIFLDEPT+GLDPRSRNQVW+I+R +VA GTTVLLTTQYL+EADQLADRIAV+D G+VIAEGT+ ELKASVG+G+LHVRL D + RP
Sbjct: 82 RVSLTGQFASVDEDLTGFENLVLLSRLWGYSRPAARQRAGDLLDAFGLADARDRQVKNYSGGMRRRLDIAASIVVTPDLIFLDEPTSGLDPRSRNQVWEIIRAMVAGGTTVLLTTQYLDEADQLADRIAVVDHGRVIAEGTSSELKASVGSGALHVRLLDPAQRP 246
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Match: A0A7J9WK09_9ACTN (ATP-binding cassette domain-containing protein n=1 Tax=Nitriliruptorales bacterium TaxID=2497630 RepID=A0A7J9WK09_9ACTN) HSP 1 Score: 260 bits (665), Expect = 2.700e-84 Identity = 133/165 (80.61%), Postives = 147/165 (89.09%), Query Frame = 1
Query: 1 RGSLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEAATRQVKHYSGGMRRRIDIAASLVVTPDLIFLDEPTTGLDPRSRNQVWDIVRTLVAAGTTVLLTTQYLEEADQLADRIAVIDRGKVIAEGTTGELKASVGAGSLHVRLSDASCRP 495
R S+TGQFAS+DEDLTG ENL LL RLWGYR P+AR RAG+LL AF L++A+ RQVK YSGGMRRRIDIAAS+VVTP+LIFLDEPTTGLDPRSRN VWDIVR LVA+GTTVLLTTQYL+EADQLADRIAVIDRGKVIAEGT+ +LKASVG+G LHVRL D RP
Sbjct: 94 RVSMTGQFASVDEDLTGFENLLLLCRLWGYRRPDARARAGELLDAFGLADASDRQVKKYSGGMRRRIDIAASIVVTPELIFLDEPTTGLDPRSRNYVWDIVRALVASGTTVLLTTQYLDEADQLADRIAVIDRGKVIAEGTSSQLKASVGSGVLHVRLLDPDQRP 258
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Match: A0A6N9YKG1_9ACTN (ATP-binding cassette domain-containing protein n=2 Tax=Phytoactinopolyspora alkaliphila TaxID=1783498 RepID=A0A6N9YKG1_9ACTN) HSP 1 Score: 258 bits (660), Expect = 8.610e-84 Identity = 131/166 (78.92%), Postives = 148/166 (89.16%), Query Frame = 1
Query: 1 RGSLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEAATRQVKHYSGGMRRRIDIAASLVVTPDLIFLDEPTTGLDPRSRNQVWDIVRTLVAAGTTVLLTTQYLEEADQLADRIAVIDRGKVIAEGTTGELKASVGAGSLHVRLSDASCRPA 498
R SLTGQFAS+DEDLTG ENL LLSRL GY P++R RA DLL AF L++AA RQVK YSGGMRRRID+AAS+V TPD++FLDEPTTGLDPRSRNQVWDIVR LVA+GTTVLLTTQYL+EADQLADRIAVID GKVIAEGT+G+LKASVG+G++H+RL DA RPA
Sbjct: 83 RVSLTGQFASVDEDLTGFENLVLLSRLLGYSKPQSRARATDLLDAFGLADAAERQVKKYSGGMRRRIDLAASIVATPDVLFLDEPTTGLDPRSRNQVWDIVRVLVASGTTVLLTTQYLDEADQLADRIAVIDHGKVIAEGTSGQLKASVGSGAVHIRLRDAGTRPA 248
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Match: A0A541B1W4_9NOCA (ATP-binding cassette domain-containing protein n=1 Tax=Rhodococcus spelaei TaxID=2546320 RepID=A0A541B1W4_9NOCA) HSP 1 Score: 258 bits (660), Expect = 9.160e-84 Identity = 130/164 (79.27%), Postives = 149/164 (90.85%), Query Frame = 1
Query: 7 SLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEAATRQVKHYSGGMRRRIDIAASLVVTPDLIFLDEPTTGLDPRSRNQVWDIVRTLVAAGTTVLLTTQYLEEADQLADRIAVIDRGKVIAEGTTGELKASVGAGSLHVRLSDASCRPA 498
SLTGQFASLDEDLTG ENL LL+RL+G+ P AR RA LL AFDLSEA +RQVK++SGGMRRR+DIAAS++VTP+LIFLDEPTTGLDPRSRNQVW+IVR LVA GTTVLLTTQYL+EADQLADR+AVID G+VIAEGTTGELKASVG+G+LHVR++D + RPA
Sbjct: 84 SLTGQFASLDEDLTGTENLVLLARLYGFSRPAARSRAEQLLAAFDLSEAGSRQVKNFSGGMRRRLDIAASIIVTPELIFLDEPTTGLDPRSRNQVWEIVRALVAGGTTVLLTTQYLDEADQLADRVAVIDHGRVIAEGTTGELKASVGSGALHVRVADPAKRPA 247
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Match: A0A1Q9U4Z4_9NOCA (Daunorubicin/doxorubicin resistance ABC transporter ATP-binding protein DrrA n=2 Tax=unclassified Rhodococcus TaxID=192944 RepID=A0A1Q9U4Z4_9NOCA) HSP 1 Score: 258 bits (659), Expect = 1.080e-83 Identity = 134/164 (81.71%), Postives = 146/164 (89.02%), Query Frame = 1
Query: 7 SLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEAATRQVKHYSGGMRRRIDIAASLVVTPDLIFLDEPTTGLDPRSRNQVWDIVRTLVAAGTTVLLTTQYLEEADQLADRIAVIDRGKVIAEGTTGELKASVGAGSLHVRLSDASCRPA 498
SLTGQFASLDEDLTG ENL LL+RL+GY P AR RA +LLTAF ++EA RQVK YSGGMRRRIDIAAS++VTP+LIFLDEPTTGLDPRSRNQVWDIVR LV GTTVLLTTQYL+EADQLA RIAVIDRGKVIAEGTTGELKASVG+GSLHVR+ +AS R A
Sbjct: 82 SLTGQFASLDEDLTGTENLILLARLYGYSRPAARSRADELLTAFGIAEAGNRQVKTYSGGMRRRIDIAASIIVTPELIFLDEPTTGLDPRSRNQVWDIVRALVDGGTTVLLTTQYLDEADQLAGRIAVIDRGKVIAEGTTGELKASVGSGSLHVRVVEASMRAA 245
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Match: A0A0A0BKJ7_9CELL (Caunorubicin/doxorubicin resistance ATP-binding protein n=1 Tax=Cellulomonas carbonis T26 TaxID=947969 RepID=A0A0A0BKJ7_9CELL) HSP 1 Score: 256 bits (654), Expect = 6.170e-83 Identity = 129/156 (82.69%), Postives = 144/156 (92.31%), Query Frame = 1
Query: 7 SLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEAATRQVKHYSGGMRRRIDIAASLVVTPDLIFLDEPTTGLDPRSRNQVWDIVRTLVAAGTTVLLTTQYLEEADQLADRIAVIDRGKVIAEGTTGELKASVGAGSLHVRL 474
S+TGQFAS+DEDLTG ENL LLSRLWG+ P AR RA +LL AF L++AA RQVK +SGGMRRRIDIAAS++VTPDLIFLDEPTTGLDPRSRNQVWDIVR LVAAGTTVLLTTQYL+EADQLA+RIAVIDRGKVIAEGT+G+LKASVG+G+LHVRL
Sbjct: 81 SMTGQFASVDEDLTGRENLVLLSRLWGFTRPAARARADELLAAFGLADAADRQVKKFSGGMRRRIDIAASIIVTPDLIFLDEPTTGLDPRSRNQVWDIVRELVAAGTTVLLTTQYLDEADQLAERIAVIDRGKVIAEGTSGQLKASVGSGALHVRL 236
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Match: UPI000934FE46 (ATP-binding cassette domain-containing protein n=1 Tax=Rhodococcus yunnanensis TaxID=278209 RepID=UPI000934FE46) HSP 1 Score: 256 bits (654), Expect = 6.570e-83 Identity = 131/164 (79.88%), Postives = 147/164 (89.63%), Query Frame = 1
Query: 7 SLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEAATRQVKHYSGGMRRRIDIAASLVVTPDLIFLDEPTTGLDPRSRNQVWDIVRTLVAAGTTVLLTTQYLEEADQLADRIAVIDRGKVIAEGTTGELKASVGAGSLHVRLSDASCRPA 498
SLTGQFASLDEDLTG+ENL LL+RL+GY P AR RA +LL AF +++A +RQVK YSGGMRRR+DIAAS++VTP+LIFLDEPTTGLDPRSRNQVWDIVR LVA GTTVLLTTQYL+EADQLA RIAVIDRGKVIAEGTTGELKASVG+GSLHVR+ D + R A
Sbjct: 82 SLTGQFASLDEDLTGIENLVLLARLYGYSRPAARSRAEELLAAFGIADAGSRQVKTYSGGMRRRVDIAASIIVTPELIFLDEPTTGLDPRSRNQVWDIVRALVAGGTTVLLTTQYLDEADQLAGRIAVIDRGKVIAEGTTGELKASVGSGSLHVRVLDPARRSA 245
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Match: UPI001E58CA53 (ATP-binding cassette domain-containing protein n=1 Tax=Aeromicrobium sp. Leaf350 TaxID=2876565 RepID=UPI001E58CA53) HSP 1 Score: 256 bits (653), Expect = 8.480e-83 Identity = 129/160 (80.62%), Postives = 144/160 (90.00%), Query Frame = 1
Query: 1 RGSLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEAATRQVKHYSGGMRRRIDIAASLVVTPDLIFLDEPTTGLDPRSRNQVWDIVRTLVAAGTTVLLTTQYLEEADQLADRIAVIDRGKVIAEGTTGELKASVGAGSLHVRLSD 480
R ++TGQFASLDEDLTGLENL +L++L+GYRG AR RA LL AFDL+EA T+QVK YSGGMRRRIDIA S+VV PDL+FLDEPTTGLDPRSRNQVWDIVR LV AGTTVLLTTQYL+EADQLADRIAVIDRGKVIAEGTTGELKASVG G+L +R++D
Sbjct: 79 RVAMTGQFASLDEDLTGLENLVMLAKLYGYRGTAARDRADQLLDAFDLTEAGTKQVKSYSGGMRRRIDIAGSIVVRPDLMFLDEPTTGLDPRSRNQVWDIVRALVGAGTTVLLTTQYLDEADQLADRIAVIDRGKVIAEGTTGELKASVGTGALRIRVAD 238
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Match: A0A164LKZ2_9NOCA (Caunorubicin/doxorubicin resistance ATP-binding protein n=9 Tax=Nocardiaceae TaxID=85025 RepID=A0A164LKZ2_9NOCA) HSP 1 Score: 256 bits (653), Expect = 8.750e-83 Identity = 131/158 (82.91%), Postives = 143/158 (90.51%), Query Frame = 1
Query: 7 SLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEAATRQVKHYSGGMRRRIDIAASLVVTPDLIFLDEPTTGLDPRSRNQVWDIVRTLVAAGTTVLLTTQYLEEADQLADRIAVIDRGKVIAEGTTGELKASVGAGSLHVRLSD 480
SLTGQFASLDEDLTG ENL LL+RL+GY P AR RA +LL+AF +++A RQVK YSGGMRRRIDIAAS++VTP+LIFLDEPTTGLDPRSRNQVWDIVR LVA GTTVLLTTQYL+EADQLA RIAVIDRGKVIAEGTTGELKASVGAGSLHVR+ D
Sbjct: 82 SLTGQFASLDEDLTGTENLVLLARLYGYSRPSARSRADELLSAFGIADAGGRQVKTYSGGMRRRIDIAASIIVTPELIFLDEPTTGLDPRSRNQVWDIVRALVAGGTTVLLTTQYLDEADQLAGRIAVIDRGKVIAEGTTGELKASVGAGSLHVRVVD 239 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59272.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig59272.1.1 >prot_P-wetherbeei_contig59272.1.1 ID=prot_P-wetherbeei_contig59272.1.1|Name=mRNA_P-wetherbeei_contig59272.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp RGSLTGQFASLDEDLTGLENLTLLSRLWGYRGPEARRRAGDLLTAFDLSEback to top mRNA from alignment at P-wetherbeei_contig59272:3..500+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig59272.1.1 ID=mRNA_P-wetherbeei_contig59272.1.1|Name=mRNA_P-wetherbeei_contig59272.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig59272:3..500+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig59272:3..500+ >mRNA_P-wetherbeei_contig59272.1.1 ID=mRNA_P-wetherbeei_contig59272.1.1|Name=mRNA_P-wetherbeei_contig59272.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig59272:3..500+ (Phaeothamnion wetherbeei SAG_119_79)back to top |