mRNA_P-wetherbeei_contig58085.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58085.1.1 vs. uniprot
Match: A0A836CBS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.870e-23 Identity = 56/110 (50.91%), Postives = 74/110 (67.27%), Query Frame = 1
Query: 1 MVHVGSIVVAIGMLLLLHAGHSTAHFRQFVVVAPGEGEARAADRPPLDAVVEAIGGFLISAIGVVWAAGKLHPIKGR---GKGMDSAQARPDFDMFQTRARSLRMRLAAM 321
MV +G+IV +G+L+LLHAG+S AH+RQF+V A GE A A D PPLDAVVE I GFL+ GVV AAG++ P++G G+ D+ + P F +F RA LR R A+
Sbjct: 1 MVKLGTIVAGLGLLVLLHAGYSAAHYRQFIVAAEGEA-APAEDAPPLDAVVETIVGFLLCVAGVVSAAGQMLPVRGPAGGGRSADAHEGLPGFAVFSHRAVQLRRRTQAL 109
BLAST of mRNA_P-wetherbeei_contig58085.1.1 vs. uniprot
Match: D8LTM7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM7_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 4.830e-21 Identity = 51/109 (46.79%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 1 MVHVGSIVVAIGMLLLLHAGHSTAHFRQFVVVAPGEGEARAADRPPLDAVVEAIGGFLISAIGVVWAAGKLHPIKGR---GKGMDSAQARPDFDMFQTRARSLRMRLAA 318
MVH+G++V A G+L+LLHAG+S AHF+QF + G D PLDA +EA+ GF + GV+++A L PIKG GK +DSA++ +F++F+ R RSLR R+A+
Sbjct: 1 MVHLGTVVSAAGLLILLHAGYSAAHFQQFKKPSSALGGG-GGDSAPLDAALEALVGFFVCVFGVLYSADALLPIKGAAGGGKSLDSAESTREFEVFEHRGRSLRRRVAS 108
BLAST of mRNA_P-wetherbeei_contig58085.1.1 vs. uniprot
Match: A0A5D6XQS2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQS2_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 3.230e-10 Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 13 GSIVVAIGMLLLLHAGHSTAHFRQFVVVAPGEGEARAADRPPLDAVVEAIGGFLISAIGVVWAAGKLHPIKGR----GKGMDSAQARPDFDMFQTRARSLRMRLAA 318
G + +AIG LLLLHAG+ + + ++V +A E A PP + V+E + F IS GV+ AG+L PI+ G+ + + + PDF +F R ++L R+AA
Sbjct: 5 GKLFIAIGSLLLLHAGYYSVKYAEYVKLA----EVTDAKLPPTEVVLELVLAFAISLAGVLVTAGELLPIRSNKRLHGRSLATVISSPDFHVFNHRGKALHKRIAA 106
BLAST of mRNA_P-wetherbeei_contig58085.1.1 vs. uniprot
Match: G4ZTE2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZTE2_PHYSP) HSP 1 Score: 61.6 bits (148), Expect = 4.560e-10 Identity = 34/104 (32.69%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 13 GSIVVAIGMLLLLHAGHSTAHFRQFVVVAPGEGEARAADRPPLDAVVEAIGGFLISAIGVVWAAGKLHPIKGR----GKGMDSAQARPDFDMFQTRARSLRMRL 312
G +++A+G LLL+HAG+ + + +V +A E A PP + VVE + FLIS +GV+ +G++ PI+ + + + + PDF +F R ++L R+
Sbjct: 5 GKLLIAVGALLLVHAGYYSVQYESYVKLA----ETADAQMPPFEVVVELVASFLISLVGVLLTSGEIMPIRSNDAMHSRSLATVVSSPDFYVFNHRGKALHKRI 104
BLAST of mRNA_P-wetherbeei_contig58085.1.1 vs. uniprot
Match: H3H2C3_PHYRM (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3H2C3_PHYRM) HSP 1 Score: 59.3 bits (142), Expect = 3.620e-9 Identity = 34/104 (32.69%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 13 GSIVVAIGMLLLLHAGHSTAHFRQFVVVAPGEGEARAADRPPLDAVVEAIGGFLISAIGVVWAAGKLHPIKGR----GKGMDSAQARPDFDMFQTRARSLRMRL 312
G +++A+G LLL+HAG+ + + +V + E A PP + VVE + FLIS +GV+ +G+L PI+ + + + + PDF +F R ++L R+
Sbjct: 5 GKLLIAVGALLLVHAGYYSVQYESYVKLT----ETADAQMPPFEVVVELVVSFLISLVGVLLTSGELLPIRSNDAMHSRSLATVISSPDFHVFNHRGKALHKRV 104
BLAST of mRNA_P-wetherbeei_contig58085.1.1 vs. uniprot
Match: W2HJX6_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HJX6_PHYPR) HSP 1 Score: 53.1 bits (126), Expect = 6.400e-7 Identity = 27/75 (36.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 1 MVHVGSIVVAIGMLLLLHAGHSTAHFRQFVVVAPGEGEARAADRPPLDAVVEAIGGFLISAIGVVWAAGKLHPIK 225
MV G +++A+G LLL+HAG+ + + +V + E A PP + VVE + FL+S +GV+ +G++ PI+
Sbjct: 1 MVFFGKLLIAVGTLLLVHAGYYSVQYESYVKLT----ETADAQMPPFEVVVELVAAFLVSLVGVLLTSGEILPIR 71
BLAST of mRNA_P-wetherbeei_contig58085.1.1 vs. uniprot
Match: A0A484EJ94_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EJ94_BRELC) HSP 1 Score: 51.6 bits (122), Expect = 3.520e-6 Identity = 34/105 (32.38%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 10 VGSIVVAIGMLLLLHAGHSTAHFRQFVVVAPGEGEARAADRPPLDAVVEAIGGFLISAIGVVWAAGKLHPIKG----RGKGMDSAQARPDFDMFQTRARSLRMRL 312
VG +++A+G LLL+HAG+ + + +V + E A PP + V+E F++S GV+ +G+L PI+ + + + S + PDF +F R +L RL
Sbjct: 4 VGKLLIAVGALLLVHAGYYSVQYEFYVKLT----ETVDAPMPPYEVVIELGIAFVLSLAGVLLTSGELLPIRSNDAMQSRALASMVSSPDFYVFNHRGAALHKRL 104
BLAST of mRNA_P-wetherbeei_contig58085.1.1 vs. uniprot
Match: A0A0W8CPY7_PHYNI (Membrane magnesium transporter 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CPY7_PHYNI) HSP 1 Score: 52.0 bits (123), Expect = 4.340e-6 Identity = 39/132 (29.55%), Postives = 64/132 (48.48%), Query Frame = 1
Query: 1 MVHVGSIVVAIGMLLLLHAGH----------------STAHFRQFVVV---APGEG-----EARAADRPPLDAVVEAIGGFLISAIGVVWAAGKLHPIKGR----GKGMDSAQARPDFDMFQTRARSLRMRL 312
MV G +++A+G LLL+HAG+ S +R+F V P E E A PP + VVE + FL+S +GV+ +G++ PI+ + + + + PDF +F R ++L R+
Sbjct: 1 MVFFGKLLIAVGTLLLVHAGYYSVQCTLLRFLFPTLSSCISYRRFDAVNSIQPDESYVKLTETADAQMPPFEVVVELVAAFLVSLVGVLLTSGEILPIRSNDALHSRSLATVISSPDFHVFNHRGKALHKRV 132
BLAST of mRNA_P-wetherbeei_contig58085.1.1 vs. uniprot
Match: A0A1W0A623_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A623_9STRA) HSP 1 Score: 49.3 bits (116), Expect = 2.580e-5 Identity = 35/103 (33.98%), Postives = 52/103 (50.49%), Query Frame = 1
Query: 19 IVVAIGMLLLLHAGHSTAHFRQFVVVAPGEGEARAADRPPLDAVVEAIGGFLISAIGVVWAAGKLHPIKG----RGKGMDSAQARPDFDMFQTRARSLRMRLA 315
++VAIG +LL+HAG+ T + +V +A E A PPL A +E FL +GV AG PI+ K D + P+F +F R + L+ + A
Sbjct: 5 LLVAIGAVLLVHAGYYTVQYEAYVKLA----EVSDASIPPLAAKLELAASFLFFLVGVASLAGDFVPIRSTEFFNNKSFDWVVSNPEFAVFNHRGKYLQKKKA 103 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58085.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58085.1.1 >prot_P-wetherbeei_contig58085.1.1 ID=prot_P-wetherbeei_contig58085.1.1|Name=mRNA_P-wetherbeei_contig58085.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp MVHVGSIVVAIGMLLLLHAGHSTAHFRQFVVVAPGEGEARAADRPPLDAVback to top mRNA from alignment at P-wetherbeei_contig58085:130..459- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58085.1.1 ID=mRNA_P-wetherbeei_contig58085.1.1|Name=mRNA_P-wetherbeei_contig58085.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig58085:130..459- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58085:130..459- >mRNA_P-wetherbeei_contig58085.1.1 ID=mRNA_P-wetherbeei_contig58085.1.1|Name=mRNA_P-wetherbeei_contig58085.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig58085:130..459- (Phaeothamnion wetherbeei SAG_119_79)back to top |