mRNA_P-wetherbeei_contig59261.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Match: UPI001C3C5BA0 (flagellar basal body rod protein FlgB n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3C5BA0) HSP 1 Score: 184 bits (467), Expect = 1.210e-57 Identity = 96/136 (70.59%), Postives = 113/136 (83.09%), Query Frame = 1
Query: 4 MFPDDLTTEVLSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQAVETDRASLNRDPGSLTAFDSGAGRAIDETGPNVMSVDTTAVRVDGSNVDPDDEMAQLSANELAHQTVVSLLDKRFSQFMTAITGH 411
MFPDDLTTEVL+ASLRGH+ARNAA+ NNIANAETPGYKR+DV FE+ALA+AV++DR + R ++F AG ++ + P+V SV TT +RVDGSNVD DDEMAQLSAN+LAHQTVVSLLDKRFSQF TAITG
Sbjct: 1 MFPDDLTTEVLTASLRGHDARNAALVNNIANAETPGYKRIDVQFESALAEAVQSDRERIRRGSMGESSFLGAAGE-VEGSAPSVRSVGTTTMRVDGSNVDADDEMAQLSANQLAHQTVVSLLDKRFSQFRTAITGR 135
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Match: UPI001C3C8D16 (flagellar basal body rod protein FlgB n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3C8D16) HSP 1 Score: 155 bits (392), Expect = 3.120e-46 Identity = 81/136 (59.56%), Postives = 106/136 (77.94%), Query Frame = 1
Query: 4 MFPDDLTTEVLSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQAVETDRASLNRDPGSLTAFDSGAGRAIDETGPNVMSVDTTAVRVDGSNVDPDDEMAQLSANELAHQTVVSLLDKRFSQFMTAITGH 411
MF DLTTEVL+A+ RG++AR+ A+A+NIANAETPGYKR++V FE+ALA+AVE DR+ + R P + G A++ + P V S TT +RVDGSNVDPD EMA+L+AN+LAHQTVV++LDKRF+QF A+TG
Sbjct: 1 MFFGDLTTEVLTAAARGYDARHTALASNIANAETPGYKRIEVQFESALAKAVEDDRSRMGRGPATSLPSPFAQGDAVESSRPAVSSSGTT-MRVDGSNVDPDAEMAELAANQLAHQTVVAMLDKRFTQFRMAVTGR 135
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Match: A0A2M7T7G7_9ACTN (Flagellar basal body rod protein FlgB n=1 Tax=Candidatus Aquicultor secundus TaxID=1973895 RepID=A0A2M7T7G7_9ACTN) HSP 1 Score: 84.3 bits (207), Expect = 3.380e-18 Identity = 50/137 (36.50%), Postives = 71/137 (51.82%), Query Frame = 1
Query: 4 MFPDDLTTEVLSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQAVET--DRASLNRDPGSLTAFDSGAGRAIDETGPNVMSVDTTAVRVDGSNVDPDDEMAQLSANELAHQTVVSLLDKRFSQFMTAITG 408
+F +D T L L + IANN+AN TPGYK+ DVSFE QA++ D L DP L G ++ G V +V T++R DG+NVD D+EM++L+ N + + + L+ R S T I G
Sbjct: 5 LFSND-TFVALQKGLDASSLKQQVIANNVANINTPGYKKQDVSFEDEFKQAIDNKYDAGMLQTDPRHLPG-----GSSLTSVGIKVTTVGATSMRYDGNNVDIDEEMSKLAENTIRYNAMAQLMSSRLSSLKTVING 135
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Match: UPI0019CC71B1 (flagellar basal body rod protein FlgB n=1 Tax=Alicyclobacillus cellulosilyticus TaxID=1003997 RepID=UPI0019CC71B1) HSP 1 Score: 83.2 bits (204), Expect = 9.550e-18 Identity = 54/133 (40.60%), Postives = 75/133 (56.39%), Query Frame = 1
Query: 19 LTTEV---LSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQAVETDRASLNRDPGSLTAFDSGAGRAIDETGPNVMSVDTTAVRVDGSNVDPDDEMAQLSANELAHQTVVSLLDKRFSQFMTAITG 408
LT++V L +L + R A ANNIANA+TPGY+RMDVSFE AL QA+ R++ DP L A +A+ + P + T V +G+NVD D EMAQL+ N++ + +V L F + I G
Sbjct: 3 LTSDVMALLQTALTAADMRQVAYANNIANADTPGYQRMDVSFEDALQQALGLTRSASPGDP--LAALTGADWQAVRQIQPTWVVAGGTLVDNNGNNVDLDAEMAQLATNQIRYNGLVQALRSDFDRLHAVIGG 133
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Match: UPI000368C73D (flagellar basal body rod protein FlgB n=1 Tax=Effusibacillus pohliae TaxID=232270 RepID=UPI000368C73D) HSP 1 Score: 82.4 bits (202), Expect = 1.950e-17 Identity = 48/139 (34.53%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 1 LMFPDDLTTEVLSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQAVETDRAS---LNRDPGSLTAFDSGAGRAIDETGPNVMSVDTTAVRVDGSNVDPDDEMAQLSANELAHQTVVSLLDKRFSQFMTAITG 408
+ F + + ++ +L R +ANNIAN +TP +KR D+SFE+ L +E A L DP + A R+I + P ++ ++TAV +G+NVD D EM QL+ N++ + VV L+ F++ TAI G
Sbjct: 1 MSFINTKSMQIYERTLDAASLRQKELANNIANVDTPNFKRSDISFESTLQAYLEQKNAPIQLLQTDPRHIPA----GPRSISQIQPEIIVENSTAVNNNGNNVDIDSEMTQLAVNQIKYNAVVQLISGHFNKLRTAIQG 135
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Match: A0A139CVE0_9FIRM (Flagellar basal body rod protein FlgB n=2 Tax=unclassified Candidatus Frackibacter TaxID=2648818 RepID=A0A139CVE0_9FIRM) HSP 1 Score: 82.0 bits (201), Expect = 2.560e-17 Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 1
Query: 22 TTEVLSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQAVETDRASLNR-DPGSLTAFDSGAGRAIDETGPNVMSVDTTAVRVDGSNVDPDDEMAQLSANELAHQTVVSLLDKRFSQFMTAI 402
TT +LS +L G + R+ AIANN+AN +TP YKR DV F++ L A+E D LN+ D LT I + P V + T++R D +NVD D EMA L+ N L +Q V LL +F I
Sbjct: 9 TTTILSKALDGIQLRHQAIANNLANVDTPEYKRRDVDFKSELKAALEQDDLKLNKTDNMHLTT-----NNKISQFKPKVQVENDTSMRNDKNNVDIDYEMAALAKNTLEYQAVTKLLSMKFKNLGNVI 131
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Match: A0A4Q1ZXX7_9FIRM (Flagellar basal body rod protein FlgB n=1 Tax=Fusibacter sp. A1 TaxID=2283630 RepID=A0A4Q1ZXX7_9FIRM) HSP 1 Score: 80.9 bits (198), Expect = 7.210e-17 Identity = 50/132 (37.88%), Postives = 76/132 (57.58%), Query Frame = 1
Query: 16 DLTTEVLSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQAVETDRASLNRD-PGSLTAFDSGAGRAIDETGPNVMSVDTTAVRVDGSNVDPDDEMAQLSANELAHQTVVSLLDKRFSQFMTAITG 408
DL + L AS R ++NNIAN TPGYKR DV FE L + R S+N PG +T SG +D P V++ + T++R+DG+NV+ D EMA+L+ N + + VV+ ++ + + +AI+G
Sbjct: 10 DLQKKALDASW----LRQDILSNNIANVNTPGYKRQDVEFENLLEDYLSGKRFSINATHPGHITDGFSG----LDSVRPRVITEENTSLRIDGNNVNVDTEMAELAKNSIKYNAVVTDVNSQLRRLKSAISG 133
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Match: UPI0002FEBA75 (flagellar basal body protein n=1 Tax=Zavarzinella formosa TaxID=360055 RepID=UPI0002FEBA75) HSP 1 Score: 79.7 bits (195), Expect = 1.280e-16 Identity = 48/132 (36.36%), Postives = 67/132 (50.76%), Query Frame = 1
Query: 16 DLTTEVLSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQAVETDRASLNRDPGSLTAFDSGAGRAIDETGPNVMSVDTTAVRVDGSNVDPDDEMAQLSANELAHQTVVSLLDKRFSQFMTAITGH 411
DL T V+ + H+ IANN+AN TPG+KR+ V FE L++A+E AG + P +++ DTTA RVDG+ VD D EM QLS N L + +L + +Q +AI G
Sbjct: 9 DLLTRVMDTAALRHKV----IANNVANVNTPGFKRLGVEFEQTLSKAIE-------------------AGTPVTSVSPTIVTDDTTAERVDGNTVDIDREMQQLSMNSLLYTAASQILANQLAQLRSAIAGR 117
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Match: A0A1T4MAC7_9FIRM (Flagellar basal body rod protein FlgB n=1 Tax=Selenihalanaerobacter shriftii TaxID=142842 RepID=A0A1T4MAC7_9FIRM) HSP 1 Score: 80.1 bits (196), Expect = 1.510e-16 Identity = 53/131 (40.46%), Postives = 74/131 (56.49%), Query Frame = 1
Query: 1 LMFPDDLTTEVLSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQA-VETDRASLNRDPGSLTAFD-SGAGRAIDETGPNVMSVDTTAVRVDGSNVDPDDEMAQLSANELAHQTVVSLLDKRFSQ 387
+ F D TT +LS++L G R AI+NNIAN +TP YKR DV+FE+ L QA R S+N F +G +A P + S + T++R D +NVD D EM L+ N L +Q+V LL +F +
Sbjct: 1 MAFLGDQTTSILSSALDGLSLRKQAISNNIANVDTPNYKRKDVNFESQLQQARYNYKRQSINLSRTDNEHFSINGKHQAF---APKIRSDNNTSMRNDKNNVDIDYEMTALAKNTLKYQSVTKLLSTKFKK 128
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Match: A0A1G2YVF4_9BACT (Flagellar basal body rod protein FlgB n=1 Tax=Planctomycetes bacterium RBG_13_60_9 TaxID=1801963 RepID=A0A1G2YVF4_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 1.770e-16 Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 7 FPDDLTTEVLSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQAVETDRASLNRDPGSLTAFDSGAGRAIDETGPNVMSVDTTAVRVDGSNVDPDDEMAQLSANELAHQTVVSLLDKRFSQFMTAI 402
P+ T ++L A +R E R IA+NIAN ETPGY+R+DV FE LA+A++ PG + +D P + + A++ +G+NV + E+ L L H T V LL K+FSQ AI
Sbjct: 1 MPEPSTIDLLQAGIRAEELRQKTIASNIANVETPGYRRVDVKFERLLAKALDC--------PGRID---------LDRFEPELYRPNDPALKSNGNNVSMEAEIGDLVRTSLRHTTYVRLLHKKFSQIQAAI 115 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59261.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig59261.1.1 >prot_P-wetherbeei_contig59261.1.1 ID=prot_P-wetherbeei_contig59261.1.1|Name=mRNA_P-wetherbeei_contig59261.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MFPDDLTTEVLSASLRGHEARNAAIANNIANAETPGYKRMDVSFEAALAQback to top mRNA from alignment at P-wetherbeei_contig59261:45..458+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig59261.1.1 ID=mRNA_P-wetherbeei_contig59261.1.1|Name=mRNA_P-wetherbeei_contig59261.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig59261:45..458+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig59261:45..458+ >mRNA_P-wetherbeei_contig59261.1.1 ID=mRNA_P-wetherbeei_contig59261.1.1|Name=mRNA_P-wetherbeei_contig59261.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig59261:45..458+ (Phaeothamnion wetherbeei SAG_119_79)back to top |