mRNA_P-wetherbeei_contig58613.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Match: A0A7C5N167_9DELT (Four helix bundle protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7C5N167_9DELT) HSP 1 Score: 146 bits (368), Expect = 2.560e-43 Identity = 73/107 (68.22%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 1 MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAERWARESSRDTAHVLAIAHGSLADTEALLTRCEALGWFPAARTELLRSHLDGARRML 321
MHYR+L+VW +AM+ ARE YR VP LP+EET+GMR QITR+ VSIPANIAE W RESS+D AH LAIA GSLA+TE LLT CE LGWFP + T LR+ LD RML
Sbjct: 1 MHYRKLIVWDKAMETAREIYRLVPRLPKEETYGMRSQITRSVVSIPANIAEGWTRESSKDKAHFLAIAQGSLAETETLLTLCEDLGWFPVSETATLRNLLDEVSRML 107
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Match: A0A7V8VU65_9BACT (Four helix bundle protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7V8VU65_9BACT) HSP 1 Score: 146 bits (368), Expect = 2.560e-43 Identity = 74/107 (69.16%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 1 MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAERWARESSRDTAHVLAIAHGSLADTEALLTRCEALGWFPAARTELLRSHLDGARRML 321
MHYREL VW++AMD A+E YR PLLPREET+GMR QITRA SIPANIAE WARESSR+ A L+IA GSLA+TE LT CE +GWFPA TELLRS L +ML
Sbjct: 1 MHYRELTVWRKAMDLAKEVYRLAPLLPREETYGMRSQITRAAASIPANIAEGWARESSREKAQFLSIAQGSLAETETFLTLCEEIGWFPAKETELLRSLLTEVGKML 107
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Match: UPI001B8C1B11 (Four helix bundle protein n=1 Tax=Chloracidobacterium validum TaxID=2821543 RepID=UPI001B8C1B11) HSP 1 Score: 144 bits (362), Expect = 2.040e-42 Identity = 74/107 (69.16%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 1 MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAERWARESSRDTAHVLAIAHGSLADTEALLTRCEALGWFPAARTELLRSHLDGARRML 321
MHYRE M+WQ+AM AARE YR VP LPREET+GMR QITRA VSIPANIAE W RESS++ A LAIA GSLA+ E LLT CE LGWFP +T LR LD RML
Sbjct: 1 MHYRETMLWQKAMQAAREVYRLVPRLPREETYGMRSQITRAVVSIPANIAEGWTRESSKEKAQFLAIAQGSLAEVETLLTLCEDLGWFPPDQTRTLRGLLDEVSRML 107
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Match: A0A6I6EGC6_THETI (Four helix bundle protein n=1 Tax=Thermochromatium tepidum ATCC 43061 TaxID=316276 RepID=A0A6I6EGC6_THETI) HSP 1 Score: 140 bits (353), Expect = 5.240e-41 Identity = 67/108 (62.04%), Postives = 83/108 (76.85%), Query Frame = 1
Query: 1 MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAERWARESSRDTAHVLAIAHGSLADTEALLTRCEALGWFPAARTELLRSHLDGARRMLA 324
+HYRELMVWQ+AMD A+E YR P LP+EET+GMR QITRA S+PANIAE W RE+ +D AH LAIA GSLA+TE LLT CE LGWFP +T+ LR ++ ++L+
Sbjct: 3 LHYRELMVWQKAMDLAKEVYRLAPNLPKEETYGMRSQITRAATSVPANIAEGWTRETEKDRAHFLAIAQGSLAETETLLTLCEELGWFPVDKTQTLRGLMNETGKILS 110
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Match: A0A2A6RMF8_9CHLR (Uncharacterized protein n=1 Tax=Candidatus Viridilinea mediisalina TaxID=2024553 RepID=A0A2A6RMF8_9CHLR) HSP 1 Score: 134 bits (336), Expect = 2.150e-38 Identity = 67/107 (62.62%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 1 MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAERWARESSRDTAHVLAIAHGSLADTEALLTRCEALGWFPAARTELLRSHLDGARRML 321
MH++EL+VWQ+AM ARE YR VP LPREET+GMR QITRA VS+PANIAE WARESSR+ A LA+A GSLA+ E LL CE +GWFP TE L ++ R+L
Sbjct: 2 MHFKELIVWQKAMSIAREVYRLVPHLPREETYGMRSQITRAAVSVPANIAEGWARESSREKAQFLAVAQGSLAELETLLMLCEQIGWFPVKETEELHRLMNEVGRIL 108
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Match: A0A6B1DB71_9CHLR (Four helix bundle protein n=1 Tax=Caldilineaceae bacterium SB0661_bin_32 TaxID=2605255 RepID=A0A6B1DB71_9CHLR) HSP 1 Score: 133 bits (334), Expect = 3.840e-38 Identity = 67/107 (62.62%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 1 MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAERWARESSRDTAHVLAIAHGSLADTEALLTRCEALGWFPAARTELLRSHLDGARRML 321
M+YRE ++WQ+AM+AARE YR P LP E +GMR QITRA VSIPANIAE W RE+ +D AH LAIA GSLA+TE LLT CE LGWFP + T+ R LD R+L
Sbjct: 1 MYYRETILWQKAMEAAREIYRLTPRLPSTENYGMRSQITRAAVSIPANIAEGWTRETLKDKAHFLAIAQGSLAETETLLTLCEDLGWFPKSETKKFRGLLDEVSRIL 107
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Match: A0A1M7DUS8_9GAMM (Four helix bundle protein n=2 Tax=unclassified Rhodanobacter TaxID=2621553 RepID=A0A1M7DUS8_9GAMM) HSP 1 Score: 131 bits (330), Expect = 1.510e-37 Identity = 65/106 (61.32%), Postives = 77/106 (72.64%), Query Frame = 1
Query: 1 MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAERWARESSRDTAHVLAIAHGSLADTEALLTRCEALGWFPAARTELLRSHLDGARRM 318
MHYRE +VW RAM+ ARE YR LLPREE +GMR Q+TRA VS+P+NIAE W RES R+ A LAIA GS+A+ E +T CE LGWFP + TE +RS LD RM
Sbjct: 1 MHYREAVVWNRAMEVAREIYRLTALLPREEMYGMRSQLTRAAVSVPSNIAEGWTRESKREKAQFLAIAQGSVAELETQVTLCEQLGWFPESETEAVRSALDQVSRM 106
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Match: A0A163WBN8_9BACT (Uncharacterized protein n=1 Tax=Candidatus Fermentibacter daniensis TaxID=1729713 RepID=A0A163WBN8_9BACT) HSP 1 Score: 131 bits (330), Expect = 1.660e-37 Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAERWARESSRDTAHVLAIAHGSLADTEALLTRCEALGWFPAARTELLRSHLDGARRMLA 324
+HYREL VW++AM++A+E YR VP+LPREE +GMR QITRA S+PANIAE W RES ++ A L+IA GSLA+TE LT CE +GWFPA +T +R+ + +ML+
Sbjct: 3 LHYRELTVWRKAMESAKEIYRLVPMLPREEIYGMRSQITRAAASVPANIAEGWTRESEKERAQFLSIAQGSLAETETFLTLCEEIGWFPAEKTVCVRNLITEVSKMLS 110
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Match: A0A7L5YVE8_9CHLR (Four helix bundle protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7L5YVE8_9CHLR) HSP 1 Score: 130 bits (327), Expect = 4.460e-37 Identity = 68/107 (63.55%), Postives = 78/107 (72.90%), Query Frame = 1
Query: 1 MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAERWARESSRDTAHVLAIAHGSLADTEALLTRCEALGWFPAARTELLRSHLDGARRML 321
+HY+ L+VWQ+AM+AARE YR P LPREET+GMR QITR VS+PANIAE WARES R+ A LAIA LA+ E LLT CE +GWFP A T LR LD RML
Sbjct: 3 LHYKSLVVWQKAMEAAREVYRLAPRLPREETYGMRSQITRXMVSVPANIAEGWARESEREKAQFLAIAX-PLAEAETLLTLCEQVGWFPQAETRTLRGLLDEVGRML 108
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Match: UPI0018460CE9 (Four helix bundle protein n=1 Tax=Lysobacter sp. TaxID=72226 RepID=UPI0018460CE9) HSP 1 Score: 130 bits (326), Expect = 5.790e-37 Identity = 62/107 (57.94%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 1 MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAERWARESSRDTAHVLAIAHGSLADTEALLTRCEALGWFPAARTELLRSHLDGARRML 321
MHY++ +VW++AM A E YR PLLPREE +G+R Q+TRA VS+P NIAE W RES R+ AH LAIAHGSL++ E L+T CE +GWFP A+T R+ +D RML
Sbjct: 1 MHYKDAVVWKKAMTVASEIYRLAPLLPREEVYGIRSQLTRAAVSVPCNIAEGWTRESMREKAHFLAIAHGSLSELETLVTLCEEIGWFPIAQTRDPRAVIDETSRML 107 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58613.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58613.1.1 >prot_P-wetherbeei_contig58613.1.1 ID=prot_P-wetherbeei_contig58613.1.1|Name=mRNA_P-wetherbeei_contig58613.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp MHYRELMVWQRAMDAARETYRQVPLLPREETFGMRLQITRATVSIPANIAback to top mRNA from alignment at P-wetherbeei_contig58613:1..324- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58613.1.1 ID=mRNA_P-wetherbeei_contig58613.1.1|Name=mRNA_P-wetherbeei_contig58613.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig58613:1..324- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58613:1..324- >mRNA_P-wetherbeei_contig58613.1.1 ID=mRNA_P-wetherbeei_contig58613.1.1|Name=mRNA_P-wetherbeei_contig58613.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig58613:1..324- (Phaeothamnion wetherbeei SAG_119_79)back to top |