mRNA_P-wetherbeei_contig58736.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58736.1.1 vs. uniprot
Match: A0A3D4MG60_9PROT (Protein kinase domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D4MG60_9PROT) HSP 1 Score: 70.1 bits (170), Expect = 5.250e-11 Identity = 46/155 (29.68%), Postives = 67/155 (43.23%), Query Frame = 1
Query: 22 LIDDDVKTRWSLAAITDWTNGRRPQIPQKRPSARRGSPLQIGPVQCLEPRELAYAIHRYPEPAATSLERGEIANWLKANDVQRAISLGIDEAGSNAAQAPPPVLLAREAVRLDPVGPIRYRDLSFFPNGAGSVIYAALLDGSRRQQFEELFTARL 486
++ DD RW+L W GRR Q R P + E R LA + +P +E+ + WLK N R + L ++ A ++A LDP P+RYRDLS FP G G+ + A+ G Q + EL + +L
Sbjct: 288 VLHDDEAARWNLEDAQRWLEGRRLSAKQPHNVMRARRPFVFRDRKYWELRTLAMDLAAHPSDTLALIEKDGLDLWLKRNFEDRDLELRLETFWKKEDGALRERVVAELVQALDPYAPVRYRDLSLFPQGFGTALADAMARGEDVQHYAELISLQL 442
BLAST of mRNA_P-wetherbeei_contig58736.1.1 vs. uniprot
Match: W6KC60_MAGSQ (Uncharacterized protein n=1 Tax=Magnetospira sp. (strain QH-2) TaxID=1288970 RepID=W6KC60_MAGSQ) HSP 1 Score: 67.8 bits (164), Expect = 3.320e-10 Identity = 53/157 (33.76%), Postives = 73/157 (46.50%), Query Frame = 1
Query: 1 LFDPVMALIDDDVKTRWSLAAITDWTNGRRPQIPQKRPSAR---RGSPLQIGPVQCLEPRELAYAIHRYPEPAATSLERGEIANWLKAN--DVQRAISLGID----EAGSNAAQAPPPVLLAREAVRLDPVGPIRYRDLSFFPNGAGSVIYAALLDG 444
L + + L+ DD W L + W +GRR Q P +R +A+ RG + L R LA+A R E A +L+ G + W+K + D + A EA Q L+A + LDP GPIRYR LSF P G G V ++DG
Sbjct: 270 LVEVLRGLLSDDPTEAWGLDELQAWIDGRR-QSPIQRKAAKKADRGFVFENHEYDNL--RTLAHAFARNQEAALKALKEGHVIRWIKRSLEDSEMAGXXXXXXXXLEATKGNRQRAEDALMANICIALDPEGPIRYRGLSFVPEGIGPVYAKEMIDG 423
BLAST of mRNA_P-wetherbeei_contig58736.1.1 vs. uniprot
Match: A0A8J2YST9_9PROT (Protein kinase domain-containing protein n=2 Tax=Aliidongia dinghuensis TaxID=1867774 RepID=A0A8J2YST9_9PROT) HSP 1 Score: 67.0 bits (162), Expect = 6.100e-10 Identity = 52/163 (31.90%), Postives = 74/163 (45.40%), Query Frame = 1
Query: 22 LIDDDVKTRWSLAAITDWTNGRR--PQIPQKRPSARRGSPLQIGPVQCLEPRELAYAIHRYPEPAATSLERGEIANWLKAN----DVQRAISLGIDEAGSNAAQAP--PPVLLAREAVRLDPVGPIRYRDLSFFPNGAGSVIYAALLDGSRRQQFEELFTARL 486
L+ D+ RW++ I W GRR P+ P P + R PL++G Q R A A+ R + A + + W++ A +L + +A NA A L AR LDP+GPIRYRDL+ P+G G V+ A + EL RL
Sbjct: 248 LLVDEPTERWTVREIDMWLQGRRMSPKSPTVPPRSAR--PLELGREQVFTARAAARALTRQGDQAVHLIRGHALEIWIQRTLGHKPTMDAFALAMADADDNAGNAGVHDARLTARVTTALDPLGPIRYRDLALVPDGFGCVLALAHTRSKDARPLVELLVGRL 408
BLAST of mRNA_P-wetherbeei_contig58736.1.1 vs. uniprot
Match: A0A7C1W2F3_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C1W2F3_9PROT) HSP 1 Score: 55.8 bits (133), Expect = 4.500e-6 Identity = 41/145 (28.28%), Postives = 68/145 (46.90%), Query Frame = 1
Query: 1 LFDPVMALIDDDVKTRWSLAAITDWTNGRRPQIPQKRPSARRGSPLQIGPVQCLEPRELAYAIHRYPEPAATSLERGEIANW----LKANDVQRAISLGIDEAGSNAAQAPP---PVLLAREAVRLDPVGPIRYRDLSFFPNGAG 414
L +P L+ D + RW L + W +G R Q++P+A+ +P + + R LA+A+ R A ++ + W LK ++ AI G+ E A P L+ R + LDP+ PIRY++L+ +G G
Sbjct: 260 LLEPSRGLMADTEEKRWGLEEMKSWISGNRQTPQQRKPAAKADTPFEFNGGEYTNARTLAWALFRNTGEALKVIKGKLLETWVRRGLKNPELGDAIE-GVVELAKIHASEPSGSDDSLICRICMILDPLAPIRYKELAINIDGFG 403
BLAST of mRNA_P-wetherbeei_contig58736.1.1 vs. uniprot
Match: A0A7V7E7J1_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7E7J1_9PROT) HSP 1 Score: 54.3 bits (129), Expect = 1.390e-5 Identity = 42/144 (29.17%), Postives = 67/144 (46.53%), Query Frame = 1
Query: 31 DDVKTRWSLAAITDWTNGRR--PQIPQKRPSARRGSPLQIGPVQCLEPRELAYAIHRYPEPAATSLERGEIANWLKAN----DVQRAISLGIDEAGSNAAQAPPPVLLAREAVRLDPVGPIRYRDLSFFPNGAGSVIYAALLDG 444
DD RW+ ++ W +GRR P + + A R G RELA A+ E A + G + WL+ + D A+ + G+ + P +L+A+ + LD PIRY+ LS P+G GS + A+++G
Sbjct: 31 DDPHERWNNESLDLWLSGRRLSPLVAKIEKRAARDFTFNNGNYSTA--RELAIAMALNWEAAVPYIIDGRLELWLRRSLDNKDKASAVGGVVGTVGTGDKRLPNDILVAKICMILDSGAPIRYKGLSVMPDGIGSFLALAMVEG 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58736.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58736.1.1 >prot_P-wetherbeei_contig58736.1.1 ID=prot_P-wetherbeei_contig58736.1.1|Name=mRNA_P-wetherbeei_contig58736.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp MALIDDDVKTRWSLAAITDWTNGRRPQIPQKRPSARRGSPLQIGPVQCLEback to top mRNA from alignment at P-wetherbeei_contig58736:8..493+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58736.1.1 ID=mRNA_P-wetherbeei_contig58736.1.1|Name=mRNA_P-wetherbeei_contig58736.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig58736:8..493+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58736:8..493+ >mRNA_P-wetherbeei_contig58736.1.1 ID=mRNA_P-wetherbeei_contig58736.1.1|Name=mRNA_P-wetherbeei_contig58736.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig58736:8..493+ (Phaeothamnion wetherbeei SAG_119_79)back to top |